Gene: WDPCP

Basic information

Tag Content
Uniprot ID O95876; Q53RW4; Q7Z2Z3;
Entrez ID 51057
Genbank protein ID AAY24034.1; AAH93754.1; AAH93752.1; AAD20026.1; CAD98100.1;
Genbank nucleotide ID NM_015910.5; NM_001042692.2;
Ensembl protein ID ENSP00000381552; ENSP00000387222; ENSP00000272321;
Ensembl nucleotide ID ENSG00000143951
Gene name WD repeat-containing and planar cell polarity effector protein fritz homolog
Gene symbol WDPCP
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Probable effector of the planar cell polarity signaling pathway which regulates the septin cytoskeleton in both ciliogenesis and collective cell movements. Together with FUZ and WDPCP proposed to function as core component of the CPLANE (ciliogenesis and planar polarity effectors) complex involved in the recruitment of peripheral IFT-A proteins to basal bodies (By similarity).
Sequence
MRREFCWDAY SKAAGSRASS PLPRQDRDSF CHQMSFCLTE LHLWSLKNTL HIADRDIGIY 60
QYYDKKDPPA TEHGNLEKKQ KLAESRDYPW TLKNRRPEKL RDSLKELEEL MQNSRCVLSK 120
WKNKYVCQLL FGSGVLVSLS LSGPQLEKVV IDRSLVGKLI SDTISDALLT DSFIILSFLA 180
QNKLCFIQFT KKMESSDVNK RLEKLSALDY KIFYYEIPGP INKTTERHLA INCVHDRVVC 240
WWPLVNDDAW PWAPISSEKD RANLLLLGYA QGRLEVLSSV RTEWDPLDVR FGTKQPYQVF 300
TVEHSVSVDK EPMADSCIYE CIRNKIQCVS VTRIPLKSKA ISCCRNVTED KLILGCEDSS 360
LILYETHRRV TLLAQTELLP SLISCHPSGA ILLVGSNQGE LQIFDMALSP INIQLLAEDR 420
LPRETLQFSK LFDASSSLVQ MQWIAPQVVS QKGEGSDIYD LLFLRFERGP LGVLLFKLGV 480
FTRGQLGLID IIFQYIHCDE IYEAINILSS MNWDTLGHQC FISMSAIVNH LLRQKLTPER 540
EAQLETSLGT FYAPTRPLLD STILEYRDQI SKYARRFFHH LLRYQRFEKA FLLAVDVGAR 600
DLFMDIHYLA LDKGELALAE VARKRASDID AESITSGVEL LGPLDRGDML NEAFIGLSLA 660
PQGEDSFPDN LPPSCPTHRH ILQQRILNGS SNRQIIDRRN ELEKDICSGF LMTNTCNAED 720
GELREDGREQ EIRDGGSLKM IHFGLV 746

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologWDPCPF1Q1T8Canis lupus familiarisPredictionMore>>
1:1 orthologWDPCPA0A452F7N6Capra hircusPredictionMore>>
1:1 orthologWDPCP51057O95876Homo sapiensPredictionMore>>
1:1 orthologWdpcp216560Q8C456CPOMus musculusPublicationMore>>
1:1 orthologWDPCP459270H2R2S2Pan troglodytesPredictionMore>>
1:1 orthologA0A287AI40Sus scrofaPredictionMore>>
1:1 orthologWdpcpA0A0G2JXB0Rattus norvegicusPredictionMore>>
1:1 orthologwdpcp100333125E7F9Q9Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence

GO:Biological Process

GO ID GO Term Evidence
GO:0001822 kidney developmentIEA
GO:0002093 auditory receptor cell morphogenesisIEA
GO:0007224 smoothened signaling pathwayIEA
GO:0010762 regulation of fibroblast migrationIEA
GO:0016476 regulation of embryonic cell shapeISS
GO:0032185 septin cytoskeleton organizationISS
GO:0032880 regulation of protein localizationISS
GO:0042733 embryonic digit morphogenesisIEA
GO:0043010 camera-type eye developmentIEA
GO:0045184 establishment of protein localizationIBA
GO:0051893 regulation of focal adhesion assemblyIEA
GO:0055123 digestive system developmentIEA
GO:0060021 roof of mouth developmentIEA
GO:0060271 cilium assemblyISS
GO:0060541 respiratory system developmentIEA
GO:0072358 cardiovascular system developmentIEA
GO:0090521 glomerular visceral epithelial cell migrationIEA
GO:1900027 regulation of ruffle assemblyIEA
GO:2000114 regulation of establishment of cell polarityIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005930 axonemeISS
GO:0097541 axonemal basal plateIEA
GO:0005886 plasma membraneISS
GO:0005938 cell cortexISS
GO:0016324 apical plasma membraneISS

Reactome Pathway

Reactome ID Reactome Term Evidence

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0083 Bardet-Biedl syndrome
KW-1003 Cell membrane
KW-0966 Cell projection
KW-1186 Ciliopathy
KW-0969 Cilium
KW-0970 Cilium biogenesis/degradation
KW-0963 Cytoplasm
KW-0206 Cytoskeleton
KW-0225 Disease mutation
KW-0472 Membrane
KW-0991 Mental retardation
KW-0550 Obesity
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0677 Repeat
KW-0853 WD repeat

Interpro

InterPro ID InterPro Term
IPR024511 Frtz
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR036322 WD40_repeat_dom_sf

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF11768 Frtz

Protein-protein interaction

Protein-miRNA interaction