Gene: LMBR1

Basic information

Tag Content
Uniprot ID H0Y6V6
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSP00000408256
Ensembl nucleotide ID ENSG00000105983
Gene name Limb region 1 protein homolog
Gene symbol LMBR1
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
GQDEVSAREQ HFHSQVREST ICFLLFAILY VVSYFIITRY KRKSDEQEDE DAIVNRISLF 60
LSTFTLAVSA GAVLLLPFSI ISNEILLSFP QNYYIQWLNG SLIHGLWNLA SLFSNLCLFV 120
LMPFAFFFLE SEGFAGLKKG IRARILETLV MLLLLALLIL GIVWVASALI DNDAASMESL 180
YDLWEFYLPY LYSCISLMGC LLLLLCTPVG LSRMFTVMGQ LLVKPTILED LDEQIYIITL 240
EEEALQRRLN VGMLCAGNPE VATGRQVPEE QAGQLLLGKW IQEGGDMIAN PRLSSSVEYN 300
IMELEQELEN VKTLKTKLER RKKASAWERN LVYPAVMVLL LIETSISVLL VACNILCLLV 360
DETAMPKGTR GPGIGNASLS TFGFVGAALE IILIFYLMVS SVVGFYSLRF FGNFTPKKDD 420
TTMTKIIGNC VSILVLSSAL PVMSRTLGIT RFDLLGDFGR FNWLGNFYIV LSYNLLFAIV 480
TTLCLVRKFT SAVREELFKA LGLHKLHLPN TSRDSETAKP SVNGHQKAL 529

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologLMBR1482819A0A5F4D5K8Canis lupus familiarisPredictionMore>>
1:1 orthologLMBR1A0A452EMH0Capra hircusPredictionMore>>
1:1 orthologLMBR1H0Y6V6Homo sapiensPredictionMore>>
1:1 orthologLmbr156873Q9JIT0CPOMus musculusPublicationMore>>
1:1 orthologLMBR1739991H2QZM6Pan troglodytesPredictionMore>>
1:1 orthologLMBR1A0A287BKQ1Sus scrofaPredictionMore>>
1:1 orthologLMBR1100352265G1SF20Oryctolagus cuniculusPredictionMore>>
1:1 orthologLmbr1A0A0G2K4B6Rattus norvegicusPredictionMore>>

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence

GO:Biological Process

GO ID GO Term Evidence

GO:Cellular Component

GO ID GO Term Evidence

Reactome Pathway

Reactome ID Reactome Term Evidence

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0175 Coiled coil
KW-0472 Membrane
KW-1267 Proteomics identification
KW-1185 Reference proteome
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR008075 LIMR
IPR006876 LMBR1-like_membr_prot

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF04791 LMBR1

Protein-protein interaction

Protein-miRNA interaction