gene,0,0 GSM967508,0,73.724 GSM967509,0,173.033 GSM967510,0,263.583 GSM967511,0,23.097 GSM967512,0,447.26 GSM967513,0,260.607 GSM967514,0,341.08 GSM967515,0,8.553 GSM967516,0,119.885 GSM967517,0,91.008 GSM967518,0,22.702 GSM967519,0,25.469 GSM967520,0,60.903 GSM967521,0,54.923 GSM967535,0,1398.588 GSM967536,0,325.095 GSM967537,0,1525.445 GSM967538,0,1833.435 GSM967539,0,1141.826 GSM967540,0,1690.501 GSM967541,0,175.304 GSM967542,0,606.718 GSM967543,0,304.203 GSM967544,0,29.499 GSM967545,0,2079.925 GSM967546,0,1569.933 GSM967547,0,769.065 GSM967548,0,1412.485 GSM967549,0,606.723 GSM967550,0,1094.232 GSM967551,0,44.986 GSM967552,0,51.859 GSM967553,0,83.851 GSM967554,0,65.703 GSM967555,0,1640.959 GSM967556,0,1274.894 GSM967557,0,1658.739
| Synonyms | CTRCT30;HEL113 |
| Description | vimentin |
|---|---|
| Chromosome | 10p13 |
| Database Reference | MIM:193060 HGNC:12692 HPRD:01899 Vega:OTTHUMG00000017744 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| VIM expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 8.553 | 216.82 | 447.26 |
| LNCaP cell | 22.702 | 57.913 | 119.885 |
| NG2-sorted cell from blood | 325.095 | 1,462.016 | 1,833.435 |
| PC3 cell | 29.499 | 239.753 | 606.718 |
| Primary melanocyte | 1,569.933 | 1,824.929 | 2,079.925 |
| SKMEL5 cell | 606.723 | 931.649 | 1,412.485 |
| T24 cell | 44.986 | 58.781 | 83.851 |
| UACC257 cell | 1,274.894 | 1,640.959 | 1,658.739 |
| Comparing VIM expression between groups | FDR |
|---|---|
| PC3 cell VS T24 cell | NS |
| PC3 cell VS UACC257 cell | NS |
| Primary melanocyte VS SKMEL5 cell | NS |
| Primary melanocyte VS T24 cell | NS |
| Primary melanocyte VS UACC257 cell | NS |
| SKMEL5 cell VS T24 cell | 0.00600420608836498 |
| SKMEL5 cell VS UACC257 cell | NS |
| T24 cell VS UACC257 cell | 0.0218651135664532 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
