Gene: IGF2R

Basic information

Tag Content
Uniprot ID P11717; Q7Z7G9; Q96PT5;
Entrez ID 3482
Genbank protein ID CAA68395.1; AAP37954.1; AAA59866.1; AAL04402.1; AAF16870.1;
Genbank nucleotide ID NM_000876.3
Ensembl protein ID ENSP00000349437
Ensembl nucleotide ID ENSG00000197081
Gene name Cation-independent mannose-6-phosphate receptor
Gene symbol IGF2R
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Transport of phosphorylated lysosomal enzymes from the Golgi complex and the cell surface to lysosomes. Lysosomal enzymes bearing phosphomannosyl residues bind specifically to mannose-6-phosphate receptors in the Golgi apparatus and the resulting receptor-ligand complex is transported to an acidic prelyosomal compartment where the low pH mediates the dissociation of the complex. This receptor also binds IGF2. Acts as a positive regulator of T-cell coactivation, by binding DPP4.
Sequence
MGAAAGRSPH LGPAPARRPQ RSLLLLQLLL LVAAPGSTQA QAAPFPELCS YTWEAVDTKN 60
NVLYKINICG SVDIVQCGPS SAVCMHDLKT RTYHSVGDSV LRSATRSLLE FNTTVSCDQQ 120
GTNHRVQSSI AFLCGKTLGT PEFVTATECV HYFEWRTTAA CKKDIFKANK EVPCYVFDEE 180
LRKHDLNPLI KLSGAYLVDD SDPDTSLFIN VCRDIDTLRD PGSQLRACPP GTAACLVRGH 240
QAFDVGQPRD GLKLVRKDRL VLSYVREEAG KLDFCDGHSP AVTITFVCPS ERREGTIPKL 300
TAKSNCRYEI EWITEYACHR DYLESKTCSL SGEQQDVSID LTPLAQSGGS SYISDGKEYL 360
FYLNVCGETE IQFCNKKQAA VCQVKKSDTS QVKAAGRYHN QTLRYSDGDL TLIYFGGDEC 420
SSGFQRMSVI NFECNKTAGN DGKGTPVFTG EVDCTYFFTW DTEYACVKEK EDLLCGATDG 480
KKRYDLSALV RHAEPEQNWE AVDGSQTETE KKHFFINICH RVLQEGKARG CPEDAAVCAV 540
DKNGSKNLGK FISSPMKEKG NIQLSYSDGD DCGHGKKIKT NITLVCKPGD LESAPVLRTS 600
GEGGCFYEFE WHTAAACVLS KTEGENCTVF DSQAGFSFDL SPLTKKNGAY KVETKKYDFY 660
INVCGPVSVS PCQPDSGACQ VAKSDEKTWN LGLSNAKLSY YDGMIQLNYR GGTPYNNERH 720
TPRATLITFL CDRDAGVGFP EYQEEDNSTY NFRWYTSYAC PEEPLECVVT DPSTLEQYDL 780
SSLAKSEGGL GGNWYAMDNS GEHVTWRKYY INVCRPLNPV PGCNRYASAC QMKYEKDQGS 840
FTEVVSISNL GMAKTGPVVE DSGSLLLEYV NGSACTTSDG RQTTYTTRIH LVCSRGRLNS 900
HPIFSLNWEC VVSFLWNTEA ACPIQTTTDT DQACSIRDPN SGFVFNLNPL NSSQGYNVSG 960
IGKIFMFNVC GTMPVCGTIL GKPASGCEAE TQTEELKNWK PARPVGIEKS LQLSTEGFIT 1020
LTYKGPLSAK GTADAFIVRF VCNDDVYSGP LKFLHQDIDS GQGIRNTYFE FETALACVPS 1080
PVDCQVTDLA GNEYDLTGLS TVRKPWTAVD TSVDGRKRTF YLSVCNPLPY IPGCQGSAVG 1140
SCLVSEGNSW NLGVVQMSPQ AAANGSLSIM YVNGDKCGNQ RFSTRITFEC AQISGSPAFQ 1200
LQDGCEYVFI WRTVEACPVV RVEGDNCEVK DPRHGNLYDL KPLGLNDTIV SAGEYTYYFR 1260
VCGKLSSDVC PTSDKSKVVS SCQEKREPQG FHKVAGLLTQ KLTYENGLLK MNFTGGDTCH 1320
KVYQRSTAIF FYCDRGTQRP VFLKETSDCS YLFEWRTQYA CPPFDLTECS FKDGAGNSFD 1380
LSSLSRYSDN WEAITGTGDP EHYLINVCKS LAPQAGTEPC PPEAAACLLG GSKPVNLGRV 1440
RDGPQWRDGI IVLKYVDGDL CPDGIRKKST TIRFTCSESQ VNSRPMFISA VEDCEYTFAW 1500
PTATACPMKS NEHDDCQVTN PSTGHLFDLS SLSGRAGFTA AYSEKGLVYM SICGENENCP 1560
PGVGACFGQT RISVGKANKR LRYVDQVLQL VYKDGSPCPS KSGLSYKSVI SFVCRPEARP 1620
TNRPMLISLD KQTCTLFFSW HTPLACEQAT ECSVRNGSSI VDLSPLIHRT GGYEAYDESE 1680
DDASDTNPDF YINICQPLNP MHGVPCPAGA AVCKVPIDGP PIDIGRVAGP PILNPIANEI 1740
YLNFESSTPC LADKHFNYTS LIAFHCKRGV SMGTPKLLRT SECDFVFEWE TPVVCPDEVR 1800
MDGCTLTDEQ LLYSFNLSSL STSTFKVTRD SRTYSVGVCT FAVGPEQGGC KDGGVCLLSG 1860
TKGASFGRLQ SMKLDYRHQD EAVVLSYVNG DRCPPETDDG VPCVFPFIFN GKSYEECIIE 1920
SRAKLWCSTT ADYDRDHEWG FCRHSNSYRT SSIIFKCDED EDIGRPQVFS EVRGCDVTFE 1980
WKTKVVCPPK KLECKFVQKH KTYDLRLLSS LTGSWSLVHN GVSYYINLCQ KIYKGPLGCS 2040
ERASICRRTT TGDVQVLGLV HTQKLGVIGD KVVVTYSKGY PCGGNKTASS VIELTCTKTV 2100
GRPAFKRFDI DSCTYYFSWD SRAACAVKPQ EVQMVNGTIT NPINGKSFSL GDIYFKLFRA 2160
SGDMRTNGDN YLYEIQLSSI TSSRNPACSG ANICQVKPND QHFSRKVGTS DKTKYYLQDG 2220
DLDVVFASSS KCGKDKTKSV SSTIFFHCDP LVEDGIPEFS HETADCQYLF SWYTSAVCPL 2280
GVGFDSENPG DDGQMHKGLS ERSQAVGAVL SLLLVALTCC LLALLLYKKE RRETVISKLT 2340
TCCRRSSNVS YKYSKVNKEE ETDENETEWL MEEIQLPPPR QGKEGQENGH ITTKSVKALS 2400
SLHGDDQDSE DEVLTIPEVK VHSGRGAGAE SSHPVRNAQS NALQEREDDR VGLVRGEKAR 2460
KGKSSSAQQK TVSSTKLVSF HDDSDEDLLH I 2491

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologIGF2R484067B1H0W0Canis lupus familiarisPredictionMore>>
1:1 orthologIGF2R100860744A0A452E644Capra hircusPredictionMore>>
1:1 orthologIGF2R3482P11717Homo sapiensPredictionMore>>
1:1 orthologIgf2r16004Q07113CPOMus musculusPublicationMore>>
1:1 orthologIGF2R463112H2QU01Pan troglodytesPredictionMore>>
1:1 orthologIGF2RF1SB67Sus scrofaPredictionMore>>
1:1 orthologIgf2r25151G3V824Rattus norvegicusPredictionMore>>
1:1 orthologigf2r557061Q2TTK0Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0001965 G-protein alpha-subunit bindingIEA
GO:0001972 retinoic acid bindingIEA
GO:0005010 insulin-like growth factor-activated receptor activityTAS
GO:0005515 protein bindingIDA
GO:0005515 protein bindingIPI
GO:0005520 insulin-like growth factor bindingIBA
GO:0005537 mannose bindingIEA
GO:0019899 enzyme bindingIEA
GO:0031995 insulin-like growth factor II bindingIEA
GO:0038023 signaling receptor activityTAS
GO:0042802 identical protein bindingIPI
GO:0051219 phosphoprotein bindingIDA

GO:Biological Process

GO ID GO Term Evidence
GO:0001889 liver developmentIEA
GO:0006898 receptor-mediated endocytosisTAS
GO:0007041 lysosomal transportIEA
GO:0007165 signal transductionTAS
GO:0007186 G protein-coupled receptor signaling pathwayIEA
GO:0007283 spermatogenesisIEA
GO:0009791 post-embryonic developmentIEA
GO:0031100 animal organ regenerationIEA
GO:0032526 response to retinoic acidIEA
GO:0043065 positive regulation of apoptotic processIEA
GO:0043312 neutrophil degranulationTAS
GO:0044794 positive regulation by host of viral processIMP
GO:0048009 insulin-like growth factor receptor signaling pathwayIEA
GO:0061024 membrane organizationTAS

GO:Cellular Component

GO ID GO Term Evidence
GO:0005641 nuclear envelope lumenIEA
GO:0005765 lysosomal membraneIEA
GO:0005768 endosomeIDA
GO:0005768 endosomeIBA
GO:0005769 early endosomeIMP
GO:0005770 late endosomeIBA
GO:0005770 late endosomeIDA
GO:0005794 Golgi apparatusIDA
GO:0005802 trans-Golgi networkIMP
GO:0005802 trans-Golgi networkIBA
GO:0005886 plasma membraneIBA
GO:0005886 plasma membraneTAS
GO:0005887 integral component of plasma membraneTAS
GO:0005925 focal adhesionHDA
GO:0009986 cell surfaceIDA
GO:0016020 membraneHDA
GO:0030118 clathrin coatIEA
GO:0030133 transport vesicleTAS
GO:0030139 endocytic vesicleIDA
GO:0030140 trans-Golgi network transport vesicleIDA
GO:0030665 clathrin-coated vesicle membraneTAS
GO:0030667 secretory granule membraneTAS
GO:0032588 trans-Golgi network membraneTAS
GO:0048471 perinuclear region of cytoplasmIEA
GO:0070062 extracellular exosomeHDA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-168249 Innate Immune SystemTAS
R-HSA-168256 Immune SystemTAS
R-HSA-199991 Membrane TraffickingTAS
R-HSA-199992 trans-Golgi Network Vesicle BuddingTAS
R-HSA-432722 Golgi Associated Vesicle BiogenesisTAS
R-HSA-5653656 Vesicle-mediated transportTAS
R-HSA-6798695 Neutrophil degranulationTAS
R-HSA-6811440 Retrograde transport at the Trans-Golgi-NetworkTAS
R-HSA-6811442 Intra-Golgi and retrograde Golgi-to-ER trafficTAS
R-HSA-8856825 Cargo recognition for clathrin-mediated endocytosisTAS
R-HSA-8856828 Clathrin-mediated endocytosisTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0007 Acetylation
KW-0903 Direct protein sequencing
KW-1015 Disulfide bond
KW-0325 Glycoprotein
KW-0458 Lysosome
KW-0472 Membrane
KW-0488 Methylation
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-0675 Receptor
KW-1185 Reference proteome
KW-0677 Repeat
KW-0732 Signal
KW-0812 Transmembrane
KW-1133 Transmembrane helix
KW-0813 Transport

Interpro

InterPro ID InterPro Term
IPR000479 CIMR_rpt
IPR000562 FN_type2_dom
IPR036943 FN_type2_sf
IPR013806 Kringle-like
IPR009011 Man6P_isomerase_rcpt-bd_dom_sf

PROSITE

PROSITE ID PROSITE Term
PS00023 FN2_1
PS51092 FN2_2
PS51914 MRH

Pfam

Pfam ID Pfam Term
PF00878 CIMR
PF00040 fn2

Protein-protein interaction

Protein-miRNA interaction