Gene: Schip1

Basic information

Tag Content
Uniprot ID P0DPB4; A8IJC6; A8IJD0; A8IJD3; F6YL02; F8WI70; Q3TI53; Q52KH1; Q6P9Y8; Q9CX07; Q9JLR0;
Entrez ID 30953
Genbank protein ID AAH60529.1; BAB32387.1; ABW06761.1; BAE27541.1; BAE39993.1; AAF34244.1; AAH94348.1; ABW06760.1;
Genbank nucleotide ID NM_001113421.1; NM_001282044.1; NM_001282045.1; NM_001113420.1; NM_013928.5;
Ensembl protein ID ENSMUSP00000138245; ENSMUSP00000138207; ENSMUSP00000129152; ENSMUSP00000029346; ENSMUSP00000126443;
Ensembl nucleotide ID ENSMUSG00000027777
Gene name Schwannomin-interacting protein 1
Gene symbol Schip1
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage
Data sources Manually collected
Reference 17143286
Functional description
Sequence
MERSEQRVRA AWDCDPGKQA DRDYREDGMD LGSDAGSSSS SRASSQSNST KVTPCSECKS 60
SSSPGGSLDL VSALEDYEEP FPVYQKKVID EWAPEEDGEE EEEEDDRGYR DDGCPAREPG 120
DVSARIGSSG SGSRSAATTM PSPMPNGNLH PHDPQDLRHN GNVVVAGRPN ASRVPRRPIQ 180
KTQPPGSRRG GRNRASGGLC LQPPDGGTRV PEEPPAPPMD WEALEKHLAG LQFREQEVRN 240
QGQARTNSTS AQKNERESIR QKLALGSFFD DGPGIYTSCS KSGKPSLSAR LQSGMNLQIC 300
FVNDSGSDKD SDADDSKTET SLDTPLSPMS KQSSSYSDRD TTEEESESLD DMDFLTRQKK 360
LQAEAKMALA MAKPMAKMQV EVEKQNRKKS PVADLLPHMP HISECLMKRS LKPTDLRDMT 420
IGQLQVIVND LHSQIESLNE ELVQLLLIRD ELHTEQDAML VDIEDLTRHA ESQQKHMAEK 480
MPAK 484

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0005515 protein bindingIPI
GO:0042802 identical protein bindingISO
GO:0042803 protein homodimerization activityISO

GO:Biological Process

GO ID GO Term Evidence
GO:0001553 luteinizationIGI
GO:0001822 kidney developmentIMP
GO:0006807 nitrogen compound metabolic processIMP
GO:0008210 estrogen metabolic processIGI
GO:0008585 female gonad developmentIGI
GO:0009791 post-embryonic developmentIMP
GO:0010761 fibroblast migrationIMP
GO:0048008 platelet-derived growth factor receptor signaling pathwayIMP
GO:0048705 skeletal system morphogenesisIMP
GO:0048745 smooth muscle tissue developmentIMP
GO:0060021 roof of mouth developmentIMP
GO:0060325 face morphogenesisIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0005737 cytoplasmISO

Reactome Pathway

Reactome ID Reactome Term Evidence

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0175 Coiled coil
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR039045 SCHIP_1
IPR015649 SCHIP_1_C

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF10148 SCHIP-1

Protein-protein interaction

Protein-miRNA interaction