gene,0,0 GSM967508,0,31.984 GSM967509,0,52.78 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0 GSM967514,0,33.717 GSM967515,0,0 GSM967516,0,4.283 GSM967517,0,0.196 GSM967518,0,0.311 GSM967519,0,12.015 GSM967520,0,12.106 GSM967521,0,0 GSM967535,0,0.052 GSM967536,0,0.032 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0.035 GSM967540,0,0.04 GSM967541,0,0 GSM967542,0,17.84 GSM967543,0,0 GSM967544,0,24.486 GSM967545,0,0 GSM967546,0,0.058 GSM967547,0,0.552 GSM967548,0,14.433 GSM967549,0,0 GSM967550,0,23.313 GSM967551,0,16.322 GSM967552,0,0 GSM967553,0,3.085 GSM967554,0,3.53 GSM967555,0,0 GSM967556,0,0 GSM967557,0,0
| Synonyms | PMRED |
| Description | Smad nuclear interacting protein 1 |
|---|---|
| Chromosome | 1p34.3 |
| Database Reference | MIM:608241 HGNC:30587 HPRD:06999 Vega:OTTHUMG00000004225 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SNIP1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 52.78 |
| LNCaP cell | 0 | 2.297 | 12.106 |
| NG2-sorted cell from blood | 0 | 0.034 | 0.052 |
| PC3 cell | 0 | 8.92 | 24.486 |
| Primary melanocyte | 0 | 0.029 | 0.058 |
| SKMEL5 cell | 0 | 7.492 | 23.313 |
| T24 cell | 0 | 3.307 | 16.322 |
| UACC257 cell | 0 | 0 | 0 |
| Comparing SNIP1 expression between groups | FDR |
|---|---|
| PC3 cell VS T24 cell | NS |
| PC3 cell VS UACC257 cell | NS |
| Primary melanocyte VS SKMEL5 cell | NS |
| Primary melanocyte VS T24 cell | NS |
| Primary melanocyte VS UACC257 cell | NS |
| SKMEL5 cell VS T24 cell | NS |
| SKMEL5 cell VS UACC257 cell | NS |
| T24 cell VS UACC257 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
