Gene: FOXP2

Basic information

Tag Content
Uniprot ID O15409; A0AUV6; A4D0U8; A6NNW4; B4DLD9; Q6ZND1; Q75MJ3; Q8IZE0; Q8N0W2; Q8N6B7; Q8N6B8; Q8NFQ1; Q8NFQ2; Q8NFQ3; Q8NFQ4; Q8TD74;
Entrez ID 93986
Genbank protein ID BAD18444.1; AAN03403.1; EAW83484.1; AAN60016.1; AAN03395.1; AAN03405.1; AAL10762.1; AAB91439.1; AAM60767.1; AAM60762.1; AAI43867.1; AAN03406.1; EAW83486.1; AAM60763.1; AAN03402.1; AAN03396.1; AAN03399.1; AAN03390.1; EAL24367.1; AAN03401.1; AAS07399.1; AAN03404.1; AAM60765.1; AAN03391.1; AAI26105.1; AAM13672.1; AAN03398.1; AAS07502.1; AAN03394.1; AAM60764.1; AAN03392.1; AAN03408.1; EAL24369.1; AAM60766.1; AAN03393.1; BAG59501.1; AAN03397.1; AAN03400.1; AAN03389.1; AAN03407.1;
Genbank nucleotide ID XM_017012801.1; NM_148900.3; NM_014491.3; NM_001172767.2; NM_148899.3; NM_148898.3; NM_001172766.2;
Ensembl protein ID ENSP00000377132; ENSP00000265436; ENSP00000405470; ENSP00000385069; ENSP00000386200; ENSP00000416825; ENSP00000489457; ENSP00000367482; ENSP00000353367; ENSP00000377129;
Ensembl nucleotide ID ENSG00000128573
Gene name Forkhead box protein P2
Gene symbol FOXP2
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Manually collected
Reference 26868259
Functional description Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Plays a role in synapse formation by regulating SRPX2 levels. Involved in neural mechanisms mediating the development of speech and language.
Sequence
MMQESATETI SNSSMNQNGM STLSSQLDAG SRDGRSSGDT SSEVSTVELL HLQQQQALQA 60
ARQLLLQQQT SGLKSPKSSD KQRPLQVPVS VAMMTPQVIT PQQMQQILQQ QVLSPQQLQA 120
LLQQQQAVML QQQQLQEFYK KQQEQLHLQL LQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ 180
QQQQQQQQQQ QHPGKQAKEQ QQQQQQQQQL AAQQLVFQQQ LLQMQQLQQQ QHLLSLQRQG 240
LISIPPGQAA LPVQSLPQAG LSPAEIQQLW KEVTGVHSME DNGIKHGGLD LTTNNSSSTT 300
SSNTSKASPP ITHHSIVNGQ SSVLSARRDS SSHEETGASH TLYGHGVCKW PGCESICEDF 360
GQFLKHLNNE HALDDRSTAQ CRVQMQVVQQ LEIQLSKERE RLQAMMTHLH MRPSEPKPSP 420
KPLNLVSSVT MSKNMLETSP QSLPQTPTTP TAPVTPITQG PSVITPASVP NVGAIRRRHS 480
DKYNIPMSSE IAPNYEFYKN ADVRPPFTYA TLIRQAIMES SDRQLTLNEI YSWFTRTFAY 540
FRRNAATWKN AVRHNLSLHK CFVRVENVKG AVWTVDEVEY QKRRSQKITG SPTLVKNIPT 600
SLGYGAALNA SLQAALAESS LPLLSNPGLI NNASSGLLQA VHEDLNGSLD HIDSNGNSSP 660
GCSPQPHIHS IHVKEEPVIA EDEDCPMSLV TTANHSPELE DDREIEEEPL SEDLE 715

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database


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Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologFOXP2A0A452FUL3Capra hircusPredictionMore>>
1:1 orthologFOXP293986O15409Homo sapiensPublicationMore>>
1:1 orthologFoxp2114142P58463E14.5Mus musculusPredictionMore>>
1:1 orthologFOXP2449627Q8MJA0Pan troglodytesPredictionMore>>
1:1 orthologFOXP2A0A5G2QN29Sus scrofaPredictionMore>>
1:1 orthologFoxp2500037P0CF24Rattus norvegicusPredictionMore>>
1:1 orthologfoxp2H0WFE7Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA bindingIEA
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specificISA
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specificISM
GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specificIEA
GO:0003677 DNA bindingIDA
GO:0003700 DNA-binding transcription factor activityIDA
GO:0005515 protein bindingIPI
GO:0042802 identical protein bindingIPI
GO:0042803 protein homodimerization activityIDA
GO:0043565 sequence-specific DNA bindingIDA
GO:0046872 metal ion bindingIEA
GO:0050681 androgen receptor bindingIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0000122 negative regulation of transcription by RNA polymerase IIIEA
GO:0002053 positive regulation of mesenchymal cell proliferationIEA
GO:0007519 skeletal muscle tissue developmentIEA
GO:0009791 post-embryonic developmentIEA
GO:0021549 cerebellum developmentIEA
GO:0021757 caudate nucleus developmentIMP
GO:0021758 putamen developmentIMP
GO:0021987 cerebral cortex developmentIEP
GO:0033574 response to testosteroneIEA
GO:0042297 vocal learningIEA
GO:0043010 camera-type eye developmentIEA
GO:0045892 negative regulation of transcription, DNA-templatedIDA
GO:0048286 lung alveolus developmentIEA
GO:0048745 smooth muscle tissue developmentIEA
GO:0060013 righting reflexIEA
GO:0060501 positive regulation of epithelial cell proliferation involved in lung morphogenesisIEA
GO:0098582 innate vocalization behaviorIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0000790 nuclear chromatinISA

Reactome Pathway

Reactome ID Reactome Term Evidence

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0025 Alternative splicing
KW-0160 Chromosomal rearrangement
KW-0225 Disease mutation
KW-0238 DNA-binding
KW-0479 Metal-binding
KW-0539 Nucleus
KW-1185 Reference proteome
KW-0678 Repressor
KW-0804 Transcription
KW-0805 Transcription regulation
KW-0862 Zinc
KW-0863 Zinc-finger

Interpro

InterPro ID InterPro Term
IPR001766 Fork_head_dom
IPR032354 FOXP-CC
IPR030456 TF_fork_head_CS_2
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf

PROSITE

PROSITE ID PROSITE Term
PS00658 FORK_HEAD_2
PS50039 FORK_HEAD_3
PS00028 ZINC_FINGER_C2H2_1

Pfam

Pfam ID Pfam Term
PF00250 Forkhead
PF16159 FOXP-CC

Protein-protein interaction

Protein-miRNA interaction