gene,0,0 GSM967508,0,0.056 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0.063 GSM967514,0,0 GSM967515,0,0 GSM967516,0,6.675 GSM967517,0,0.046 GSM967518,0,0.061 GSM967519,0,43.753 GSM967520,0,0 GSM967521,0,63.737 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0.041 GSM967540,0,0 GSM967541,0,73.317 GSM967542,0,0 GSM967543,0,0 GSM967544,0,0 GSM967545,0,289.496 GSM967546,0,460.871 GSM967547,0,21.239 GSM967548,0,125.994 GSM967549,0,7.996 GSM967550,0,31.597 GSM967551,0,5.816 GSM967552,0,44.708 GSM967553,0,196.357 GSM967554,0,69.317 GSM967555,0,0 GSM967556,0,98.026 GSM967557,0,60.941
| Synonyms | SLUG;SLUGH1;SNAIL2;WS2D |
| Description | snail family transcriptional repressor 2 |
|---|---|
| Chromosome | 8q11 |
| Database Reference | MIM:602150 HGNC:11094 HPRD:03689 Vega:OTTHUMG00000149912 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SNAI2 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.063 |
| LNCaP cell | 0 | 3.368 | 63.737 |
| NG2-sorted cell from blood | 0 | 0 | 0.041 |
| PC3 cell | 0 | 0 | 73.317 |
| Primary melanocyte | 289.496 | 375.184 | 460.871 |
| SKMEL5 cell | 7.996 | 26.418 | 125.994 |
| T24 cell | 5.816 | 57.013 | 196.357 |
| UACC257 cell | 0 | 60.941 | 98.026 |
| Comparing SNAI2 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.000356316388721482 |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | 0.00548093722323711 |
| Embryonic stem cell VS Primary melanocyte | 0.0113771993452075 |
| Embryonic stem cell VS SKMEL5 cell | 0.00138069839446628 |
| Embryonic stem cell VS T24 cell | 0.000876205914509635 |
| Embryonic stem cell VS UACC257 cell | 0.00611012572198829 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | 0.0487718547441263 |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.040970260197588 |
| NG2-sorted cell from blood VS T24 cell | 0.020483749347251 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
