Gene: DVL2

Basic information

Tag Content
Uniprot ID O14641; D3DTN3; Q53XM0;
Entrez ID 1856
Genbank protein ID EAW90244.1; AAB65243.1; EAW90245.1; AAP88824.1; AAH14844.1;
Genbank nucleotide ID NM_004422.2
Ensembl protein ID ENSP00000005340
Ensembl nucleotide ID ENSG00000004975
Gene name Segment polarity protein dishevelled homolog DVL-2
Gene symbol DVL2
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type CL/P
Developmental stage
Data sources Manually collected
Reference 26602496; 22887353;
Functional description Plays a role in the signal transduction pathways mediated by multiple Wnt genes. Participates both in canonical and non-canonical Wnt signaling by binding to the cytoplasmic C-terminus of frizzled family members and transducing the Wnt signal to down-stream effectors. Promotes internalization and degradation of frizzled proteins upon Wnt signaling.
Sequence
MAGSSTGGGG VGETKVIYHL DEEETPYLVK IPVPAERITL GDFKSVLQRP AGAKYFFKSM 60
DQDFGVVKEE ISDDNARLPC FNGRVVSWLV SSDNPQPEMA PPVHEPRAEL APPAPPLPPL 120
PPERTSGIGD SRPPSFHPNV SSSHENLEPE TETESVVSLR RERPRRRDSS EHGAGGHRTG 180
GPSRLERHLA GYESSSTLMT SELESTSLGD SDEEDTMSRF SSSTEQSSAS RLLKRHRRRR 240
KQRPPRLERT SSFSSVTDST MSLNIITVTL NMEKYNFLGI SIVGQSNERG DGGIYIGSIM 300
KGGAVAADGR IEPGDMLLQV NDMNFENMSN DDAVRVLRDI VHKPGPIVLT VAKCWDPSPQ 360
AYFTLPRNEP IQPIDPAAWV SHSAALTGTF PAYPGSSSMS TITSGSSLPD GCEGRGLSVH 420
TDMASVTKAM AAPESGLEVR DRMWLKITIP NAFLGSDVVD WLYHHVEGFP ERREARKYAS 480
GLLKAGLIRH TVNKITFSEQ CYYVFGDLSG GCESYLVNLS LNDNDGSSGA SDQDTLAPLP 540
GATPWPLLPT FSYQYPAPHP YSPQPPPYHE LSSYTYGGGS ASSQHSEGSR SSGSTRSDGG 600
AGRTGRPEER APESKSGSGS ESEPSSRGGS LRRGGEASGT SDGGPPPSRG STGGAPNLRA 660
HPGLHPYGPP PGMALPYNPM MVVMMPPPPP PVPPAVQPPG APPVRDLGSV PPELTASRQS 720
FHMAMGNPSE FFVDVM 736

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologDVL2A0A452G485Capra hircusPredictionMore>>
1:1 orthologDVL21856O14641CL/PHomo sapiensPublicationMore>>
1:1 orthologDvl213543Q60838Mus musculusPredictionMore>>
1:1 orthologDVL2455236H2QC24Pan troglodytesPredictionMore>>
1:1 orthologDVL2A0A287AJQ6Sus scrofaPredictionMore>>
1:1 orthologDvl2303251D3ZB71Rattus norvegicusPredictionMore>>
1:1 orthologdvl2F1QM97Danio rerioPredictionMore>>

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
DVL2rs35594616; p.Gln554Gln PCR-RFLP22887353
DVL2rs222850*CGenotyping26602496

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0005109 frizzled bindingIPI
GO:0005109 frizzled bindingIBA
GO:0005109 frizzled bindingTAS
GO:0005515 protein bindingIPI
GO:0019901 protein kinase bindingIEA
GO:0019904 protein domain specific bindingIEA
GO:0030674 protein binding, bridgingIEA
GO:0042802 identical protein bindingIPI
GO:0043621 protein self-associationIEA
GO:0048365 Rac GTPase bindingIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0001843 neural tube closureISS
GO:0001934 positive regulation of protein phosphorylationIMP
GO:0003151 outflow tract morphogenesisISS
GO:0006366 transcription by RNA polymerase IIIDA
GO:0007379 segment specificationISS
GO:0007507 heart developmentISS
GO:0022007 convergent extension involved in neural plate elongationIEA
GO:0034613 cellular protein localizationIEA
GO:0035329 hippo signalingTAS
GO:0035567 non-canonical Wnt signaling pathwayIMP
GO:0035567 non-canonical Wnt signaling pathwayTAS
GO:0043507 positive regulation of JUN kinase activityIDA
GO:0043507 positive regulation of JUN kinase activityIMP
GO:0043547 positive regulation of GTPase activityIEA
GO:0044340 canonical Wnt signaling pathway involved in regulation of cell proliferationIDA
GO:0045893 positive regulation of transcription, DNA-templatedIDA
GO:0051091 positive regulation of DNA-binding transcription factor activityIDA
GO:0060070 canonical Wnt signaling pathwayIDA
GO:0060070 canonical Wnt signaling pathwayIBA
GO:0060070 canonical Wnt signaling pathwayTAS
GO:0060071 Wnt signaling pathway, planar cell polarity pathwayIDA
GO:0060071 Wnt signaling pathway, planar cell polarity pathwayNAS
GO:0060071 Wnt signaling pathway, planar cell polarity pathwayTAS
GO:0061024 membrane organizationTAS
GO:0061098 positive regulation of protein tyrosine kinase activityIEA
GO:0090090 negative regulation of canonical Wnt signaling pathwayTAS
GO:0090103 cochlea morphogenesisIEA
GO:0090179 planar cell polarity pathway involved in neural tube closureIBA
GO:0150012 positive regulation of neuron projection arborizationISS
GO:1904886 beta-catenin destruction complex disassemblyTAS

GO:Cellular Component

GO ID GO Term Evidence
GO:0005634 nucleusISS
GO:0005654 nucleoplasmIDA
GO:0005737 cytoplasmIDA
GO:0005829 cytosolIBA
GO:0005829 cytosolTAS
GO:0016235 aggresomeIDA
GO:0016328 lateral plasma membraneIEA
GO:0016604 nuclear bodyIDA
GO:0031410 cytoplasmic vesicleIDA
GO:0045177 apical part of cellIEA
GO:0045334 clathrin-coated endocytic vesicleTAS

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-162582 Signal TransductionTAS
R-HSA-162582 Signal TransductionIEA
R-HSA-194315 Signaling by Rho GTPasesTAS
R-HSA-195258 RHO GTPase EffectorsTAS
R-HSA-195721 Signaling by WNTTAS
R-HSA-195721 Signaling by WNTIEA
R-HSA-199991 Membrane TraffickingTAS
R-HSA-201681 TCF dependent signaling in response to WNTTAS
R-HSA-201681 TCF dependent signaling in response to WNTIEA
R-HSA-201688 WNT mediated activation of DVLTAS
R-HSA-2028269 Signaling by HippoTAS
R-HSA-3858494 Beta-catenin independent WNT signalingTAS
R-HSA-3858494 Beta-catenin independent WNT signalingIEA
R-HSA-4086400 PCP/CE pathwayTAS
R-HSA-4086400 PCP/CE pathwayIEA
R-HSA-4608870 Asymmetric localization of PCP proteinsTAS
R-HSA-4641258 Degradation of DVLTAS
R-HSA-4641262 Disassembly of the destruction complex and recruitment of AXIN to the membraneTAS
R-HSA-4641262 Disassembly of the destruction complex and recruitment of AXIN to the membraneIEA
R-HSA-5099900 WNT5A-dependent internalization of FZD4TAS
R-HSA-5368598 Negative regulation of TCF-dependent signaling by DVL-interacting proteinsIEA
R-HSA-5653656 Vesicle-mediated transportTAS
R-HSA-5663220 RHO GTPases Activate ForminsTAS
R-HSA-8856825 Cargo recognition for clathrin-mediated endocytosisTAS
R-HSA-8856828 Clathrin-mediated endocytosisTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-1003 Cell membrane
KW-0963 Cytoplasm
KW-0968 Cytoplasmic vesicle
KW-0217 Developmental protein
KW-0472 Membrane
KW-0539 Nucleus
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0879 Wnt signaling pathway

Interpro

InterPro ID InterPro Term
IPR000591 DEP_dom
IPR024580 Dishevelled_C-dom
IPR008339 Dishevelled_fam
IPR003351 Dishevelled_protein_dom
IPR001158 DIX
IPR038207 DIX_dom_sf
IPR015506 Dsh/Dvl-rel
IPR008341 DVL2
IPR001478 PDZ
IPR036034 PDZ_sf
IPR029071 Ubiquitin-like_domsf
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf

PROSITE

PROSITE ID PROSITE Term
PS50186 DEP
PS50841 DIX
PS50106 PDZ

Pfam

Pfam ID Pfam Term
PF00610 DEP
PF02377 Dishevelled
PF00778 DIX
PF12316 Dsh_C
PF00595 PDZ

Protein-protein interaction

Protein-miRNA interaction