gene,0,0 GSM967508,0,0.014 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0.013 GSM967513,0,0.015 GSM967514,0,0.028 GSM967515,0,0.047 GSM967516,0,0 GSM967517,0,3.69 GSM967518,0,0.043 GSM967519,0,0.009 GSM967520,0,0.011 GSM967521,0,0.084 GSM967535,0,0.28 GSM967536,0,0.606 GSM967537,0,14.592 GSM967538,0,0.556 GSM967539,0,2.544 GSM967540,0,0.542 GSM967541,0,0.012 GSM967542,0,0.029 GSM967543,0,0.026 GSM967544,0,0.013 GSM967545,0,0.597 GSM967546,0,16.082 GSM967547,0,9.861 GSM967548,0,33.923 GSM967549,0,31.555 GSM967550,0,18.274 GSM967551,0,0.031 GSM967552,0,0 GSM967553,0,0.033 GSM967554,0,0.011 GSM967555,0,15.686 GSM967556,0,2.601 GSM967557,0,0.02
| Synonyms | HSSOX6;SOXD |
| Description | SRY-box 6 |
|---|---|
| Chromosome | 11p15.3 |
| Database Reference | MIM:607257 HGNC:16421 HPRD:06267 Vega:OTTHUMG00000165876 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SOX6 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.014 | 0.047 |
| LNCaP cell | 0 | 0.027 | 3.69 |
| NG2-sorted cell from blood | 0.28 | 0.581 | 14.592 |
| PC3 cell | 0.012 | 0.02 | 0.029 |
| Primary melanocyte | 0.597 | 8.339 | 16.082 |
| SKMEL5 cell | 9.861 | 24.914 | 33.923 |
| T24 cell | 0 | 0.021 | 0.033 |
| UACC257 cell | 0.02 | 2.601 | 15.686 |
| Comparing SOX6 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.0207120416566614 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.00129684442850391 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | 0.014870163659672 |
| Embryonic stem cell VS SKMEL5 cell | 0.00014162789814267 |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | 0.00522055464218786 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | 0.00506059073467902 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
