Gene: PRSS1

Basic information

Tag Content
Uniprot ID P07477; A1A509; A6NJ71; B2R5I5; Q5NV57; Q7M4N3; Q7M4N4; Q92955; Q9HAN4; Q9HAN5; Q9HAN6; Q9HAN7;
Entrez ID 5644
Genbank protein ID EAL23773.1; AAA61231.1; AAG30943.1; AAG30948.1; AAI28227.1; AAC50728.1; AAG30947.1; AAC80207.1; EAW51925.1; AAG30949.1; BAG35132.1;
Genbank nucleotide ID NM_002769.4
Ensembl protein ID ENSP00000308720; ENSP00000479217;
Ensembl nucleotide ID ENSG00000204983; ENSG00000274247;
Gene name Trypsin-1
Gene symbol PRSS1
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Manually collected
Reference 26449438
Functional description Has activity against the synthetic substrates Boc-Phe-Ser-Arg-Mec, Boc-Leu-Thr-Arg-Mec, Boc-Gln-Ala-Arg-Mec and Boc-Val-Pro-Arg-Mec. The single-chain form is more active than the two-chain form against all of these substrates.
Sequence
MNPLLILTFV AAALAAPFDD DDKIVGGYNC EENSVPYQVS LNSGYHFCGG SLINEQWVVS 60
AGHCYKSRIQ VRLGEHNIEV LEGNEQFINA AKIIRHPQYD RKTLNNDIML IKLSSRAVIN 120
ARVSTISLPT APPATGTKCL ISGWGNTASS GADYPDELQC LDAPVLSQAK CEASYPGKIT 180
SNMFCVGFLE GGKDSCQGDS GGPVVCNGQL QGVVSWGDGC AQKNKPGVYT KVYNYVKWIK 240
NTIAANS 247

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
PRSS1c.542C>T; p.S181NWES and Sanger sequencing26449438

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0004252 serine-type endopeptidase activityIBA
GO:0004252 serine-type endopeptidase activityTAS
GO:0046872 metal ion bindingIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0006508 proteolysisIBA
GO:0007586 digestionIEA
GO:0009235 cobalamin metabolic processTAS
GO:0022617 extracellular matrix disassemblyTAS

GO:Cellular Component

GO ID GO Term Evidence
GO:0005576 extracellular regionNAS
GO:0005576 extracellular regionTAS
GO:0005615 extracellular spaceIBA
GO:0062023 collagen-containing extracellular matrixHDA
GO:0072562 blood microparticleHDA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-1430728 MetabolismTAS
R-HSA-1474228 Degradation of the extracellular matrixTAS
R-HSA-1474244 Extracellular matrix organizationTAS
R-HSA-1592389 Activation of Matrix MetalloproteinasesTAS
R-HSA-196741 Cobalamin (Cbl, vitamin B12) transport and metabolismTAS
R-HSA-196849 Metabolism of water-soluble vitamins and cofactorsTAS
R-HSA-196854 Metabolism of vitamins and cofactorsTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0106 Calcium
KW-0222 Digestion
KW-0903 Direct protein sequencing
KW-0225 Disease mutation
KW-1015 Disulfide bond
KW-0378 Hydrolase
KW-0479 Metal-binding
KW-0621 Polymorphism
KW-0645 Protease
KW-1185 Reference proteome
KW-0964 Secreted
KW-0720 Serine protease
KW-0732 Signal
KW-0765 Sulfation
KW-0865 Zymogen

Interpro

InterPro ID InterPro Term
IPR009003 Peptidase_S1_PA
IPR001314 Peptidase_S1A
IPR001254 Trypsin_dom
IPR018114 TRYPSIN_HIS
IPR033116 TRYPSIN_SER

PROSITE

PROSITE ID PROSITE Term
PS50240 TRYPSIN_DOM
PS00134 TRYPSIN_HIS
PS00135 TRYPSIN_SER

Pfam

Pfam ID Pfam Term
PF00089 Trypsin

Protein-protein interaction