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Gene View

General Information

VIM[ENSG00000026025]

SynonymsCTRCT30;HEL113
Descriptionvimentin
Chromosome10p13
Database ReferenceMIM:193060 HGNC:12692 HPRD:01899 Vega:OTTHUMG00000017744 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE72056

Gene Rank

Gene Expression

 

Displaying 1-8 of 8 results.
VIM expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
B-cell042.0653,006.643
CAF1,279.9765,174.28114,663.527
Endothelial cell1,7675,424.53416,091.73
Macrophage02,489.9416,628.438
melanoma204.7824,139.80639,227.027
melanoma tumor0695.46314,351.592
T-cell0549.2428,503.45
unresolved02,801.1617,199.626
Displaying 21-28 of 28 results.
Comparing VIM expression between groupsFDR
Macrophage VS melanoma5.94528338877621e-07
Macrophage VS unresolved0.0318400881450899
T-cell VS unresolved5.53823807180265e-25
melanoma tumor VS T-cell0.000199804202841722
melanoma tumor VS unresolved9.23130267258352e-08
melanoma VS T-cell1.31541248258652e-244
melanoma VS melanoma tumor2.30317452060649e-67
melanoma VS unresolvedNS
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for VIM

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 B-cell[326]
 CAF[39]
 Endothelial cell[40]
 Macrophage[42]
 melanoma[1071]
 melanoma tumor[246]
 T-cell[1302]
 unresolved[96]