Gene: PAH

Basic information

Tag Content
Uniprot ID P00439; Q16717; Q8TC14;
Entrez ID 5053
Genbank protein ID AAD13926.1; AAC51772.1; AAH26251.1; AAA60082.1;
Genbank nucleotide ID NM_000277.1
Ensembl protein ID ENSP00000448059
Ensembl nucleotide ID ENSG00000171759
Gene name Phenylalanine-4-hydroxylase
Gene symbol PAH
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type CL/P
Developmental stage
Data sources Manually collected
Reference 24606907
Functional description Catalyzes the hydroxylation of L-phenylalanine to L-tyrosine.
Sequence
MSTAVLENPG LGRKLSDFGQ ETSYIEDNCN QNGAISLIFS LKEEVGALAK VLRLFEENDV 60
NLTHIESRPS RLKKDEYEFF THLDKRSLPA LTNIIKILRH DIGATVHELS RDKKKDTVPW 120
FPRTIQELDR FANQILSYGA ELDADHPGFK DPVYRARRKQ FADIAYNYRH GQPIPRVEYM 180
EEEKKTWGTV FKTLKSLYKT HACYEYNHIF PLLEKYCGFH EDNIPQLEDV SQFLQTCTGF 240
RLRPVAGLLS SRDFLGGLAF RVFHCTQYIR HGSKPMYTPE PDICHELLGH VPLFSDRSFA 300
QFSQEIGLAS LGAPDEYIEK LATIYWFTVE FGLCKQGDSI KAYGAGLLSS FGELQYCLSE 360
KPKLLPLELE KTAIQNYTVT EFQPLYYVAE SFNDAKEKVR NFAATIPRPF SVRYDPYTQR 420
IEVLDNTQQL KILADSINSE IGILCSALQK IK 452

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPAH510583Q2KIH7Bos taurusPredictionMore>>
1:1 orthologPAHF6XY00Canis lupus familiarisPredictionMore>>
1:1 orthologPAHA0A452F3X2Capra hircusPredictionMore>>
1:1 orthologPAH5053P00439CL/PHomo sapiensPublicationMore>>
1:1 orthologPah18478P16331Mus musculusPredictionMore>>
1:1 orthologPAHA0A2I3SWI0Pan troglodytesPredictionMore>>
1:1 orthologPAHF1SRJ8Sus scrofaPredictionMore>>
1:1 orthologPAH100354678G1T8B6Oryctolagus cuniculusPredictionMore>>
1:1 orthologPah24616Q6AYW2Rattus norvegicusPredictionMore>>
1:1 orthologpahQ7SYH6Danio rerioPredictionMore>>

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
PAHrs7485331C>AGenotyping24606907
PAHrs12425434T>CGenotyping24606907

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0004505 phenylalanine 4-monooxygenase activityIDA
GO:0004505 phenylalanine 4-monooxygenase activityIBA
GO:0005506 iron ion bindingIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0006559 L-phenylalanine catabolic processIEA
GO:0006559 L-phenylalanine catabolic processTAS
GO:0006571 tyrosine biosynthetic processIBA
GO:0008652 cellular amino acid biosynthetic processTAS
GO:0042136 neurotransmitter biosynthetic processNAS
GO:0042423 catecholamine biosynthetic processNAS
GO:0055114 oxidation-reduction processIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005829 cytosolTAS

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-1430728 MetabolismTAS
R-HSA-1643685 DiseaseTAS
R-HSA-2160456 PhenylketonuriaTAS
R-HSA-5668914 Diseases of metabolismTAS
R-HSA-71291 Metabolism of amino acids and derivativesTAS
R-HSA-8963691 Phenylalanine and tyrosine metabolismTAS
R-HSA-8964208 Phenylalanine metabolismTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0021 Allosteric enzyme
KW-0903 Direct protein sequencing
KW-0225 Disease mutation
KW-0408 Iron
KW-0479 Metal-binding
KW-0503 Monooxygenase
KW-0560 Oxidoreductase
KW-0585 Phenylalanine catabolism
KW-0586 Phenylketonuria
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR002912 ACT_dom
IPR001273 ArAA_hydroxylase
IPR018301 ArAA_hydroxylase_Fe/CU_BS
IPR036951 ArAA_hydroxylase_sf
IPR036329 Aro-AA_hydroxylase_C_sf
IPR019774 Aromatic-AA_hydroxylase_C
IPR041912 Euk_PheOH_cat
IPR005961 Phe-4-hydroxylase_tetra
IPR019773 Tyrosine_3-monooxygenase-like

PROSITE

PROSITE ID PROSITE Term
PS51671 ACT
PS00367 BH4_AAA_HYDROXYL_1
PS51410 BH4_AAA_HYDROXYL_2

Pfam

Pfam ID Pfam Term
PF01842 ACT
PF00351 Biopterin_H

Protein-protein interaction

Protein-miRNA interaction