gene,0,0 GSM967508,0,0.048 GSM967509,0,0 GSM967510,0,0.044 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0 GSM967515,0,0 GSM967516,0,38.04 GSM967517,0,7.893 GSM967518,0,42.554 GSM967519,0,21.189 GSM967520,0,37.823 GSM967521,0,0.835 GSM967535,0,22.948 GSM967536,0,0 GSM967537,0,0 GSM967538,0,16.798 GSM967539,0,23.94 GSM967540,0,21.88 GSM967541,0,0 GSM967542,0,39.114 GSM967543,0,7.648 GSM967544,0,0 GSM967545,0,114.899 GSM967546,0,224.022 GSM967547,0,20.756 GSM967548,0,2.438 GSM967549,0,0.036 GSM967550,0,23.863 GSM967551,0,0.263 GSM967552,0,15.925 GSM967553,0,17.764 GSM967554,0,10.758 GSM967555,0,34.665 GSM967556,0,0.044 GSM967557,0,8.951
| Synonyms | ASM;ASMASE;NPD |
| Description | sphingomyelin phosphodiesterase 1 |
|---|---|
| Chromosome | 11p15.4-p15.1 |
| Database Reference | MIM:607608 HGNC:11120 HPRD:06353 Vega:OTTHUMG00000165453 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SMPD1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.048 |
| LNCaP cell | 0.835 | 29.506 | 42.554 |
| NG2-sorted cell from blood | 0 | 19.339 | 23.94 |
| PC3 cell | 0 | 3.824 | 39.114 |
| Primary melanocyte | 114.899 | 169.461 | 224.022 |
| SKMEL5 cell | 0.036 | 11.597 | 23.863 |
| T24 cell | 0.263 | 13.341 | 17.764 |
| UACC257 cell | 0.044 | 8.951 | 34.665 |
| Comparing SMPD1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 9.29881423119773e-05 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.000311102417442651 |
| Embryonic stem cell VS PC3 cell | 0.00486128035125241 |
| Embryonic stem cell VS Primary melanocyte | 0.0165703894474466 |
| Embryonic stem cell VS SKMEL5 cell | 0.00303648811360427 |
| Embryonic stem cell VS T24 cell | 0.00282745957756601 |
| Embryonic stem cell VS UACC257 cell | 0.0131671083877575 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
