gene,0,0 GSM967508,0,0 GSM967509,0,0.118 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0 GSM967515,0,0 GSM967516,0,0 GSM967517,0,0 GSM967518,0,0 GSM967519,0,0 GSM967520,0,0.193 GSM967521,0,0 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0 GSM967540,0,0 GSM967541,0,0 GSM967542,0,0 GSM967543,0,0 GSM967544,0,0 GSM967545,0,0 GSM967546,0,0 GSM967547,0,0 GSM967548,0,0 GSM967549,0,0 GSM967550,0,0 GSM967551,0,7.547 GSM967552,0,6.036 GSM967553,0,49.453 GSM967554,0,85.244 GSM967555,0,0 GSM967556,0,0 GSM967557,0,0
| Synonyms | SIRL-1;SIRL1;UNQ3033 |
| Description | V-set and transmembrane domain containing 1 |
|---|---|
| Chromosome | 19q13.42 |
| Database Reference | MIM:616804 HGNC:29455 HPRD:15615 Vega:OTTHUMG00000064906 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| VSTM1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.118 |
| LNCaP cell | 0 | 0 | 0.193 |
| NG2-sorted cell from blood | 0 | 0 | 0 |
| PC3 cell | 0 | 0 | 0 |
| Primary melanocyte | 0 | 0 | 0 |
| SKMEL5 cell | 0 | 0 | 0 |
| T24 cell | 6.036 | 28.5 | 85.244 |
| UACC257 cell | 0 | 0 | 0 |
| Comparing VSTM1 expression between groups | FDR |
|---|---|
| PC3 cell VS T24 cell | NS |
| PC3 cell VS UACC257 cell | NS |
| Primary melanocyte VS SKMEL5 cell | NS |
| Primary melanocyte VS T24 cell | NS |
| Primary melanocyte VS UACC257 cell | NS |
| SKMEL5 cell VS T24 cell | NS |
| SKMEL5 cell VS UACC257 cell | NS |
| T24 cell VS UACC257 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
