Tag | Content |
---|---|
Uniprot ID | P18564; B2R9W5; C9JA97; Q0VA95; Q16500; Q53RG5; Q53RR6; |
Entrez ID | 3694 |
Genbank protein ID | BAG36662.1; AAI21179.1; AAA36122.2; AAX93093.1; AAY24053.1; EAX11390.1; AAB23690.1; |
Genbank nucleotide ID | NM_001282388.1; NM_001282355.1; NM_001282353.1; NM_000888.4; |
Ensembl protein ID | ENSP00000386828; ENSP00000283249; ENSP00000386367; |
Ensembl nucleotide ID | ENSG00000115221 |
Gene name | Integrin beta-6 |
Gene symbol | ITGB6 |
Organism | Homo sapiens |
NCBI taxa ID | 9606 |
Cleft type | |
Developmental stage | |
Data sources | Homology search |
Reference | |
Functional description | Integrin alpha-V:beta-6 (ITGAV:ITGB6) is a receptor for fibronectin and cytotactin (PubMed:17545607, PubMed:17158881). It recognizes the sequence R-G-D in its ligands (PubMed:17545607, PubMed:17158881). Internalisation of integrin alpha-V/beta-6 via clathrin-mediated endocytosis promotes carcinoma cell invasion (PubMed:17545607, PubMed:17158881). ITGAV:ITGB6 acts as a receptor for fibrillin-1 (FBN1) and mediates R-G-D-dependent cell adhesion to FBN1 (PubMed:17158881). Integrin alpha-V:beta-6 (ITGAV:ITGB6) mediates R-G-D-dependent release of transforming growth factor beta-1 (TGF-beta-1) from regulatory Latency-associated peptide (LAP), thereby playing a key role in TGF-beta-1 activation (PubMed:15184403, PubMed:22278742, PubMed:28117447). |
Sequence | MGIELLCLFF LFLGRNDHVQ GGCALGGAET CEDCLLIGPQ CAWCAQENFT HPSGVGERCD 60 TPANLLAKGC QLNFIENPVS QVEILKNKPL SVGRQKNSSD IVQIAPQSLI LKLRPGGAQT 120 LQVHVRQTED YPVDLYYLMD LSASMDDDLN TIKELGSRLS KEMSKLTSNF RLGFGSFVEK 180 PVSPFVKTTP EEIANPCSSI PYFCLPTFGF KHILPLTNDA ERFNEIVKNQ KISANIDTPE 240 GGFDAIMQAA VCKEKIGWRN DSLHLLVFVS DADSHFGMDS KLAGIVIPND GLCHLDSKNE 300 YSMSTVLEYP TIGQLIDKLV QNNVLLIFAV TQEQVHLYEN YAKLIPGATV GLLQKDSGNI 360 LQLIISAYEE LRSEVELEVL GDTEGLNLSF TAICNNGTLF QHQKKCSHMK VGDTASFSVT 420 VNIPHCERRS RHIIIKPVGL GDALELLVSP ECNCDCQKEV EVNSSKCHHG NGSFQCGVCA 480 CHPGHMGPRC ECGEDMLSTD SCKEAPDHPS CSGRGDCYCG QCICHLSPYG NIYGPYCQCD 540 NFSCVRHKGL LCGGNGDCDC GECVCRSGWT GEYCNCTTST DSCVSEDGVL CSGRGDCVCG 600 KCVCTNPGAS GPTCERCPTC GDPCNSKRSC IECHLSAAGQ AREECVDKCK LAGATISEEE 660 DFSKDGSVSC SLQGENECLI TFLITTDNEG KTIIHSINEK DCPKPPNIPM IMLGVSLAIL 720 LIGVVLLCIW KLLVSFHDRK EVAKFEAERS KAKWQTGTNP LYRGSTSTFK NVTYKHREKQ 780 KVDLSTDC 788 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
---|---|---|---|---|---|---|---|---|
1:1 ortholog | ITGB6 | 282644 | Q8SQB8 | Bos taurus | Prediction | More>> | ||
1:1 ortholog | ITGB6 | 102188539 | A0A452EJ04 | Capra hircus | Prediction | More>> | ||
1:1 ortholog | ITGB6 | 3694 | P18564 | Homo sapiens | Prediction | More>> | ||
1:1 ortholog | Itgb6 | 16420 | Q9Z0T9 | CPO | Mus musculus | Publication | More>> | |
1:1 ortholog | ITGB6 | A0A2I3SC11 | Pan troglodytes | Prediction | More>> | |||
1:1 ortholog | A0A480ES98 | Sus scrofa | Prediction | More>> | ||||
1:1 ortholog | Itgb6 | 311061 | Q6AYF4 | Rattus norvegicus | Prediction | More>> | ||
1:1 ortholog | itgb6 | 100499533 | F1QGX0 | Danio rerio | Prediction | More>> |
ID | Variant | Type | Disease | Chromosome\Coordinate | Evidence |
---|---|---|---|---|---|
rs1429580834 | p.Gly2Glu | missense variant | - | NC_000002.12:g.160200059C>T | gnomAD |
NCI-TCGA novel | p.Gly2Arg | missense variant | - | NC_000002.12:g.160200060C>T | NCI-TCGA |
rs142866134 | p.Ile3Phe | missense variant | - | NC_000002.12:g.160200057T>A | ESP,ExAC |
NCI-TCGA novel | p.Glu4Lys | missense variant | - | NC_000002.12:g.160200054C>T | NCI-TCGA |
rs568630388 | p.Leu6Phe | missense variant | - | NC_000002.12:g.160200048G>A | 1000Genomes |
NCI-TCGA novel | p.Leu6IlePheSerTerUnkUnk | frameshift | - | NC_000002.12:g.160200015_160200048CATTCCTTCCTAGAAATAGAAAGAACAGGCAAAG>- | NCI-TCGA |
NCI-TCGA novel | p.Cys7Ter | stop gained | - | NC_000002.12:g.160200043G>T | NCI-TCGA |
NCI-TCGA novel | p.Leu8Met | missense variant | - | NC_000002.12:g.160200042G>T | NCI-TCGA |
rs750372730 | p.Phe9Leu | missense variant | - | NC_000002.12:g.160200037G>T | ExAC,TOPMed,gnomAD |
rs765208666 | p.Leu11Pro | missense variant | - | NC_000002.12:g.160200032A>G | ExAC,gnomAD |
rs1442512337 | p.Leu13Gln | missense variant | - | NC_000002.12:g.160200026A>T | gnomAD |
rs776446082 | p.Gly14Glu | missense variant | - | NC_000002.12:g.160200023C>T | ExAC,TOPMed,gnomAD |
rs370341448 | p.Gly14Arg | missense variant | - | NC_000002.12:g.160200024C>T | ESP,ExAC,TOPMed,gnomAD |
rs776446082 | p.Gly14Glu | missense variant | - | NC_000002.12:g.160200023C>T | NCI-TCGA |
rs188990572 | p.Arg15Lys | missense variant | - | NC_000002.12:g.160200020C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs144155990 | p.Asn16His | missense variant | - | NC_000002.12:g.160200018T>G | ESP,ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Asn16Lys | missense variant | - | NC_000002.12:g.160200016A>C | NCI-TCGA |
rs760097625 | p.Val19Ile | missense variant | - | NC_000002.12:g.160200009C>T | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Gln20Pro | missense variant | - | NC_000002.12:g.160200005T>G | NCI-TCGA |
COSM4911524 | p.Gly22Ser | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160199256C>T | NCI-TCGA Cosmic |
rs753809581 | p.Ala24Asp | missense variant | - | NC_000002.12:g.160199249G>T | ExAC,gnomAD |
rs1338078187 | p.Gly26Glu | missense variant | - | NC_000002.12:g.160199243C>T | gnomAD |
NCI-TCGA novel | p.Gly26Arg | missense variant | - | NC_000002.12:g.160199244C>T | NCI-TCGA |
NCI-TCGA novel | p.Ala28GlnPheSerTerUnkUnk | frameshift | - | NC_000002.12:g.160199238C>- | NCI-TCGA |
rs1455056622 | p.Glu29Gly | missense variant | - | NC_000002.12:g.160199234T>C | gnomAD |
rs933060964 | p.Thr30Ser | missense variant | - | NC_000002.12:g.160199231G>C | TOPMed |
rs933060964 | p.Thr30Asn | missense variant | - | NC_000002.12:g.160199231G>T | TOPMed |
rs1288818021 | p.Asp33Glu | missense variant | - | NC_000002.12:g.160199221G>T | TOPMed |
rs1447908074 | p.Cys34Ter | stop gained | - | NC_000002.12:g.160199218G>T | TOPMed |
rs1407406012 | p.Leu36Pro | missense variant | - | NC_000002.12:g.160199213A>G | gnomAD |
rs1456041794 | p.Ile37Val | missense variant | - | NC_000002.12:g.160199211T>C | TOPMed,gnomAD |
rs755954161 | p.Pro39Leu | missense variant | - | NC_000002.12:g.160199204G>A | ExAC,gnomAD |
rs755954161 | p.Pro39Leu | missense variant | - | NC_000002.12:g.160199204G>A | NCI-TCGA |
rs558509748 | p.Gln40Arg | missense variant | - | NC_000002.12:g.160199201T>C | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1406168951 | p.Gln40Lys | missense variant | - | NC_000002.12:g.160199202G>T | gnomAD |
rs558509748 | p.Gln40Leu | missense variant | - | NC_000002.12:g.160199201T>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs767191750 | p.Cys41Tyr | missense variant | - | NC_000002.12:g.160199198C>T | ExAC |
rs150547491 | p.Ala42Gly | missense variant | - | NC_000002.12:g.160199195G>C | ESP,ExAC,TOPMed,gnomAD |
rs755330939 | p.Trp43Ter | stop gained | - | NC_000002.12:g.160199191C>T | ExAC,TOPMed,gnomAD |
rs765905953 | p.Cys44Arg | missense variant | - | NC_000002.12:g.160199190A>G | ExAC,gnomAD |
rs763423532 | p.Ala45Val | missense variant | - | NC_000002.12:g.160199186G>A | ExAC,gnomAD |
rs1370036283 | p.Asn48Ser | missense variant | - | NC_000002.12:g.160196419T>C | gnomAD |
NCI-TCGA novel | p.Asn48Lys | missense variant | - | NC_000002.12:g.160196418A>C | NCI-TCGA |
rs1322939202 | p.Phe49Leu | missense variant | - | NC_000002.12:g.160196415A>T | TOPMed |
rs762386614 | p.Thr50Ala | missense variant | - | NC_000002.12:g.160196414T>C | ExAC,gnomAD |
NCI-TCGA novel | p.Thr50Ile | missense variant | - | NC_000002.12:g.160196413G>A | NCI-TCGA |
rs1014857218 | p.His51Tyr | missense variant | - | NC_000002.12:g.160196411G>A | TOPMed,gnomAD |
rs1420201963 | p.His51Leu | missense variant | - | NC_000002.12:g.160196410T>A | gnomAD |
rs1014857218 | p.His51Tyr | missense variant | - | NC_000002.12:g.160196411G>A | NCI-TCGA Cosmic |
rs761037603 | p.Ser53Pro | missense variant | - | NC_000002.12:g.160196405A>G | ExAC,TOPMed,gnomAD |
rs895833975 | p.Ser53Cys | missense variant | - | NC_000002.12:g.160196404G>C | TOPMed |
rs895833975 | p.Ser53Cys | missense variant | - | NC_000002.12:g.160196404G>C | NCI-TCGA Cosmic |
NCI-TCGA novel | p.Ser53Thr | missense variant | - | NC_000002.12:g.160196405A>T | NCI-TCGA |
NCI-TCGA novel | p.Gly54GlnPheSerTerUnkUnk | frameshift | - | NC_000002.12:g.160196403_160196404insATTGT | NCI-TCGA |
rs1270760123 | p.Val55Ala | missense variant | - | NC_000002.12:g.160196398A>G | gnomAD |
rs1482484963 | p.Gly56Ser | missense variant | - | NC_000002.12:g.160196396C>T | gnomAD |
rs143336326 | p.Gly56Asp | missense variant | - | NC_000002.12:g.160196395C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs774250804 | p.Glu57Lys | missense variant | - | NC_000002.12:g.160196393C>T | ExAC,TOPMed,gnomAD |
rs774250804 | p.Glu57Lys | missense variant | - | NC_000002.12:g.160196393C>T | NCI-TCGA,NCI-TCGA Cosmic |
rs1274368531 | p.Arg58Met | missense variant | - | NC_000002.12:g.160196389C>A | TOPMed,gnomAD |
rs1274368531 | p.Arg58Thr | missense variant | - | NC_000002.12:g.160196389C>G | TOPMed,gnomAD |
NCI-TCGA novel | p.Cys59Tyr | missense variant | - | NC_000002.12:g.160196386C>T | NCI-TCGA |
rs1378844949 | p.Asp60Glu | missense variant | - | NC_000002.12:g.160196382A>T | TOPMed |
rs1219149761 | p.Thr61Ile | missense variant | - | NC_000002.12:g.160196380G>A | TOPMed,gnomAD |
rs1219149761 | p.Thr61Asn | missense variant | - | NC_000002.12:g.160196380G>T | TOPMed,gnomAD |
rs748070197 | p.Pro62Leu | missense variant | - | NC_000002.12:g.160196377G>A | ExAC,gnomAD |
rs531441228 | p.Pro62Ser | missense variant | - | NC_000002.12:g.160196378G>A | 1000Genomes,ExAC,gnomAD |
rs531441228 | p.Pro62Ala | missense variant | - | NC_000002.12:g.160196378G>C | 1000Genomes,ExAC,gnomAD |
rs1350054159 | p.Asn64His | missense variant | - | NC_000002.12:g.160196372T>G | gnomAD |
rs139380804 | p.Asn64Lys | missense variant | - | NC_000002.12:g.160196370G>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs139380804 | p.Asn64Lys | missense variant | - | NC_000002.12:g.160196370G>C | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs369726068 | p.Leu65Ile | missense variant | - | NC_000002.12:g.160196369G>T | 1000Genomes,ExAC,TOPMed,gnomAD |
rs369726068 | p.Leu65Val | missense variant | - | NC_000002.12:g.160196369G>C | 1000Genomes,ExAC,TOPMed,gnomAD |
rs369726068 | p.Leu65Phe | missense variant | - | NC_000002.12:g.160196369G>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs764621080 | p.Cys70Arg | missense variant | - | NC_000002.12:g.160196354A>G | ExAC,TOPMed,gnomAD |
rs764621080 | p.Cys70Ser | missense variant | - | NC_000002.12:g.160196354A>T | ExAC,TOPMed,gnomAD |
rs1176834548 | p.Gln71Lys | missense variant | - | NC_000002.12:g.160196351G>T | gnomAD |
NCI-TCGA novel | p.Gln71Ter | stop gained | - | NC_000002.12:g.160196351G>A | NCI-TCGA |
rs913009965 | p.Ile75Phe | missense variant | - | NC_000002.12:g.160196339T>A | TOPMed |
rs764638718 | p.Glu76Ter | stop gained | - | NC_000002.12:g.160196336C>A | ExAC,TOPMed,gnomAD |
rs764638718 | p.Glu76Lys | missense variant | - | NC_000002.12:g.160196336C>T | ExAC,TOPMed,gnomAD |
rs1480709067 | p.Asn77Lys | missense variant | - | NC_000002.12:g.160196331G>C | gnomAD |
rs943658539 | p.Ser80Phe | missense variant | - | NC_000002.12:g.160196323G>A | TOPMed,gnomAD |
rs1460342706 | p.Val82Ile | missense variant | - | NC_000002.12:g.160196318C>T | TOPMed,gnomAD |
NCI-TCGA novel | p.Val82Leu | missense variant | - | NC_000002.12:g.160196318C>A | NCI-TCGA |
rs752967555 | p.Ile84Val | missense variant | - | NC_000002.12:g.160196312T>C | ExAC,gnomAD |
rs571733477 | p.Ile84Met | missense variant | - | NC_000002.12:g.160196310T>C | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1328875561 | p.Leu85Phe | missense variant | - | NC_000002.12:g.160196309G>A | gnomAD |
COSM1008251 | p.Leu85Ile | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160196309G>T | NCI-TCGA Cosmic |
rs759659602 | p.Asn87Ser | missense variant | - | NC_000002.12:g.160196302T>C | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Lys88Thr | missense variant | - | NC_000002.12:g.160196299T>G | NCI-TCGA |
rs770981055 | p.Leu90Val | missense variant | - | NC_000002.12:g.160196294G>C | ExAC,gnomAD |
rs1450395230 | p.Ser91Asn | missense variant | - | NC_000002.12:g.160196290C>T | TOPMed,gnomAD |
rs1450395230 | p.Ser91Ile | missense variant | - | NC_000002.12:g.160196290C>A | TOPMed,gnomAD |
rs374377727 | p.Ser91Gly | missense variant | - | NC_000002.12:g.160196291T>C | ESP |
rs200784593 | p.Val92Ile | missense variant | - | NC_000002.12:g.160196288C>T | 1000Genomes,ExAC,TOPMed,gnomAD |
rs200784593 | p.Val92Leu | missense variant | - | NC_000002.12:g.160196288C>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1268887120 | p.Arg94Lys | missense variant | - | NC_000002.12:g.160196281C>T | TOPMed |
COSM4085928 | p.Gln95His | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160196277C>A | NCI-TCGA Cosmic |
rs768539900 | p.Lys96Gln | missense variant | - | NC_000002.12:g.160196276T>G | ExAC,TOPMed,gnomAD |
rs375627531 | p.Asn97Ser | missense variant | - | NC_000002.12:g.160196272T>C | gnomAD |
rs545332900 | p.Ser98Cys | missense variant | - | NC_000002.12:g.160196270T>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs750388139 | p.Ser99Ala | missense variant | - | NC_000002.12:g.160196267A>C | ExAC,TOPMed,gnomAD |
rs771795596 | p.Asp100Glu | missense variant | - | NC_000002.12:g.160196262G>T | ExAC,TOPMed,gnomAD |
rs1445901435 | p.Ile101Val | missense variant | - | NC_000002.12:g.160196261T>C | gnomAD |
rs745503924 | p.Val102Phe | missense variant | - | NC_000002.12:g.160196258C>A | ExAC,gnomAD |
rs1456621730 | p.Val102Ala | missense variant | - | NC_000002.12:g.160196257A>G | TOPMed |
rs61758143 | p.Ala105Val | missense variant | - | NC_000002.12:g.160196248G>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs753334452 | p.Pro106Leu | missense variant | - | NC_000002.12:g.160196245G>A | ExAC,gnomAD |
rs778458175 | p.Gln107Ter | stop gained | - | NC_000002.12:g.160196243G>A | ExAC,TOPMed,gnomAD |
rs756642881 | p.Ser108Ile | missense variant | - | NC_000002.12:g.160196239C>A | ExAC,gnomAD |
rs371257499 | p.Ile110Thr | missense variant | - | NC_000002.12:g.160196233A>G | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs371257499 | p.Ile110Asn | missense variant | - | NC_000002.12:g.160196233A>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs1229767855 | p.Leu111Phe | missense variant | - | NC_000002.12:g.160196231G>A | TOPMed |
rs1014930748 | p.Leu111Arg | missense variant | - | NC_000002.12:g.160196230A>C | TOPMed |
rs759857053 | p.Leu113Ser | missense variant | - | NC_000002.12:g.160196224A>G | ExAC,gnomAD |
rs767745535 | p.Leu113Met | missense variant | - | NC_000002.12:g.160196225A>T | ExAC,TOPMed,gnomAD |
rs1382519914 | p.Pro115Gln | missense variant | - | NC_000002.12:g.160196218G>T | gnomAD |
rs567764082 | p.Gly116Arg | missense variant | - | NC_000002.12:g.160196216C>G | 1000Genomes,ExAC,gnomAD |
rs567764082 | p.Gly116Cys | missense variant | - | NC_000002.12:g.160196216C>A | 1000Genomes,ExAC,gnomAD |
rs544813266 | p.Ala118Val | missense variant | - | NC_000002.12:g.160195609G>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs758595294 | p.Gln122His | missense variant | - | NC_000002.12:g.160195596C>A | ExAC,gnomAD |
rs1337499144 | p.Gln122Arg | missense variant | - | NC_000002.12:g.160195597T>C | gnomAD |
rs758595294 | p.Gln122His | missense variant | - | NC_000002.12:g.160195596C>G | ExAC,gnomAD |
rs1322574269 | p.His124Arg | missense variant | - | NC_000002.12:g.160195591T>C | gnomAD |
rs765295259 | p.His124Gln | missense variant | - | NC_000002.12:g.160195590A>T | ExAC,gnomAD |
rs1406422933 | p.Val125Phe | missense variant | - | NC_000002.12:g.160195589C>A | gnomAD |
rs775303141 | p.Arg126His | missense variant | - | NC_000002.12:g.160195585C>T | ExAC,TOPMed,gnomAD |
rs760724592 | p.Arg126Cys | missense variant | - | NC_000002.12:g.160195586G>A | ExAC,gnomAD |
rs775303141 | p.Arg126Leu | missense variant | - | NC_000002.12:g.160195585C>A | ExAC,TOPMed,gnomAD |
rs1327113841 | p.Thr128Ser | missense variant | - | NC_000002.12:g.160195579G>C | TOPMed |
rs373385870 | p.Asp130Asn | missense variant | - | NC_000002.12:g.160195574C>T | ESP,ExAC,TOPMed,gnomAD |
rs1262966274 | p.Asp130Glu | missense variant | - | NC_000002.12:g.160195572G>C | TOPMed |
rs770759542 | p.Asp130Gly | missense variant | - | NC_000002.12:g.160195573T>C | ExAC,gnomAD |
rs748921832 | p.Tyr131Cys | missense variant | - | NC_000002.12:g.160195570T>C | ExAC,gnomAD |
rs369275471 | p.Pro132Leu | missense variant | - | NC_000002.12:g.160195567G>A | ESP,ExAC,TOPMed,gnomAD |
rs1473599554 | p.Val133Ala | missense variant | - | NC_000002.12:g.160195564A>G | TOPMed |
rs574179737 | p.Asp134Gly | missense variant | - | NC_000002.12:g.160195561T>C | 1000Genomes,ExAC,gnomAD |
rs747421856 | p.Leu135Ser | missense variant | - | NC_000002.12:g.160195558A>G | ExAC,TOPMed,gnomAD |
rs780364416 | p.Tyr136His | missense variant | - | NC_000002.12:g.160195556A>G | ExAC,gnomAD |
NCI-TCGA novel | p.Tyr137Ter | stop gained | - | NC_000002.12:g.160195551_160195552insCCTC | NCI-TCGA |
rs758685362 | p.Leu138Pro | missense variant | - | NC_000002.12:g.160195549A>G | ExAC,gnomAD |
rs750629583 | p.Met139Thr | missense variant | - | NC_000002.12:g.160195546A>G | ExAC,TOPMed,gnomAD |
rs1490234134 | p.Leu141His | missense variant | - | NC_000002.12:g.160195540A>T | gnomAD |
rs140015315 | p.Ala143Thr | missense variant | - | NC_000002.12:g.160195535C>T | ESP,ExAC,TOPMed,gnomAD |
rs140015315 | p.Ala143Thr | missense variant | Amelogenesis imperfecta 1H (AI1H) | NC_000002.12:g.160195535C>T | UniProt,dbSNP |
VAR_073328 | p.Ala143Thr | missense variant | Amelogenesis imperfecta 1H (AI1H) | NC_000002.12:g.160195535C>T | UniProt |
RCV000157638 | p.Ala143Thr | missense variant | Amelogenesis imperfecta, type IH (AI1H) | NC_000002.12:g.160195535C>T | ClinVar |
COSM3568368 | p.Ser144Phe | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160195531G>A | NCI-TCGA Cosmic |
rs1305834846 | p.Met145Val | missense variant | - | NC_000002.12:g.160195529T>C | TOPMed,gnomAD |
rs767381287 | p.Met145Thr | missense variant | - | NC_000002.12:g.160195528A>G | ExAC,gnomAD |
rs1337026770 | p.Asp147Asn | missense variant | - | NC_000002.12:g.160195523C>T | gnomAD |
NCI-TCGA novel | p.Asp148Asn | missense variant | - | NC_000002.12:g.160195520C>T | NCI-TCGA |
rs766276805 | p.Thr151Ala | missense variant | - | NC_000002.12:g.160195511T>C | ExAC,gnomAD |
rs1415659289 | p.Ile152Met | missense variant | - | NC_000002.12:g.160195506T>C | TOPMed |
rs938761545 | p.Glu154Ter | stop gained | - | NC_000002.12:g.160195502C>A | TOPMed,gnomAD |
rs1020941015 | p.Glu154Ala | missense variant | - | NC_000002.12:g.160195501T>G | TOPMed,gnomAD |
rs1365638497 | p.Leu155Arg | missense variant | - | NC_000002.12:g.160195498A>C | gnomAD |
rs773000820 | p.Gly156Val | missense variant | - | NC_000002.12:g.160195495C>A | ExAC,TOPMed,gnomAD |
rs573373997 | p.Arg158Trp | missense variant | - | NC_000002.12:g.160195490G>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs747631436 | p.Arg158Gln | missense variant | - | NC_000002.12:g.160195489C>T | ExAC,TOPMed,gnomAD |
rs776182333 | p.Leu159Phe | missense variant | - | NC_000002.12:g.160195487G>A | ExAC,gnomAD |
rs558188627 | p.Leu159Arg | missense variant | - | NC_000002.12:g.160195486A>C | 1000Genomes,ExAC,gnomAD |
rs747510097 | p.Lys161Glu | missense variant | - | NC_000002.12:g.160195481T>C | ExAC,TOPMed,gnomAD |
rs780454470 | p.Glu162Lys | missense variant | - | NC_000002.12:g.160195478C>T | ExAC,gnomAD |
rs147372514 | p.Glu162Asp | missense variant | - | NC_000002.12:g.160195476C>A | ESP,TOPMed,gnomAD |
rs539806416 | p.Met163Ile | missense variant | - | NC_000002.12:g.160195473C>A | 1000Genomes,ExAC,gnomAD |
NCI-TCGA novel | p.Ser164Pro | missense variant | - | NC_000002.12:g.160195472A>G | NCI-TCGA |
rs779037207 | p.Arg171Lys | missense variant | - | NC_000002.12:g.160195450C>T | ExAC,gnomAD |
rs377415826 | p.Arg171Ser | missense variant | - | NC_000002.12:g.160195449T>A | ESP,ExAC,TOPMed,gnomAD |
COSM4085926 | p.Leu172Pro | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160195447A>G | NCI-TCGA Cosmic |
rs373088517 | p.Gly173Ser | missense variant | - | NC_000002.12:g.160195445C>T | ESP,ExAC,gnomAD |
rs1387477826 | p.Gly173Ala | missense variant | - | NC_000002.12:g.160195444C>G | gnomAD |
rs755036686 | p.Gly175Arg | missense variant | - | NC_000002.12:g.160195439C>T | ExAC,TOPMed,gnomAD |
rs369951064 | p.Ser176Tyr | missense variant | - | NC_000002.12:g.160195435G>T | ESP,ExAC,TOPMed,gnomAD |
rs1185357592 | p.Ser176Pro | missense variant | - | NC_000002.12:g.160195436A>G | gnomAD |
rs1241333934 | p.Glu179Lys | missense variant | - | NC_000002.12:g.160195427C>T | gnomAD |
rs142717768 | p.Val182Ile | missense variant | - | NC_000002.12:g.160195418C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs1050990851 | p.Phe185Tyr | missense variant | - | NC_000002.12:g.160195408A>T | gnomAD |
rs1050990851 | p.Phe185Ser | missense variant | - | NC_000002.12:g.160195408A>G | gnomAD |
rs1404113499 | p.Phe185Leu | missense variant | - | NC_000002.12:g.160195407A>C | TOPMed |
rs375472275 | p.Val186Leu | missense variant | - | NC_000002.12:g.160195406C>A | ESP,ExAC,TOPMed,gnomAD |
rs375472275 | p.Val186Leu | missense variant | - | NC_000002.12:g.160195406C>G | ESP,ExAC,TOPMed,gnomAD |
rs750190939 | p.Thr188Ile | missense variant | - | NC_000002.12:g.160195399G>A | ExAC,TOPMed,gnomAD |
rs750190939 | p.Thr188Lys | missense variant | - | NC_000002.12:g.160195399G>T | ExAC,TOPMed,gnomAD |
rs755932139 | p.Pro190Gln | missense variant | - | NC_000002.12:g.160195393G>T | TOPMed,gnomAD |
rs1248844448 | p.Glu192Val | missense variant | - | NC_000002.12:g.160195387T>A | gnomAD |
NCI-TCGA novel | p.Glu192Lys | missense variant | - | NC_000002.12:g.160195388C>T | NCI-TCGA |
rs764843609 | p.Ala194Thr | missense variant | - | NC_000002.12:g.160195382C>T | ExAC,TOPMed,gnomAD |
rs1277066102 | p.Ala194Val | missense variant | - | NC_000002.12:g.160195381G>A | TOPMed |
rs764843609 | p.Ala194Ser | missense variant | - | NC_000002.12:g.160195382C>A | ExAC,TOPMed,gnomAD |
rs1038189073 | p.Asn195Lys | missense variant | - | NC_000002.12:g.160195377G>T | - |
rs730880298 | p.Pro196Ser | missense variant | - | NC_000002.12:g.160195376G>A | ExAC,gnomAD |
rs730880298 | p.Pro196Thr | missense variant | - | NC_000002.12:g.160195376G>T | ExAC,gnomAD |
rs941116570 | p.Pro196His | missense variant | - | NC_000002.12:g.160195375G>T | gnomAD |
RCV000157641 | p.Pro196Thr | missense variant | Amelogenesis imperfecta, type IH (AI1H) | NC_000002.12:g.160195376G>T | ClinVar |
rs372144143 | p.Ser198Gly | missense variant | - | NC_000002.12:g.160195370T>C | ESP,ExAC,gnomAD |
NCI-TCGA novel | p.Ser199Asn | missense variant | - | NC_000002.12:g.160174137C>T | NCI-TCGA |
rs946554296 | p.Ile200Val | missense variant | - | NC_000002.12:g.160174135T>C | TOPMed,gnomAD |
rs374721403 | p.Tyr202His | missense variant | - | NC_000002.12:g.160174129A>G | ESP,TOPMed |
rs935729522 | p.Tyr202Phe | missense variant | - | NC_000002.12:g.160174128T>A | TOPMed |
rs372264340 | p.Phe203Leu | missense variant | - | NC_000002.12:g.160174124G>C | ESP,ExAC,gnomAD |
rs1424112088 | p.Leu205Ter | stop gained | - | NC_000002.12:g.160174119A>T | gnomAD |
rs1479322018 | p.Pro206Leu | missense variant | - | NC_000002.12:g.160174116G>A | gnomAD |
rs772617473 | p.Pro206Ser | missense variant | - | NC_000002.12:g.160174117G>A | ExAC,gnomAD |
rs1199690484 | p.Thr207Ile | missense variant | - | NC_000002.12:g.160174113G>A | gnomAD |
rs561588576 | p.Gly209Ter | stop gained | - | NC_000002.12:g.160174108C>A | 1000Genomes,ExAC,gnomAD |
rs367990097 | p.Phe210Leu | missense variant | - | NC_000002.12:g.160174103G>T | ESP,ExAC,TOPMed,gnomAD |
rs1235642411 | p.Lys211Asn | missense variant | - | NC_000002.12:g.160174100C>G | TOPMed |
rs1203036584 | p.His212Asn | missense variant | - | NC_000002.12:g.160174099G>T | gnomAD |
rs1440017757 | p.Leu214Ser | missense variant | - | NC_000002.12:g.160174092A>G | gnomAD |
rs749561988 | p.Leu216Ser | missense variant | - | NC_000002.12:g.160174086A>G | ExAC,TOPMed,gnomAD |
rs1321852853 | p.Thr217Ala | missense variant | - | NC_000002.12:g.160174084T>C | gnomAD |
NCI-TCGA novel | p.Glu221Lys | missense variant | - | NC_000002.12:g.160174072C>T | NCI-TCGA |
rs944385067 | p.Arg222Ile | missense variant | - | NC_000002.12:g.160174068C>A | - |
rs1219980649 | p.Phe223Leu | missense variant | - | NC_000002.12:g.160174064G>C | gnomAD |
rs373488084 | p.Asn224Ser | missense variant | - | NC_000002.12:g.160174062T>C | ESP,ExAC,TOPMed,gnomAD |
rs912839150 | p.Glu225Lys | missense variant | - | NC_000002.12:g.160174060C>T | gnomAD |
rs758180810 | p.Lys228Asn | missense variant | - | NC_000002.12:g.160174049C>A | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Lys231Asn | missense variant | - | NC_000002.12:g.160174040T>G | NCI-TCGA |
rs543211346 | p.Ile232Ser | missense variant | - | NC_000002.12:g.160174038A>C | 1000Genomes,ExAC,gnomAD |
COSM1008248 | p.Ile232Met | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160174037A>C | NCI-TCGA Cosmic |
NCI-TCGA novel | p.Ser233Tyr | missense variant | - | NC_000002.12:g.160174035G>T | NCI-TCGA |
rs778657225 | p.Ala234Thr | missense variant | - | NC_000002.12:g.160174033C>T | ExAC |
rs1018582237 | p.Ala234Val | missense variant | - | NC_000002.12:g.160174032G>A | TOPMed |
NCI-TCGA novel | p.Asn235Ser | missense variant | - | NC_000002.12:g.160174029T>C | NCI-TCGA |
rs1176349010 | p.Thr238Arg | missense variant | - | NC_000002.12:g.160174020G>C | gnomAD |
rs140624114 | p.Glu240Lys | missense variant | - | NC_000002.12:g.160174015C>T | ESP,ExAC,TOPMed,gnomAD |
rs755742636 | p.Gly241Ser | missense variant | - | NC_000002.12:g.160174012C>T | ExAC,gnomAD |
rs752247019 | p.Gly242Arg | missense variant | - | NC_000002.12:g.160174009C>T | ExAC,gnomAD |
rs1239393732 | p.Phe243Cys | missense variant | - | NC_000002.12:g.160174005A>C | TOPMed,gnomAD |
rs1203575130 | p.Ala245Thr | missense variant | - | NC_000002.12:g.160174000C>T | TOPMed,gnomAD |
rs1265317930 | p.Ile246Val | missense variant | - | NC_000002.12:g.160173997T>C | gnomAD |
rs369609347 | p.Gln248Ter | stop gained | - | NC_000002.12:g.160173991G>A | ESP,ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Ala249Val | missense variant | - | NC_000002.12:g.160173987G>A | NCI-TCGA |
rs1316507140 | p.Ala250Thr | missense variant | - | NC_000002.12:g.160173985C>T | gnomAD |
rs528310931 | p.Val251Met | missense variant | - | NC_000002.12:g.160173982C>T | 1000Genomes,gnomAD |
rs528310931 | p.Val251Leu | missense variant | - | NC_000002.12:g.160173982C>A | 1000Genomes,gnomAD |
rs1211465275 | p.Lys253Glu | missense variant | - | NC_000002.12:g.160173976T>C | gnomAD |
rs541375604 | p.Glu254Gly | missense variant | - | NC_000002.12:g.160172729T>C | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1424429623 | p.Lys255Asn | missense variant | - | NC_000002.12:g.160172725T>G | TOPMed |
rs765694627 | p.Lys255Ile | missense variant | - | NC_000002.12:g.160172726T>A | ExAC,TOPMed,gnomAD |
rs765694627 | p.Lys255Arg | missense variant | - | NC_000002.12:g.160172726T>C | ExAC,TOPMed,gnomAD |
rs1370745345 | p.Ile256Phe | missense variant | - | NC_000002.12:g.160172724T>A | gnomAD |
rs532660177 | p.Ile256Thr | missense variant | - | NC_000002.12:g.160172723A>G | 1000Genomes,ExAC,TOPMed,gnomAD |
rs532660177 | p.Ile256Asn | missense variant | - | NC_000002.12:g.160172723A>T | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1428351211 | p.Gly257Arg | missense variant | - | NC_000002.12:g.160172721C>G | gnomAD |
rs149747755 | p.Arg259Trp | missense variant | - | NC_000002.12:g.160172715G>A | ESP,ExAC,TOPMed,gnomAD |
rs760839315 | p.Arg259Gln | missense variant | - | NC_000002.12:g.160172714C>T | ExAC,TOPMed,gnomAD |
rs149747755 | p.Arg259Gly | missense variant | - | NC_000002.12:g.160172715G>C | ESP,ExAC,TOPMed,gnomAD |
rs1318143553 | p.Asn260Lys | missense variant | - | NC_000002.12:g.160172710A>T | TOPMed |
rs775400949 | p.Asn260Asp | missense variant | - | NC_000002.12:g.160172712T>C | ExAC |
rs1268292637 | p.Leu263Phe | missense variant | - | NC_000002.12:g.160172703G>A | gnomAD |
rs749165480 | p.His264Tyr | missense variant | - | NC_000002.12:g.160172700G>A | ExAC,gnomAD |
rs139649173 | p.Val267Leu | missense variant | - | NC_000002.12:g.160172691C>G | ESP,ExAC,TOPMed |
rs1489486330 | p.Val267Gly | missense variant | - | NC_000002.12:g.160172690A>C | TOPMed,gnomAD |
rs1305560456 | p.Asp271Glu | missense variant | - | NC_000002.12:g.160172677A>T | gnomAD |
rs747875880 | p.Asp271Gly | missense variant | - | NC_000002.12:g.160172678T>C | ExAC,gnomAD |
rs747875880 | p.Asp271Ala | missense variant | - | NC_000002.12:g.160172678T>G | ExAC,gnomAD |
COSM3568367 | p.Asp271Asn | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160172679C>T | NCI-TCGA Cosmic |
rs61737770 | p.Asp273Glu | missense variant | - | NC_000002.12:g.160172671A>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs751132914 | p.Ser274Cys | missense variant | - | NC_000002.12:g.160172669G>C | ExAC |
NCI-TCGA novel | p.Ser274Phe | missense variant | - | NC_000002.12:g.160172669G>A | NCI-TCGA |
rs730882118 | p.His275Gln | missense variant | - | NC_000002.12:g.160172665A>T | - |
RCV000157639 | p.His275Gln | missense variant | Amelogenesis imperfecta, type IH (AI1H) | NC_000002.12:g.160172665A>T | ClinVar |
rs1336914628 | p.Phe276Tyr | missense variant | - | NC_000002.12:g.160172663A>T | TOPMed |
rs1218889954 | p.Gly277Arg | missense variant | - | NC_000002.12:g.160172661C>G | gnomAD |
rs1300871316 | p.Met278Ile | missense variant | - | NC_000002.12:g.160172656C>T | gnomAD |
rs1406315767 | p.Asp279Val | missense variant | - | NC_000002.12:g.160172654T>A | gnomAD |
NCI-TCGA novel | p.Asp279Tyr | missense variant | - | NC_000002.12:g.160172655C>A | NCI-TCGA |
NCI-TCGA novel | p.Ser280ThrPheSerTerUnk | frameshift | - | NC_000002.12:g.160172651C>- | NCI-TCGA |
rs1461862005 | p.Lys281Asn | missense variant | - | NC_000002.12:g.160172647T>A | TOPMed,gnomAD |
rs1444999650 | p.Leu282Gln | missense variant | - | NC_000002.12:g.160172645A>T | TOPMed |
rs143852527 | p.Leu282Val | missense variant | - | NC_000002.12:g.160172646G>C | ESP,ExAC,TOPMed,gnomAD |
rs762290626 | p.Ala283Pro | missense variant | - | NC_000002.12:g.160172643C>G | ExAC,gnomAD |
rs576531469 | p.Val286Ile | missense variant | - | NC_000002.12:g.160172634C>T | 1000Genomes,ExAC,TOPMed,gnomAD |
rs576531469 | p.Val286Leu | missense variant | - | NC_000002.12:g.160172634C>G | 1000Genomes,ExAC,TOPMed,gnomAD |
rs775695114 | p.Pro288Ser | missense variant | - | NC_000002.12:g.160172628G>A | ExAC,gnomAD |
rs772038274 | p.Pro288Leu | missense variant | - | NC_000002.12:g.160172627G>A | ExAC,TOPMed,gnomAD |
rs561446961 | p.Asn289His | missense variant | - | NC_000002.12:g.160172625T>G | 1000Genomes,ExAC,TOPMed,gnomAD |
rs769665409 | p.Asp290Glu | missense variant | - | NC_000002.12:g.160172620G>T | ExAC,TOPMed,gnomAD |
rs144253582 | p.Gly291Arg | missense variant | - | NC_000002.12:g.160172619C>T | 1000Genomes,ExAC,TOPMed,gnomAD |
rs887381626 | p.Leu295Ser | missense variant | - | NC_000002.12:g.160172606A>G | gnomAD |
rs1299690741 | p.Leu295Phe | missense variant | - | NC_000002.12:g.160172605C>A | TOPMed |
rs188645370 | p.Asp296Gly | missense variant | - | NC_000002.12:g.160172603T>C | 1000Genomes,ExAC,gnomAD |
COSM1008246 | p.Asp296Asn | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160172604C>T | NCI-TCGA Cosmic |
rs768415795 | p.Ser297Arg | missense variant | - | NC_000002.12:g.160172599G>T | ExAC,TOPMed,gnomAD |
rs746639859 | p.Asn299Ser | missense variant | - | NC_000002.12:g.160172594T>C | ExAC,TOPMed,gnomAD |
rs779692470 | p.Glu300Lys | missense variant | - | NC_000002.12:g.160172592C>T | ExAC,gnomAD |
RCV000201256 | p.Glu300Lys | missense variant | Adolescent alopeciam dentogingival abnormalitites and intellectual disability | NC_000002.12:g.160172592C>T | ClinVar |
rs1310602357 | p.Tyr301Phe | missense variant | - | NC_000002.12:g.160172588T>A | TOPMed |
rs1391345733 | p.Tyr301His | missense variant | - | NC_000002.12:g.160172589A>G | gnomAD |
rs1395024664 | p.Met303Val | missense variant | - | NC_000002.12:g.160172583T>C | TOPMed,gnomAD |
rs371374688 | p.Val306Leu | missense variant | - | NC_000002.12:g.160172574C>G | ESP,ExAC,TOPMed,gnomAD |
COSM1400386 | p.Leu307Phe | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160172569C>A | NCI-TCGA Cosmic |
rs757895371 | p.Glu308Asp | missense variant | - | NC_000002.12:g.160169305T>G | ExAC,gnomAD |
rs1189419812 | p.Thr311Ala | missense variant | - | NC_000002.12:g.160169298T>C | gnomAD |
rs1442752369 | p.Gly313Arg | missense variant | - | NC_000002.12:g.160169292C>T | gnomAD |
rs1260682322 | p.Gln314Arg | missense variant | - | NC_000002.12:g.160169288T>C | gnomAD |
rs1286063802 | p.Ile316Ser | missense variant | - | NC_000002.12:g.160169282A>C | gnomAD |
rs753053909 | p.Val320Glu | missense variant | - | NC_000002.12:g.160169270A>T | ExAC,TOPMed,gnomAD |
rs753053909 | p.Val320Ala | missense variant | - | NC_000002.12:g.160169270A>G | ExAC,TOPMed,gnomAD |
rs138313490 | p.Asn323Lys | missense variant | - | NC_000002.12:g.160169260G>T | ESP,ExAC,TOPMed,gnomAD |
rs751699169 | p.Val324Met | missense variant | - | NC_000002.12:g.160169259C>T | ExAC,TOPMed,gnomAD |
rs1453707252 | p.Ile327Phe | missense variant | - | NC_000002.12:g.160169250T>A | TOPMed |
NCI-TCGA novel | p.Ile327Met | missense variant | - | NC_000002.12:g.160169248G>C | NCI-TCGA |
rs1287594216 | p.Ile327Ser | missense variant | - | NC_000002.12:g.160169249A>C | TOPMed |
rs762957132 | p.Phe328Ser | missense variant | - | NC_000002.12:g.160169246A>G | ExAC,gnomAD |
rs764045213 | p.Ala329Thr | missense variant | - | NC_000002.12:g.160169244C>T | ExAC,TOPMed,gnomAD |
rs760420082 | p.Ala329Gly | missense variant | - | NC_000002.12:g.160169243G>C | ExAC |
rs1381679184 | p.Val330Glu | missense variant | - | NC_000002.12:g.160169240A>T | TOPMed |
rs771900116 | p.Gln332Arg | missense variant | - | NC_000002.12:g.160169234T>C | ExAC,gnomAD |
rs142185271 | p.Glu333Gly | missense variant | - | NC_000002.12:g.160169231T>C | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs774070136 | p.Gln334Lys | missense variant | - | NC_000002.12:g.160169229G>T | ExAC |
rs770567732 | p.His336Asn | missense variant | - | NC_000002.12:g.160169223G>T | ExAC,gnomAD |
rs770567732 | p.His336Tyr | missense variant | - | NC_000002.12:g.160169223G>A | ExAC,gnomAD |
rs1321753703 | p.Tyr338Cys | missense variant | - | NC_000002.12:g.160169216T>C | TOPMed |
rs113506485 | p.Asn340Thr | missense variant | - | NC_000002.12:g.160142070T>G | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs113506485 | p.Asn340Ser | missense variant | - | NC_000002.12:g.160142070T>C | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs140967203 | p.Ala342Thr | missense variant | - | NC_000002.12:g.160142065C>T | ESP,ExAC,TOPMed,gnomAD |
rs148922939 | p.Leu344Phe | missense variant | - | NC_000002.12:g.160142059G>A | ESP,ExAC,TOPMed,gnomAD |
rs148922939 | p.Leu344Val | missense variant | - | NC_000002.12:g.160142059G>C | ESP,ExAC,TOPMed,gnomAD |
rs762398057 | p.Ala348Val | missense variant | - | NC_000002.12:g.160142046G>A | ExAC,TOPMed,gnomAD |
rs772743429 | p.Val350Ile | missense variant | - | NC_000002.12:g.160142041C>T | ExAC,gnomAD |
rs1047205910 | p.Leu353His | missense variant | - | NC_000002.12:g.160142031A>T | TOPMed |
rs748688893 | p.Gln354Leu | missense variant | - | NC_000002.12:g.160142028T>A | ExAC,TOPMed,gnomAD |
rs770266214 | p.Gln354Ter | stop gained | - | NC_000002.12:g.160142029G>A | ExAC |
rs1197184529 | p.Lys355Thr | missense variant | - | NC_000002.12:g.160142025T>G | gnomAD |
rs769024553 | p.Gly358Arg | missense variant | - | NC_000002.12:g.160142017C>T | ExAC,TOPMed,gnomAD |
rs1374128495 | p.Leu361Pro | missense variant | - | NC_000002.12:g.160142007A>G | TOPMed |
rs1437007812 | p.Ile365Val | missense variant | - | NC_000002.12:g.160141996T>C | TOPMed |
rs780288634 | p.Ala367Pro | missense variant | - | NC_000002.12:g.160141990C>G | ExAC,gnomAD |
rs1335141872 | p.Tyr368Cys | missense variant | - | NC_000002.12:g.160141986T>C | gnomAD |
NCI-TCGA novel | p.Glu370Lys | missense variant | - | NC_000002.12:g.160138199C>T | NCI-TCGA |
NCI-TCGA novel | p.Glu370Ter | stop gained | - | NC_000002.12:g.160138199C>A | NCI-TCGA |
rs747415493 | p.Arg372Trp | missense variant | - | NC_000002.12:g.160138193G>A | ExAC,TOPMed,gnomAD |
rs780376574 | p.Arg372Gln | missense variant | - | NC_000002.12:g.160138192C>T | ExAC,TOPMed,gnomAD |
rs1475767024 | p.Ser373Phe | missense variant | - | NC_000002.12:g.160138189G>A | gnomAD |
NCI-TCGA novel | p.Ser373Cys | missense variant | - | NC_000002.12:g.160138189G>C | NCI-TCGA |
rs778933431 | p.Glu374Val | missense variant | - | NC_000002.12:g.160138186T>A | ExAC,gnomAD |
NCI-TCGA novel | p.Glu374Lys | missense variant | - | NC_000002.12:g.160138187C>T | NCI-TCGA |
rs181269473 | p.Glu374Ter | stop gained | - | NC_000002.12:g.160138187C>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1211021472 | p.Val375Met | missense variant | - | NC_000002.12:g.160138184C>T | gnomAD |
COSM476097 | p.Glu376Gln | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160138181C>G | NCI-TCGA Cosmic |
rs757370505 | p.Glu378Lys | missense variant | - | NC_000002.12:g.160138175C>T | ExAC,gnomAD |
rs921918641 | p.Gly381Glu | missense variant | - | NC_000002.12:g.160138165C>T | TOPMed,gnomAD |
rs1354382788 | p.Thr383Pro | missense variant | - | NC_000002.12:g.160138160T>G | TOPMed,gnomAD |
rs1354382788 | p.Thr383Ser | missense variant | - | NC_000002.12:g.160138160T>A | TOPMed,gnomAD |
rs753916892 | p.Gly385Arg | missense variant | - | NC_000002.12:g.160138154C>T | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Gly385Glu | missense variant | - | NC_000002.12:g.160138153C>T | NCI-TCGA |
rs781307303 | p.Leu386Phe | missense variant | - | NC_000002.12:g.160138151G>A | ExAC,gnomAD |
NCI-TCGA novel | p.Asn387Ter | frameshift | - | NC_000002.12:g.160138148_160138149insA | NCI-TCGA |
NCI-TCGA novel | p.Asn387His | missense variant | - | NC_000002.12:g.160138148T>G | NCI-TCGA |
rs1303080299 | p.Leu388Val | missense variant | - | NC_000002.12:g.160138145A>C | gnomAD |
rs1358107510 | p.Phe390Leu | missense variant | - | NC_000002.12:g.160138139A>G | TOPMed,gnomAD |
rs1201159309 | p.Thr391Ala | missense variant | - | NC_000002.12:g.160138136T>C | gnomAD |
rs766195598 | p.Ala392Thr | missense variant | - | NC_000002.12:g.160138133C>T | ExAC,gnomAD |
rs374723421 | p.Ala392Val | missense variant | - | NC_000002.12:g.160138132G>A | ESP,ExAC,TOPMed,gnomAD |
rs766195598 | p.Ala392Pro | missense variant | - | NC_000002.12:g.160138133C>G | ExAC,gnomAD |
rs750105853 | p.Ile393Val | missense variant | - | NC_000002.12:g.160138130T>C | ExAC,gnomAD |
rs764751218 | p.Cys394Arg | missense variant | - | NC_000002.12:g.160138127A>G | ExAC,gnomAD |
rs1422449131 | p.Asn396Asp | missense variant | - | NC_000002.12:g.160138121T>C | gnomAD |
rs776089189 | p.Gly397Ser | missense variant | - | NC_000002.12:g.160138118C>T | ExAC,gnomAD |
rs764634066 | p.Thr398Ala | missense variant | - | NC_000002.12:g.160138115T>C | ExAC,TOPMed,gnomAD |
rs764634066 | p.Thr398Pro | missense variant | - | NC_000002.12:g.160138115T>G | ExAC,TOPMed,gnomAD |
rs761158424 | p.Leu399Val | missense variant | - | NC_000002.12:g.160138112G>C | ExAC,TOPMed,gnomAD |
rs1488654094 | p.Gln401Ter | stop gained | - | NC_000002.12:g.160138106G>A | gnomAD |
rs772489907 | p.His402Arg | missense variant | - | NC_000002.12:g.160138102T>C | ExAC,TOPMed,gnomAD |
rs746158392 | p.His402Gln | missense variant | - | NC_000002.12:g.160138101G>T | ExAC,TOPMed,gnomAD |
rs772489907 | p.His402Pro | missense variant | - | NC_000002.12:g.160138102T>G | ExAC,TOPMed,gnomAD |
COSM1325836 | p.His402Gln | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160138101G>C | NCI-TCGA Cosmic |
COSM1211047 | p.Lys404Asn | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160138095C>A | NCI-TCGA Cosmic |
COSM441311 | p.Lys404Asn | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160138095C>G | NCI-TCGA Cosmic |
rs774654149 | p.Lys405Ile | missense variant | - | NC_000002.12:g.160138093T>A | ExAC,gnomAD |
rs147811874 | p.Ser407Tyr | missense variant | - | NC_000002.12:g.160138087G>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs1279696049 | p.His408Asn | missense variant | - | NC_000002.12:g.160138085G>T | gnomAD |
rs755020309 | p.Met409Val | missense variant | - | NC_000002.12:g.160138082T>C | ExAC,TOPMed,gnomAD |
rs755020309 | p.Met409Leu | missense variant | - | NC_000002.12:g.160138082T>G | ExAC,TOPMed,gnomAD |
rs1340840158 | p.Lys410Glu | missense variant | - | NC_000002.12:g.160138079T>C | gnomAD |
rs746951303 | p.Asp413Asn | missense variant | - | NC_000002.12:g.160138070C>T | ExAC |
rs1206326219 | p.Thr414Pro | missense variant | - | NC_000002.12:g.160138067T>G | TOPMed |
rs779801184 | p.Thr414Arg | missense variant | - | NC_000002.12:g.160138066G>C | ExAC,gnomAD |
rs756971112 | p.Ala415Ser | missense variant | - | NC_000002.12:g.160137851C>A | ExAC,gnomAD |
rs1312246698 | p.Phe417Cys | missense variant | - | NC_000002.12:g.160137844A>C | gnomAD |
rs144315908 | p.Ser418Arg | missense variant | - | NC_000002.12:g.160137840G>T | ESP,ExAC,TOPMed,gnomAD |
rs755642266 | p.Val419Leu | missense variant | - | NC_000002.12:g.160137839C>G | ExAC,TOPMed,gnomAD |
rs755642266 | p.Val419Met | missense variant | - | NC_000002.12:g.160137839C>T | ExAC,TOPMed,gnomAD |
rs1333730175 | p.Val421Leu | missense variant | - | NC_000002.12:g.160137833C>G | gnomAD |
rs201585236 | p.Asn422Asp | missense variant | - | NC_000002.12:g.160137830T>C | ExAC,gnomAD |
rs1401813627 | p.Pro424Leu | missense variant | - | NC_000002.12:g.160137823G>A | TOPMed,gnomAD |
rs1460296616 | p.His425Arg | missense variant | - | NC_000002.12:g.160137820T>C | TOPMed |
rs763356279 | p.Glu427Lys | missense variant | - | NC_000002.12:g.160137815C>T | ExAC,gnomAD |
rs763356279 | p.Glu427Gln | missense variant | - | NC_000002.12:g.160137815C>G | ExAC,gnomAD |
rs950615749 | p.Arg428Lys | missense variant | - | NC_000002.12:g.160137811C>T | TOPMed,gnomAD |
rs1157575873 | p.Ser430Arg | missense variant | - | NC_000002.12:g.160137804G>T | TOPMed |
rs773594504 | p.Arg431Ser | missense variant | - | NC_000002.12:g.160137801C>A | ExAC,gnomAD |
NCI-TCGA novel | p.His432Tyr | missense variant | - | NC_000002.12:g.160137800G>A | NCI-TCGA |
rs61748239 | p.Ile433Met | missense variant | - | NC_000002.12:g.160137795A>C | ESP,ExAC,TOPMed,gnomAD |
rs761994942 | p.Ile433Thr | missense variant | - | NC_000002.12:g.160137796A>G | ExAC,gnomAD |
rs770103682 | p.Ile433Val | missense variant | - | NC_000002.12:g.160137797T>C | ExAC,TOPMed,gnomAD |
rs745790038 | p.Ile434Val | missense variant | - | NC_000002.12:g.160137794T>C | ExAC,gnomAD |
rs745790038 | p.Ile434Leu | missense variant | - | NC_000002.12:g.160137794T>G | ExAC,gnomAD |
rs2305820 | p.Pro437Thr | missense variant | - | NC_000002.12:g.160137785G>T | UniProt,dbSNP |
VAR_049636 | p.Pro437Thr | missense variant | - | NC_000002.12:g.160137785G>T | UniProt |
rs2305820 | p.Pro437Thr | missense variant | - | NC_000002.12:g.160137785G>T | 1000Genomes,ExAC,gnomAD |
rs61737764 | p.Val438Met | missense variant | - | NC_000002.12:g.160137782C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Val438AlaPheSerTerUnkUnk | frameshift | - | NC_000002.12:g.160137739_160137781CATTCTGGGCTGACAAGTAATTCCAGGGCATCCCCCAGCCCCA>- | NCI-TCGA |
rs557230094 | p.Gly439Glu | missense variant | - | NC_000002.12:g.160137778C>T | 1000Genomes,ExAC,gnomAD |
rs1405236795 | p.Leu440Gln | missense variant | - | NC_000002.12:g.160137775A>T | TOPMed |
COSM1400385 | p.Gly441TrpPheSerTerUnkUnk | frameshift | Variant assessed as Somatic; HIGH impact. | NC_000002.12:g.160137773_160137774insA | NCI-TCGA Cosmic |
rs1338460810 | p.Gly441Ala | missense variant | - | NC_000002.12:g.160137772C>G | TOPMed |
rs755729961 | p.Asp442Asn | missense variant | - | NC_000002.12:g.160137770C>T | ExAC,gnomAD |
rs752297911 | p.Ala443Asp | missense variant | - | NC_000002.12:g.160137766G>T | ExAC,gnomAD |
rs1332447279 | p.Ala443Thr | missense variant | - | NC_000002.12:g.160137767C>T | gnomAD |
rs1340786035 | p.Leu446Phe | missense variant | - | NC_000002.12:g.160137756T>A | TOPMed |
rs780549686 | p.Val448Ala | missense variant | - | NC_000002.12:g.160137751A>G | ExAC,gnomAD |
rs755571854 | p.Glu451Gly | missense variant | - | NC_000002.12:g.160137742T>C | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Glu451Ter | stop gained | - | NC_000002.12:g.160137743C>A | NCI-TCGA |
rs1382170524 | p.Cys452Arg | missense variant | - | NC_000002.12:g.160137740A>G | TOPMed,gnomAD |
rs1159163609 | p.Asn453Lys | missense variant | - | NC_000002.12:g.160137735G>T | gnomAD |
rs201552904 | p.Asp455Asn | missense variant | - | NC_000002.12:g.160137731C>T | ExAC,TOPMed,gnomAD |
rs201552904 | p.Asp455Tyr | missense variant | - | NC_000002.12:g.160137731C>A | ExAC,TOPMed,gnomAD |
rs765605951 | p.Cys456Phe | missense variant | - | NC_000002.12:g.160137727C>A | ExAC,TOPMed,gnomAD |
rs765605951 | p.Cys456Tyr | missense variant | - | NC_000002.12:g.160137727C>T | ExAC,TOPMed,gnomAD |
rs1261992701 | p.Gln457Arg | missense variant | - | NC_000002.12:g.160137724T>C | gnomAD |
rs200295975 | p.Gln457Ter | stop gained | - | NC_000002.12:g.160137725G>A | ExAC,TOPMed,gnomAD |
COSM1400384 | p.Glu459Ter | stop gained | Variant assessed as Somatic; HIGH impact. | NC_000002.12:g.160137719C>A | NCI-TCGA Cosmic |
rs768624598 | p.Val460Leu | missense variant | - | NC_000002.12:g.160137716C>G | ExAC,gnomAD |
rs768624598 | p.Val460Leu | missense variant | - | NC_000002.12:g.160137716C>A | ExAC,gnomAD |
rs760749196 | p.Glu461Gln | missense variant | - | NC_000002.12:g.160137713C>G | ExAC,gnomAD |
rs1437561442 | p.Asn463Tyr | missense variant | - | NC_000002.12:g.160137707T>A | TOPMed |
rs770815372 | p.Ser464Ile | missense variant | - | NC_000002.12:g.160137703C>A | ExAC,TOPMed,gnomAD |
rs1282738944 | p.Ser465Thr | missense variant | - | NC_000002.12:g.160137701A>T | gnomAD |
rs1030364807 | p.Lys466Glu | missense variant | - | NC_000002.12:g.160137698T>C | TOPMed |
rs749120125 | p.Lys466Asn | missense variant | - | NC_000002.12:g.160137696T>A | ExAC,gnomAD |
rs996563498 | p.Cys467Phe | missense variant | - | NC_000002.12:g.160137694C>A | TOPMed |
rs1277804797 | p.His468Leu | missense variant | - | NC_000002.12:g.160137691T>A | gnomAD |
rs1356386845 | p.His468Tyr | missense variant | - | NC_000002.12:g.160137692G>A | gnomAD |
rs142197545 | p.His469Asn | missense variant | - | NC_000002.12:g.160137689G>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs55841905 | p.Gly470Arg | missense variant | - | NC_000002.12:g.160137686C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs148881693 | p.Gly470Val | missense variant | - | NC_000002.12:g.160137685C>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs746489935 | p.Asn471Ser | missense variant | - | NC_000002.12:g.160137682T>C | ExAC,gnomAD |
rs750875825 | p.Gly472Asp | missense variant | - | NC_000002.12:g.160137679C>T | ExAC,TOPMed,gnomAD |
rs758952593 | p.Gly472Ser | missense variant | - | NC_000002.12:g.160137680C>T | ExAC,TOPMed,gnomAD |
rs750875825 | p.Gly472Ala | missense variant | - | NC_000002.12:g.160137679C>G | ExAC,TOPMed,gnomAD |
rs758952593 | p.Gly472Cys | missense variant | - | NC_000002.12:g.160137680C>A | ExAC,TOPMed,gnomAD |
rs765694694 | p.Ser473Phe | missense variant | - | NC_000002.12:g.160137676G>A | ExAC,TOPMed,gnomAD |
rs373568907 | p.Gln475Arg | missense variant | - | NC_000002.12:g.160137670T>C | ESP,ExAC,TOPMed,gnomAD |
rs1194548328 | p.Cys476Arg | missense variant | - | NC_000002.12:g.160137668A>G | gnomAD |
rs570810791 | p.Gly477Val | missense variant | - | NC_000002.12:g.160137664C>A | 1000Genomes,ExAC,gnomAD |
rs570810791 | p.Gly477Ala | missense variant | - | NC_000002.12:g.160137664C>G | 1000Genomes,ExAC,gnomAD |
rs1335898880 | p.Cys479Arg | missense variant | - | NC_000002.12:g.160137659A>G | gnomAD |
rs760699404 | p.Ala480Ser | missense variant | - | NC_000002.12:g.160137656C>A | ExAC,gnomAD |
rs775516477 | p.Ala480Val | missense variant | - | NC_000002.12:g.160137655G>A | ExAC,gnomAD |
NCI-TCGA novel | p.Ala480LeuPheSerTerUnkUnk | frameshift | - | NC_000002.12:g.160137656_160137657CA>- | NCI-TCGA |
rs1225916314 | p.Cys481Tyr | missense variant | - | NC_000002.12:g.160137652C>T | TOPMed |
rs762861083 | p.His482Gln | missense variant | - | NC_000002.12:g.160137648G>T | ExAC,TOPMed,gnomAD |
rs766349364 | p.His482Asn | missense variant | - | NC_000002.12:g.160137650G>T | ExAC,TOPMed,gnomAD |
rs1194415476 | p.Gly484Asp | missense variant | - | NC_000002.12:g.160137643C>T | TOPMed |
rs1329310318 | p.His485Gln | missense variant | - | NC_000002.12:g.160137639G>T | gnomAD |
rs147011033 | p.Met486Val | missense variant | - | NC_000002.12:g.160137638T>C | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs193920975 | p.Gly487Glu | missense variant | - | NC_000002.12:g.160137634C>T | gnomAD |
rs769477320 | p.Gly487Arg | missense variant | - | NC_000002.12:g.160137635C>T | ExAC,gnomAD |
rs193920975 | p.Gly487Val | missense variant | - | NC_000002.12:g.160137634C>A | gnomAD |
rs769477320 | p.Gly487Trp | missense variant | - | NC_000002.12:g.160137635C>A | ExAC,gnomAD |
RCV000149009 | p.Gly487Glu | missense variant | Malignant tumor of prostate | NC_000002.12:g.160137634C>T | ClinVar |
rs147828856 | p.Pro488Thr | missense variant | - | NC_000002.12:g.160137632G>T | ESP,ExAC |
rs369831997 | p.Arg489His | missense variant | - | NC_000002.12:g.160137628C>T | ESP,ExAC,TOPMed,gnomAD |
rs369831997 | p.Arg489Leu | missense variant | - | NC_000002.12:g.160137628C>A | ESP,ExAC,TOPMed,gnomAD |
rs776181453 | p.Arg489Cys | missense variant | - | NC_000002.12:g.160137629G>A | ExAC,TOPMed,gnomAD |
rs374801905 | p.Glu494Gln | missense variant | - | NC_000002.12:g.160137614C>G | ESP,ExAC,TOPMed,gnomAD |
rs374801905 | p.Glu494Lys | missense variant | - | NC_000002.12:g.160137614C>T | ESP,ExAC,TOPMed,gnomAD |
rs1201576711 | p.Glu494Ala | missense variant | - | NC_000002.12:g.160137613T>G | gnomAD |
rs1237908560 | p.Met496Leu | missense variant | - | NC_000002.12:g.160137608T>G | gnomAD |
rs1461342856 | p.Leu497Met | missense variant | - | NC_000002.12:g.160137605G>T | TOPMed |
COSM1400382 | p.Leu497Pro | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160137604A>G | NCI-TCGA Cosmic |
rs1320329851 | p.Ser498Arg | missense variant | - | NC_000002.12:g.160137600G>T | gnomAD |
rs372571486 | p.Ser498Asn | missense variant | - | NC_000002.12:g.160137601C>T | ESP,ExAC,gnomAD |
rs562815517 | p.Thr499Ala | missense variant | - | NC_000002.12:g.160137599T>C | 1000Genomes,ExAC,gnomAD |
rs1218788898 | p.Ser501Tyr | missense variant | - | NC_000002.12:g.160137592G>T | gnomAD |
rs756336739 | p.Glu504Asp | missense variant | - | NC_000002.12:g.160137582C>A | ExAC |
rs909210743 | p.Ala505Thr | missense variant | - | NC_000002.12:g.160137581C>T | gnomAD |
rs752829523 | p.Pro506Leu | missense variant | - | NC_000002.12:g.160137577G>A | ExAC,TOPMed,gnomAD |
rs983417389 | p.Pro506Ala | missense variant | - | NC_000002.12:g.160137578G>C | gnomAD |
rs752829523 | p.Pro506Gln | missense variant | - | NC_000002.12:g.160137577G>T | ExAC,TOPMed,gnomAD |
rs1329111126 | p.Asp507His | missense variant | - | NC_000002.12:g.160137575C>G | gnomAD |
rs917818547 | p.His508Asn | missense variant | - | NC_000002.12:g.160137572G>T | TOPMed,gnomAD |
rs1302648317 | p.His508Arg | missense variant | - | NC_000002.12:g.160137571T>C | TOPMed |
rs767576153 | p.Pro509His | missense variant | - | NC_000002.12:g.160137568G>T | ExAC,gnomAD |
rs767576153 | p.Pro509Arg | missense variant | - | NC_000002.12:g.160137568G>C | ExAC,gnomAD |
NCI-TCGA novel | p.Ser510Phe | missense variant | - | NC_000002.12:g.160137565G>A | NCI-TCGA |
rs1326345622 | p.Ser512Asn | missense variant | - | NC_000002.12:g.160137559C>T | TOPMed |
rs759543622 | p.Ser512Arg | missense variant | - | NC_000002.12:g.160137558G>T | ExAC,gnomAD |
rs978656099 | p.Gly513Glu | missense variant | - | NC_000002.12:g.160137556C>T | TOPMed |
rs199564092 | p.Gly513Arg | missense variant | - | NC_000002.12:g.160137557C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs1176108647 | p.Arg514Ser | missense variant | - | NC_000002.12:g.160137552C>A | TOPMed,gnomAD |
rs765183944 | p.Arg514Lys | missense variant | - | NC_000002.12:g.160137553C>T | ExAC,TOPMed,gnomAD |
rs1455046465 | p.Gly515Cys | missense variant | - | NC_000002.12:g.160137551C>A | gnomAD |
rs1290541705 | p.Gly515Val | missense variant | - | NC_000002.12:g.160137550C>A | TOPMed |
rs1489665110 | p.Asp516Asn | missense variant | - | NC_000002.12:g.160137548C>T | TOPMed |
rs768254862 | p.Gly520Val | missense variant | - | NC_000002.12:g.160137535C>A | ExAC,TOPMed,gnomAD |
rs746655063 | p.Gln521Lys | missense variant | - | NC_000002.12:g.160137533G>T | ExAC,gnomAD |
rs746655063 | p.Gln521Glu | missense variant | - | NC_000002.12:g.160137533G>C | ExAC,gnomAD |
rs775217432 | p.Cys522Gly | missense variant | - | NC_000002.12:g.160137530A>C | ExAC,TOPMed,gnomAD |
rs745321994 | p.Ile523Met | missense variant | - | NC_000002.12:g.160137525G>C | ExAC,gnomAD |
COSM71215 | p.Ile523Val | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160137527T>C | NCI-TCGA Cosmic |
rs1280767330 | p.Cys524Arg | missense variant | - | NC_000002.12:g.160137524A>G | gnomAD |
rs184765465 | p.Leu526Trp | missense variant | - | NC_000002.12:g.160137517A>C | 1000Genomes,ExAC,TOPMed,gnomAD |
rs184765465 | p.Leu526Ser | missense variant | - | NC_000002.12:g.160137517A>G | 1000Genomes,ExAC,TOPMed,gnomAD |
rs749662298 | p.Tyr529Cys | missense variant | - | NC_000002.12:g.160137508T>C | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Ile532Met | missense variant | - | NC_000002.12:g.160137498A>C | NCI-TCGA |
rs376026402 | p.Ile532Thr | missense variant | - | NC_000002.12:g.160137499A>G | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1373720934 | p.Gly534Glu | missense variant | - | NC_000002.12:g.160137493C>T | TOPMed,gnomAD |
rs1242129602 | p.Gly534Arg | missense variant | - | NC_000002.12:g.160137494C>T | gnomAD |
rs979172663 | p.Pro535Leu | missense variant | - | NC_000002.12:g.160137490G>A | gnomAD |
NCI-TCGA novel | p.Tyr536His | missense variant | - | NC_000002.12:g.160137488A>G | NCI-TCGA |
rs1383537674 | p.Gln538His | missense variant | - | NC_000002.12:g.160137480C>A | gnomAD |
rs756353631 | p.Gln538Arg | missense variant | - | NC_000002.12:g.160137481T>C | ExAC,TOPMed,gnomAD |
rs781330759 | p.Cys539Arg | missense variant | - | NC_000002.12:g.160137479A>G | ExAC,gnomAD |
rs781330759 | p.Cys539Ser | missense variant | - | NC_000002.12:g.160137479A>T | ExAC,gnomAD |
rs755084704 | p.Asp540Glu | missense variant | - | NC_000002.12:g.160137474G>T | ExAC,TOPMed,gnomAD |
rs1418523966 | p.Asn541Asp | missense variant | - | NC_000002.12:g.160137473T>C | gnomAD |
rs1418523966 | p.Asn541His | missense variant | - | NC_000002.12:g.160137473T>G | gnomAD |
rs1459564158 | p.Phe542Ser | missense variant | - | NC_000002.12:g.160137469A>G | TOPMed |
rs765140343 | p.Ser543Tyr | missense variant | - | NC_000002.12:g.160137466G>T | ExAC,TOPMed,gnomAD |
rs144967638 | p.Val545Met | missense variant | - | NC_000002.12:g.160137461C>T | ESP,ExAC,TOPMed,gnomAD |
rs763955136 | p.Val545Gly | missense variant | - | NC_000002.12:g.160137460A>C | ExAC,gnomAD |
rs760491071 | p.His547Asn | missense variant | - | NC_000002.12:g.160137455G>T | ExAC,gnomAD |
rs1319454224 | p.His547Gln | missense variant | - | NC_000002.12:g.160137453G>T | TOPMed,gnomAD |
rs1313996466 | p.Lys548Glu | missense variant | - | NC_000002.12:g.160137452T>C | TOPMed |
rs1239402477 | p.Gly549Arg | missense variant | - | NC_000002.12:g.160137449C>T | TOPMed,gnomAD |
rs775305706 | p.Leu550Arg | missense variant | - | NC_000002.12:g.160137445A>C | ExAC,gnomAD |
rs144680666 | p.Leu551Phe | missense variant | - | NC_000002.12:g.160137443G>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs139038668 | p.Cys552Ter | stop gained | - | NC_000002.12:g.160137438G>T | ESP,ExAC,TOPMed,gnomAD |
rs139038668 | p.Cys552Trp | missense variant | - | NC_000002.12:g.160137438G>C | ESP,ExAC,TOPMed,gnomAD |
rs188076755 | p.Gly553Arg | missense variant | - | NC_000002.12:g.160137437C>T | 1000Genomes,ExAC,TOPMed,gnomAD |
rs188076755 | p.Gly553Ter | stop gained | - | NC_000002.12:g.160137437C>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1226374205 | p.Gly554Ser | missense variant | - | NC_000002.12:g.160137434C>T | gnomAD |
rs546972685 | p.Gly554Asp | missense variant | - | NC_000002.12:g.160126601C>T | 1000Genomes,TOPMed,gnomAD |
rs748564787 | p.Gly556Cys | missense variant | - | NC_000002.12:g.160126596C>A | ExAC,TOPMed,gnomAD |
rs748564787 | p.Gly556Ser | missense variant | - | NC_000002.12:g.160126596C>T | ExAC,TOPMed,gnomAD |
rs143914557 | p.Asp557Asn | missense variant | - | NC_000002.12:g.160126593C>T | ESP,ExAC,TOPMed,gnomAD |
rs143914557 | p.Asp557Tyr | missense variant | - | NC_000002.12:g.160126593C>A | ESP,ExAC,TOPMed,gnomAD |
rs1201520091 | p.Cys558Gly | missense variant | - | NC_000002.12:g.160126590A>C | TOPMed |
rs1477208637 | p.Gly561Ala | missense variant | - | NC_000002.12:g.160126580C>G | TOPMed |
rs1253352527 | p.Cys563Phe | missense variant | - | NC_000002.12:g.160126574C>A | gnomAD |
rs1197756453 | p.Val564Glu | missense variant | - | NC_000002.12:g.160126571A>T | TOPMed,gnomAD |
rs780082370 | p.Cys565Arg | missense variant | - | NC_000002.12:g.160126569A>G | ExAC,gnomAD |
rs758528594 | p.Cys565Tyr | missense variant | - | NC_000002.12:g.160126568C>T | ExAC,gnomAD |
rs745898382 | p.Arg566Ser | missense variant | - | NC_000002.12:g.160126564C>A | ExAC,gnomAD |
rs1385559013 | p.Ser567Asn | missense variant | - | NC_000002.12:g.160126562C>T | TOPMed,gnomAD |
rs756097127 | p.Ser567Arg | missense variant | - | NC_000002.12:g.160126561G>T | ExAC,gnomAD |
rs777895050 | p.Ser567Cys | missense variant | - | NC_000002.12:g.160126563T>A | ExAC,gnomAD |
rs752597141 | p.Gly568Ser | missense variant | - | NC_000002.12:g.160126560C>T | ExAC,gnomAD |
rs1446463021 | p.Trp569Arg | missense variant | - | NC_000002.12:g.160126557A>G | gnomAD |
rs767415409 | p.Thr570Ala | missense variant | - | NC_000002.12:g.160126554T>C | ExAC,TOPMed,gnomAD |
rs754659009 | p.Gly571Asp | missense variant | - | NC_000002.12:g.160126550C>T | ExAC,gnomAD |
rs144758639 | p.Glu572Lys | missense variant | - | NC_000002.12:g.160126548C>T | ESP,ExAC,gnomAD |
rs1173904734 | p.Tyr573Ter | stop gained | - | NC_000002.12:g.160126543G>C | gnomAD |
rs888701114 | p.Cys574Ter | stop gained | - | NC_000002.12:g.160126540G>T | TOPMed |
rs772576883 | p.Cys574Arg | missense variant | - | NC_000002.12:g.160126542A>G | ExAC,gnomAD |
rs1395579738 | p.Asn575Lys | missense variant | - | NC_000002.12:g.160126537G>T | gnomAD |
COSM3837150 | p.Cys576Phe | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160126535C>A | NCI-TCGA Cosmic |
rs762307594 | p.Thr577Asn | missense variant | - | NC_000002.12:g.160126532G>T | ExAC,gnomAD |
rs777059897 | p.Thr578Asn | missense variant | - | NC_000002.12:g.160126529G>T | ExAC,gnomAD |
rs1398209178 | p.Ser579Gly | missense variant | - | NC_000002.12:g.160126527T>C | TOPMed |
rs769022285 | p.Thr580Lys | missense variant | - | NC_000002.12:g.160126523G>T | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Asp581Asn | missense variant | - | NC_000002.12:g.160126521C>T | NCI-TCGA |
NCI-TCGA novel | p.Ser582Cys | missense variant | - | NC_000002.12:g.160126517G>C | NCI-TCGA |
rs772152565 | p.Cys583Trp | missense variant | - | NC_000002.12:g.160126513G>C | ExAC,TOPMed,gnomAD |
rs770284828 | p.Val584Ile | missense variant | - | NC_000002.12:g.160126512C>T | ExAC,TOPMed,gnomAD |
rs756187131 | p.Ser585Phe | missense variant | - | NC_000002.12:g.160126508G>A | ExAC,gnomAD |
COSM1008244 | p.Ser585Pro | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160126509A>G | NCI-TCGA Cosmic |
COSM6154604 | p.Glu586Lys | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160126506C>T | NCI-TCGA Cosmic |
rs1292368259 | p.Val589Met | missense variant | - | NC_000002.12:g.160126497C>T | TOPMed |
rs1487949347 | p.Cys591Tyr | missense variant | - | NC_000002.12:g.160126490C>T | TOPMed |
rs781213934 | p.Cys591Gly | missense variant | - | NC_000002.12:g.160126491A>C | ExAC |
rs751270189 | p.Ser592Arg | missense variant | - | NC_000002.12:g.160126486G>T | ExAC,gnomAD |
rs200492977 | p.Gly593Arg | missense variant | - | NC_000002.12:g.160126485C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs757977525 | p.Arg594His | missense variant | - | NC_000002.12:g.160126481C>T | ExAC,TOPMed,gnomAD |
rs1433404920 | p.Arg594Cys | missense variant | - | NC_000002.12:g.160126482G>A | TOPMed,gnomAD |
rs764735670 | p.Gly595Arg | missense variant | - | NC_000002.12:g.160126479C>T | ExAC,gnomAD |
rs1376058943 | p.Asp596Tyr | missense variant | - | NC_000002.12:g.160126476C>A | gnomAD |
rs1437600372 | p.Cys597Arg | missense variant | - | NC_000002.12:g.160126473A>G | gnomAD |
rs777145845 | p.Gly600Asp | missense variant | - | NC_000002.12:g.160126463C>T | ExAC,gnomAD |
rs764546149 | p.Cys602Ser | missense variant | - | NC_000002.12:g.160126458A>T | ExAC,gnomAD |
rs761142877 | p.Cys604Gly | missense variant | - | NC_000002.12:g.160126452A>C | ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Cys604Tyr | missense variant | - | NC_000002.12:g.160126451C>T | NCI-TCGA |
rs1212478399 | p.Thr605Pro | missense variant | - | NC_000002.12:g.160126449T>G | gnomAD |
rs543986673 | p.Thr605Ile | missense variant | - | NC_000002.12:g.160126448G>A | 1000Genomes,gnomAD |
COSM5139725 | p.Pro607LeuPheSerTerUnkUnk | frameshift | Variant assessed as Somatic; HIGH impact. | NC_000002.12:g.160126442G>- | NCI-TCGA Cosmic |
rs775693403 | p.Thr613Pro | missense variant | - | NC_000002.12:g.160126425T>G | ExAC,TOPMed,gnomAD |
rs775693403 | p.Thr613Ala | missense variant | - | NC_000002.12:g.160126425T>C | ExAC,TOPMed,gnomAD |
rs730880297 | p.Arg616Ter | stop gained | - | NC_000002.12:g.160126416G>A | ExAC,TOPMed,gnomAD |
rs144493660 | p.Arg616Pro | missense variant | - | NC_000002.12:g.160126415C>G | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
RCV000157640 | p.Arg616Ter | nonsense | Amelogenesis imperfecta, type IH (AI1H) | NC_000002.12:g.160126416G>A | ClinVar |
rs771143977 | p.Cys617Phe | missense variant | - | NC_000002.12:g.160126412C>A | ExAC,gnomAD |
rs1188139931 | p.Cys617Gly | missense variant | - | NC_000002.12:g.160126413A>C | TOPMed,gnomAD |
NCI-TCGA novel | p.Cys617Ter | stop gained | - | NC_000002.12:g.160126411A>T | NCI-TCGA |
rs749328795 | p.Thr619Ile | missense variant | - | NC_000002.12:g.160126406G>A | ExAC,TOPMed,gnomAD |
rs1385780826 | p.Thr619Ala | missense variant | - | NC_000002.12:g.160126407T>C | TOPMed |
rs1310842796 | p.Asp622Asn | missense variant | - | NC_000002.12:g.160126398C>T | TOPMed |
NCI-TCGA novel | p.Asp622Tyr | missense variant | - | NC_000002.12:g.160126398C>A | NCI-TCGA |
rs768444834 | p.Pro623His | missense variant | - | NC_000002.12:g.160126394G>T | ExAC,gnomAD |
rs746882289 | p.Cys624Ter | stop gained | - | NC_000002.12:g.160126390A>T | ExAC,gnomAD |
rs1261784033 | p.Arg628Gln | missense variant | - | NC_000002.12:g.160126379C>T | TOPMed,gnomAD |
rs202195621 | p.Arg628Gly | missense variant | - | NC_000002.12:g.160126380G>C | ExAC,TOPMed,gnomAD |
rs202195621 | p.Arg628Trp | missense variant | - | NC_000002.12:g.160126380G>A | ExAC,TOPMed,gnomAD |
rs1261784033 | p.Arg628Pro | missense variant | - | NC_000002.12:g.160126379C>G | TOPMed,gnomAD |
rs574352340 | p.Ser629Gly | missense variant | - | NC_000002.12:g.160123887T>C | 1000Genomes,ExAC,gnomAD |
rs997117450 | p.Ser629Asn | missense variant | - | NC_000002.12:g.160123886C>T | gnomAD |
rs370714170 | p.Ile631Thr | missense variant | - | NC_000002.12:g.160123880A>G | ESP,ExAC,TOPMed,gnomAD |
rs1321188375 | p.Glu632Val | missense variant | - | NC_000002.12:g.160123877T>A | gnomAD |
rs150163379 | p.His634Arg | missense variant | - | NC_000002.12:g.160123871T>C | ESP,ExAC,TOPMed,gnomAD |
rs142919023 | p.His634Tyr | missense variant | - | NC_000002.12:g.160123872G>A | ESP,ExAC,gnomAD |
rs771235788 | p.Leu635Pro | missense variant | - | NC_000002.12:g.160123868A>G | ExAC,gnomAD |
rs376329044 | p.Ala637Val | missense variant | - | NC_000002.12:g.160123862G>A | ESP,ExAC,TOPMed,gnomAD |
rs552791527 | p.Gly639Asp | missense variant | - | NC_000002.12:g.160123856C>T | 1000Genomes |
rs773414491 | p.Gly639Ser | missense variant | - | NC_000002.12:g.160123857C>T | ExAC,gnomAD |
NCI-TCGA novel | p.Gln640Glu | missense variant | - | NC_000002.12:g.160123854G>C | NCI-TCGA |
rs61737767 | p.Arg642Ter | stop gained | - | NC_000002.12:g.160123848G>A | ExAC,TOPMed,gnomAD |
rs200145370 | p.Arg642Gln | missense variant | - | NC_000002.12:g.160123847C>T | ExAC,TOPMed,gnomAD |
COSM282009 | p.Glu644Ter | stop gained | Variant assessed as Somatic; HIGH impact. | NC_000002.12:g.160123842C>A | NCI-TCGA Cosmic |
rs745623919 | p.Cys645Arg | missense variant | - | NC_000002.12:g.160123839A>G | ExAC,gnomAD |
rs1441324615 | p.Cys645Tyr | missense variant | - | NC_000002.12:g.160123838C>T | gnomAD |
rs778578823 | p.Val646Met | missense variant | - | NC_000002.12:g.160123836C>T | ExAC,gnomAD |
rs920657730 | p.Asp647Gly | missense variant | - | NC_000002.12:g.160123832T>C | TOPMed,gnomAD |
rs775754627 | p.Lys648Asn | missense variant | - | NC_000002.12:g.160123828C>A | ExAC,TOPMed,gnomAD |
rs1411158973 | p.Lys648Gln | missense variant | - | NC_000002.12:g.160123830T>G | TOPMed,gnomAD |
NCI-TCGA novel | p.Cys649Tyr | missense variant | - | NC_000002.12:g.160123826C>T | NCI-TCGA |
rs753402565 | p.Leu651Pro | missense variant | - | NC_000002.12:g.160123820A>G | ExAC,gnomAD |
rs887228629 | p.Ala652Val | missense variant | - | NC_000002.12:g.160123817G>A | gnomAD |
rs150971153 | p.Ala654Val | missense variant | - | NC_000002.12:g.160123811G>A | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs150971153 | p.Ala654Gly | missense variant | - | NC_000002.12:g.160123811G>C | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs768015188 | p.Thr655Asn | missense variant | - | NC_000002.12:g.160123808G>T | ExAC,TOPMed,gnomAD |
rs1469181840 | p.Thr655Ala | missense variant | - | NC_000002.12:g.160123809T>C | gnomAD |
rs755421198 | p.Ser657Ile | missense variant | - | NC_000002.12:g.160123802C>A | ExAC,TOPMed,gnomAD |
rs751938984 | p.Glu659Lys | missense variant | - | NC_000002.12:g.160123797C>T | ExAC,TOPMed,gnomAD |
rs1199919769 | p.Glu660Lys | missense variant | - | NC_000002.12:g.160123794C>T | gnomAD |
rs1295424870 | p.Asp661Val | missense variant | - | NC_000002.12:g.160112199T>A | TOPMed |
rs1315401429 | p.Phe662Ser | missense variant | - | NC_000002.12:g.160112196A>G | gnomAD |
NCI-TCGA novel | p.Lys664Asn | missense variant | - | NC_000002.12:g.160112189C>A | NCI-TCGA |
rs1435834258 | p.Asp665Gly | missense variant | - | NC_000002.12:g.160112187T>C | gnomAD |
rs750633028 | p.Gly666Asp | missense variant | - | NC_000002.12:g.160112184C>T | ExAC,gnomAD |
rs750633028 | p.Gly666Val | missense variant | - | NC_000002.12:g.160112184C>A | ExAC,gnomAD |
rs376470109 | p.Val668Ile | missense variant | - | NC_000002.12:g.160112179C>T | ESP,ExAC,TOPMed,gnomAD |
rs761842374 | p.Ser669Pro | missense variant | - | NC_000002.12:g.160112176A>G | ExAC,TOPMed,gnomAD |
rs761842374 | p.Ser669Thr | missense variant | - | NC_000002.12:g.160112176A>T | ExAC,TOPMed,gnomAD |
rs776752490 | p.Cys670Ter | stop gained | - | NC_000002.12:g.160112171G>T | ExAC,gnomAD |
rs1474284689 | p.Ser671Phe | missense variant | - | NC_000002.12:g.160112169G>A | gnomAD |
rs1481294410 | p.Leu672Pro | missense variant | - | NC_000002.12:g.160112166A>G | gnomAD |
NCI-TCGA novel | p.Leu672Val | missense variant | - | NC_000002.12:g.160112167G>C | NCI-TCGA |
rs1188718105 | p.Gln673Lys | missense variant | - | NC_000002.12:g.160112164G>T | gnomAD |
rs200660753 | p.Gly674Arg | missense variant | - | NC_000002.12:g.160112161C>T | ExAC,TOPMed,gnomAD |
rs964592128 | p.Gly674Glu | missense variant | - | NC_000002.12:g.160112160C>T | TOPMed,gnomAD |
COSM1008242 | p.Glu677Ter | stop gained | Variant assessed as Somatic; HIGH impact. | NC_000002.12:g.160112152C>A | NCI-TCGA Cosmic |
rs1217745574 | p.Cys678Arg | missense variant | - | NC_000002.12:g.160112149A>G | gnomAD |
rs774204391 | p.Leu679Val | missense variant | - | NC_000002.12:g.160112146G>C | ExAC,gnomAD |
rs1191570106 | p.Phe682Leu | missense variant | - | NC_000002.12:g.160112135G>T | TOPMed |
rs749058952 | p.Leu683Pro | missense variant | - | NC_000002.12:g.160112133A>G | ExAC,gnomAD |
rs772770914 | p.Thr685Ile | missense variant | - | NC_000002.12:g.160112127G>A | ExAC,gnomAD |
rs1398818207 | p.Thr686Lys | missense variant | - | NC_000002.12:g.160112124G>T | gnomAD |
rs747659835 | p.Asp687Tyr | missense variant | - | NC_000002.12:g.160112122C>A | ExAC,gnomAD |
rs1260897929 | p.Asn688Ser | missense variant | - | NC_000002.12:g.160112118T>C | TOPMed |
rs1190490436 | p.Glu689Gln | missense variant | - | NC_000002.12:g.160112116C>G | TOPMed |
rs1164506403 | p.Glu689Asp | missense variant | - | NC_000002.12:g.160112114C>A | gnomAD |
rs754473547 | p.Gly690Glu | missense variant | - | NC_000002.12:g.160112112C>T | ExAC,TOPMed,gnomAD |
rs1460115362 | p.Gly690Arg | missense variant | - | NC_000002.12:g.160112113C>T | gnomAD |
rs1165829377 | p.Lys691Glu | missense variant | - | NC_000002.12:g.160112110T>C | gnomAD |
COSM1564737 | p.Lys691Asn | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160112108T>A | NCI-TCGA Cosmic |
rs1427977643 | p.Ile693Val | missense variant | - | NC_000002.12:g.160112104T>C | gnomAD |
rs139804091 | p.Ile694Phe | missense variant | - | NC_000002.12:g.160112101T>A | ESP,ExAC,TOPMed,gnomAD |
rs139804091 | p.Ile694Leu | missense variant | - | NC_000002.12:g.160112101T>G | ESP,ExAC,TOPMed,gnomAD |
rs139804091 | p.Ile694Val | missense variant | - | NC_000002.12:g.160112101T>C | ESP,ExAC,TOPMed,gnomAD |
rs1252096609 | p.Ser696Arg | missense variant | - | NC_000002.12:g.160112095T>G | gnomAD |
rs1233486573 | p.Ile697Ser | missense variant | - | NC_000002.12:g.160112091A>C | gnomAD |
rs577005383 | p.Asn698Ile | missense variant | - | NC_000002.12:g.160112088T>A | 1000Genomes,ExAC,TOPMed,gnomAD |
rs779056066 | p.Asn698Asp | missense variant | - | NC_000002.12:g.160112089T>C | ExAC |
rs577005383 | p.Asn698Ser | missense variant | - | NC_000002.12:g.160112088T>C | 1000Genomes,ExAC,TOPMed,gnomAD |
rs764161553 | p.Glu699Gly | missense variant | - | NC_000002.12:g.160112085T>C | ExAC,gnomAD |
rs1360357955 | p.Glu699Asp | missense variant | - | NC_000002.12:g.160112084T>G | TOPMed |
rs753934656 | p.Glu699Ter | stop gained | - | NC_000002.12:g.160112086C>A | ExAC,gnomAD |
rs895658072 | p.Lys700Glu | missense variant | - | NC_000002.12:g.160112083T>C | TOPMed,gnomAD |
NCI-TCGA novel | p.Cys702Phe | missense variant | - | NC_000002.12:g.160107842C>A | NCI-TCGA |
rs369122182 | p.Pro703Arg | missense variant | - | NC_000002.12:g.160107839G>C | ESP,ExAC,TOPMed,gnomAD |
rs369122182 | p.Pro703Leu | missense variant | - | NC_000002.12:g.160107839G>A | ESP,ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Pro703Ser | missense variant | - | NC_000002.12:g.160107840G>A | NCI-TCGA |
NCI-TCGA novel | p.Lys704Asn | missense variant | - | NC_000002.12:g.160107835C>G | NCI-TCGA |
rs777918545 | p.Pro705Thr | missense variant | - | NC_000002.12:g.160107834G>T | ExAC,gnomAD |
rs777918545 | p.Pro705Ala | missense variant | - | NC_000002.12:g.160107834G>C | ExAC,gnomAD |
rs756213093 | p.Pro706Ala | missense variant | - | NC_000002.12:g.160107831G>C | ExAC,gnomAD |
rs766351579 | p.Asn707Ile | missense variant | - | NC_000002.12:g.160107827T>A | ExAC,TOPMed,gnomAD |
rs377135299 | p.Asn707Asp | missense variant | - | NC_000002.12:g.160107828T>C | ESP,ExAC,gnomAD |
rs1416979649 | p.Met710Arg | missense variant | - | NC_000002.12:g.160107818A>C | TOPMed,gnomAD |
rs1416979649 | p.Met710Thr | missense variant | - | NC_000002.12:g.160107818A>G | TOPMed,gnomAD |
rs1159479045 | p.Met710Val | missense variant | - | NC_000002.12:g.160107819T>C | TOPMed |
rs372646338 | p.Ile711Val | missense variant | - | NC_000002.12:g.160107816T>C | ESP,ExAC,gnomAD |
rs750251062 | p.Ile711Thr | missense variant | - | NC_000002.12:g.160107815A>G | ExAC,gnomAD |
rs367865998 | p.Met712Thr | missense variant | - | NC_000002.12:g.160107812A>G | ESP,ExAC,TOPMed,gnomAD |
rs1280244580 | p.Leu713Val | missense variant | - | NC_000002.12:g.160107810A>C | gnomAD |
rs757207082 | p.Gly714Arg | missense variant | - | NC_000002.12:g.160107807C>T | ExAC,gnomAD |
rs776455815 | p.Val715Ile | missense variant | - | NC_000002.12:g.160107804C>T | ExAC |
rs573911717 | p.Val715Asp | missense variant | - | NC_000002.12:g.160107803A>T | 1000Genomes,ExAC,gnomAD |
rs573911717 | p.Val715Gly | missense variant | - | NC_000002.12:g.160107803A>C | 1000Genomes,ExAC,gnomAD |
rs775131133 | p.Ser716Phe | missense variant | - | NC_000002.12:g.160107800G>A | ExAC,gnomAD |
rs979599332 | p.Ala718Pro | missense variant | - | NC_000002.12:g.160107795C>G | TOPMed |
rs979599332 | p.Ala718Thr | missense variant | - | NC_000002.12:g.160107795C>T | TOPMed |
rs1374016397 | p.Ile719Val | missense variant | - | NC_000002.12:g.160107792T>C | TOPMed |
rs1238745539 | p.Leu721Pro | missense variant | - | NC_000002.12:g.160107785A>G | gnomAD |
rs966484703 | p.Gly723Arg | missense variant | - | NC_000002.12:g.160107780C>G | TOPMed,gnomAD |
COSM1008240 | p.Gly723Arg | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160107780C>T | NCI-TCGA Cosmic |
rs146397669 | p.Val724Phe | missense variant | - | NC_000002.12:g.160107777C>A | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs146397669 | p.Val724Leu | missense variant | - | NC_000002.12:g.160107777C>G | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
rs146397669 | p.Val724Ile | missense variant | - | NC_000002.12:g.160107777C>T | 1000Genomes,ESP,ExAC,TOPMed,gnomAD |
NCI-TCGA novel | p.Val725Ile | missense variant | - | NC_000002.12:g.160107774C>T | NCI-TCGA |
rs749610054 | p.Leu727Arg | missense variant | - | NC_000002.12:g.160107767A>C | ExAC,TOPMed,gnomAD |
COSM1008238 | p.Ile729Ser | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160107761A>C | NCI-TCGA Cosmic |
rs778009963 | p.Trp730Cys | missense variant | - | NC_000002.12:g.160107757C>A | ExAC,TOPMed,gnomAD |
rs1256164920 | p.Leu732Val | missense variant | - | NC_000002.12:g.160107753G>C | TOPMed |
rs374327754 | p.Val734Met | missense variant | - | NC_000002.12:g.160107747C>T | ESP,ExAC,TOPMed,gnomAD |
rs781242094 | p.Ser735Pro | missense variant | - | NC_000002.12:g.160107744A>G | ExAC,TOPMed,gnomAD |
rs754956643 | p.His737Arg | missense variant | - | NC_000002.12:g.160107737T>C | ExAC,gnomAD |
rs1189425088 | p.Asp738Tyr | missense variant | - | NC_000002.12:g.160107735C>A | gnomAD |
rs1486964947 | p.Asp738Gly | missense variant | - | NC_000002.12:g.160107734T>C | gnomAD |
rs757115141 | p.Arg739Leu | missense variant | - | NC_000002.12:g.160107731C>A | ExAC,gnomAD |
rs757115141 | p.Arg739Pro | missense variant | - | NC_000002.12:g.160107731C>G | ExAC,gnomAD |
rs757115141 | p.Arg739His | missense variant | - | NC_000002.12:g.160107731C>T | ExAC,gnomAD |
rs750398020 | p.Arg739Cys | missense variant | - | NC_000002.12:g.160107732G>A | ExAC,TOPMed,gnomAD |
rs750398020 | p.Arg739Gly | missense variant | - | NC_000002.12:g.160107732G>C | ExAC,TOPMed,gnomAD |
rs753667027 | p.Glu741Val | missense variant | - | NC_000002.12:g.160107725T>A | ExAC,gnomAD |
rs760403120 | p.Lys744Asn | missense variant | - | NC_000002.12:g.160107715T>A | ExAC,gnomAD |
rs1416692961 | p.Glu746Asp | missense variant | - | NC_000002.12:g.160107709T>G | TOPMed,gnomAD |
COSM6154605 | p.Glu748Gln | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160107705C>G | NCI-TCGA Cosmic |
rs199651918 | p.Arg749Ter | stop gained | - | NC_000002.12:g.160107702G>A | ExAC,gnomAD |
rs540109604 | p.Arg749Gln | missense variant | - | NC_000002.12:g.160107701C>T | 1000Genomes,ExAC,TOPMed,gnomAD |
rs771306762 | p.Ser750Thr | missense variant | - | NC_000002.12:g.160107699A>T | ExAC,gnomAD |
rs773552663 | p.Trp754Arg | missense variant | - | NC_000002.12:g.160107687A>T | ExAC,gnomAD |
rs150867142 | p.Thr756Met | missense variant | - | NC_000002.12:g.160107680G>A | ESP,ExAC,TOPMed,gnomAD |
rs150867142 | p.Thr756Lys | missense variant | - | NC_000002.12:g.160107680G>T | ESP,ExAC,TOPMed,gnomAD |
rs747175115 | p.Gly757Arg | missense variant | - | NC_000002.12:g.160101834C>T | ExAC,gnomAD |
rs772215000 | p.Pro760Ser | missense variant | - | NC_000002.12:g.160101825G>A | ExAC,gnomAD |
rs772215000 | p.Pro760Thr | missense variant | - | NC_000002.12:g.160101825G>T | ExAC,gnomAD |
rs777800965 | p.Tyr762Cys | missense variant | - | NC_000002.12:g.160101818T>C | ExAC,gnomAD |
rs1320721685 | p.Tyr762His | missense variant | - | NC_000002.12:g.160101819A>G | TOPMed |
rs756002087 | p.Gly764Ala | missense variant | - | NC_000002.12:g.160101812C>G | ExAC,gnomAD |
NCI-TCGA novel | p.Ser765Phe | missense variant | - | NC_000002.12:g.160101809G>A | NCI-TCGA |
rs754573154 | p.Thr766Ile | missense variant | - | NC_000002.12:g.160101806G>A | ExAC,gnomAD |
rs1274695997 | p.Thr766Ala | missense variant | - | NC_000002.12:g.160101807T>C | TOPMed |
rs751147195 | p.Thr768Ile | missense variant | - | NC_000002.12:g.160101800G>A | ExAC,TOPMed,gnomAD |
rs1434516613 | p.Lys770Gln | missense variant | - | NC_000002.12:g.160101795T>G | gnomAD |
NCI-TCGA novel | p.Lys770Asn | missense variant | - | NC_000002.12:g.160101793T>G | NCI-TCGA |
rs765876600 | p.Thr773Asn | missense variant | - | NC_000002.12:g.160101785G>T | ExAC,gnomAD |
rs762389754 | p.Tyr774Cys | missense variant | - | NC_000002.12:g.160101782T>C | ExAC,gnomAD |
rs201494177 | p.Lys775Ter | stop gained | - | NC_000002.12:g.160101780T>A | ESP,ExAC,gnomAD |
rs765704356 | p.Lys775Asn | missense variant | - | NC_000002.12:g.160101778T>A | ExAC,gnomAD |
rs540706226 | p.His776Pro | missense variant | - | NC_000002.12:g.160101776T>G | 1000Genomes,ExAC,TOPMed,gnomAD |
rs540706226 | p.His776Arg | missense variant | - | NC_000002.12:g.160101776T>C | 1000Genomes,ExAC,TOPMed,gnomAD |
rs1275269809 | p.Arg777Ser | missense variant | - | NC_000002.12:g.160101772C>G | gnomAD |
COSM3568364 | p.Arg777Lys | missense variant | Variant assessed as Somatic; MODERATE impact. | NC_000002.12:g.160101773C>T | NCI-TCGA Cosmic |
rs1210024151 | p.Gln780Arg | missense variant | - | NC_000002.12:g.160101764T>C | gnomAD |
NCI-TCGA novel | p.Gln780Ter | stop gained | - | NC_000002.12:g.160101766_160101767insATGTTCCTACTGGTTTCAC | NCI-TCGA |
rs760815776 | p.Val782Ile | missense variant | - | NC_000002.12:g.160101759C>T | ExAC,gnomAD |
rs775725788 | p.Asp783Asn | missense variant | - | NC_000002.12:g.160101756C>T | ExAC,gnomAD |
rs1349576201 | p.Asp783Glu | missense variant | - | NC_000002.12:g.160101754G>T | gnomAD |
rs1277349276 | p.Leu784Ile | missense variant | - | NC_000002.12:g.160101753G>T | gnomAD |
rs1350520068 | p.Ser785Pro | missense variant | - | NC_000002.12:g.160101750A>G | gnomAD |
rs1246721689 | p.Asp787Gly | missense variant | - | NC_000002.12:g.160101743T>C | TOPMed |
rs745899695 | p.Cys788Trp | missense variant | - | NC_000002.12:g.160101739G>C | ExAC,TOPMed,gnomAD |
Disease ID | Disease Name | Disease Type | Source |
---|---|---|---|
C0000768 | Congenital Abnormality | group | BEFREE |
C0000786 | Spontaneous abortion | phenotype | CTD_human |
C0000822 | Abortion, Tubal | disease | CTD_human |
C0002170 | Alopecia | disease | HPO |
C0002452 | Amelogenesis Imperfecta | disease | BEFREE;GENOMICS_ENGLAND;HPO |
C0004096 | Asthma | disease | MGD |
C0004364 | Autoimmune Diseases | group | CTD_human |
C0006142 | Malignant neoplasm of breast | disease | BEFREE |
C0007102 | Malignant tumor of colon | disease | BEFREE |
C0007137 | Squamous cell carcinoma | disease | BEFREE;LHGDN |
C0008311 | Cholangitis | disease | CTD_human |
C0009375 | Colonic Neoplasms | group | BEFREE;LHGDN |
C0011053 | Deafness | phenotype | HPO |
C0011351 | Dental Enamel Hypoplasia | disease | HPO |
C0014544 | Epilepsy | disease | HPO |
C0017638 | Glioma | disease | BEFREE |
C0018772 | Hearing Loss, Partial | phenotype | HPO |
C0020757 | Ichthyoses | disease | HPO |
C0023893 | Liver Cirrhosis, Experimental | disease | CTD_human |
C0023895 | Liver diseases | group | CTD_human |
C0025362 | Mental Retardation | disease | HPO |
C0026827 | Muscle hypotonia | phenotype | HPO |
C0027627 | Neoplasm Metastasis | phenotype | BEFREE |
C0029607 | Other emphysema | disease | MGD |
C0034063 | Pulmonary Edema | disease | BEFREE |
C0034067 | Pulmonary Emphysema | disease | BEFREE;CTD_human |
C0034069 | Pulmonary Fibrosis | disease | BEFREE |
C0036572 | Seizures | phenotype | HPO |
C0085636 | Photophobia | phenotype | HPO |
C0086565 | Liver Dysfunction | phenotype | CTD_human |
C0151611 | Electroencephalogram abnormal | phenotype | HPO |
C0221227 | Centriacinar Emphysema | disease | CTD_human |
C0221357 | Brachydactyly | disease | HPO |
C0221373 | Claw hand | disease | HPO |
C0235974 | Pancreatic carcinoma | disease | BEFREE |
C0242379 | Malignant neoplasm of lung | disease | BEFREE |
C0264393 | Panacinar Emphysema | disease | CTD_human |
C0339789 | Congenital deafness | disease | HPO |
C0349588 | Short stature | phenotype | HPO |
C0399367 | Amelogenesis imperfecta local hypoplastic form | disease | ORPHANET |
C0399376 | Amelogenesis Imperfecta, Type III | disease | ORPHANET |
C0423903 | Low intelligence | phenotype | HPO |
C0424688 | Small head | phenotype | HPO |
C0455829 | Waist Circumference | phenotype | GWASCAT |
C0524910 | Hepatitis C, Chronic | disease | CTD_human |
C0541764 | Delayed bone age | phenotype | HPO |
C0578022 | Finding of body mass index | phenotype | GWASCAT |
C0596263 | Carcinogenesis | phenotype | BEFREE |
C0678222 | Breast Carcinoma | disease | BEFREE |
C0684249 | Carcinoma of lung | disease | BEFREE |
C0699790 | Colon Carcinoma | disease | BEFREE |
C0746102 | Chronic lung disease | group | BEFREE |
C0796085 | Nance-Horan syndrome | disease | BEFREE |
C0917816 | Mental deficiency | disease | HPO |
C0948896 | Primary hypogonadism | disease | HPO |
C1305855 | Body mass index | phenotype | GWASCAT |
C1306460 | Primary malignant neoplasm of lung | disease | BEFREE |
C1335302 | Pancreatic Ductal Adenocarcinoma | disease | BEFREE |
C1384666 | hearing impairment | phenotype | HPO |
C1843367 | Poor school performance | phenotype | HPO |
C1848765 | Sparse/absent eyebrows | phenotype | HPO |
C1851854 | Thin dental enamel | phenotype | HPO |
C1857042 | Sparse scalp hair | phenotype | HPO |
C1860711 | Dental enamel pits | phenotype | HPO |
C1862863 | Sparse body hair | phenotype | HPO |
C1863008 | Yellow-brown discoloration of the teeth | phenotype | HPO |
C2266639 | Absence of eyebrow | phenotype | HPO |
C2350878 | Focal Emphysema | disease | CTD_human |
C2931280 | Perniola Krajewska Carnevale syndrome | disease | ORPHANET |
C3551430 | Sparse or absent eyebrows | phenotype | HPO |
C3714636 | Pneumonitis | disease | BEFREE |
C3714756 | Intellectual Disability | group | GENOMICS_ENGLAND;HPO |
C4015557 | AMELOGENESIS IMPERFECTA, TYPE IH | disease | CLINVAR;CTD_human;UNIPROT |
C4020876 | Dull intelligence | phenotype | HPO |
C4020887 | Photodysphoria | phenotype | HPO |
C4021902 | Short corpus callosum | phenotype | HPO |
C4021956 | Aplasia/Hypoplasia of the eyebrow | phenotype | HPO |
C4024598 | Anterior open-bite malocclusion | phenotype | HPO |
C4280456 | Dysplasia of tooth enamel | phenotype | HPO |
C4280457 | Defective enamel matrix | phenotype | HPO |
GO ID | GO Term | Evidence |
---|---|---|
GO:0001618 | virus receptor activity | IEA |
GO:0005178 | integrin binding | IBA |
GO:0005515 | protein binding | IPI |
GO:0038023 | signaling receptor activity | IEA |
GO ID | GO Term | Evidence |
---|---|---|
GO:0006954 | inflammatory response | IEA |
GO:0007155 | cell adhesion | TAS |
GO:0007160 | cell-matrix adhesion | IBA |
GO:0007229 | integrin-mediated signaling pathway | IBA |
GO:0016477 | cell migration | IBA |
GO:0030198 | extracellular matrix organization | TAS |
GO:0033627 | cell adhesion mediated by integrin | IDA |
GO:0033627 | cell adhesion mediated by integrin | IBA |
GO:0038044 | transforming growth factor-beta secretion | IEA |
GO:0046718 | viral entry into host cell | IEA |
GO:1901388 | regulation of transforming growth factor beta activation | IDA |
GO ID | GO Term | Evidence |
---|---|---|
GO:0005654 | nucleoplasm | IDA |
GO:0005813 | centrosome | IDA |
GO:0005886 | plasma membrane | TAS |
GO:0005925 | focal adhesion | IDA |
GO:0005925 | focal adhesion | IBA |
GO:0008305 | integrin complex | TAS |
GO:0009897 | external side of plasma membrane | IEA |
GO:0030054 | cell junction | IDA |
GO:0034685 | integrin alphav-beta6 complex | IBA |
GO:0034685 | integrin alphav-beta6 complex | IDA |
GO:0043235 | receptor complex | IDA |
Reactome ID | Reactome Term | Evidence |
---|---|---|
R-HSA-1474244 | Extracellular matrix organization | TAS |
R-HSA-1566948 | Elastic fibre formation | TAS |
R-HSA-2129379 | Molecules associated with elastic fibres | TAS |
R-HSA-216083 | Integrin cell surface interactions | TAS |
R-HSA-3000178 | ECM proteoglycans | TAS |
ID | Drug Name | Action | PubMed |
---|---|---|---|
D015655 | 1-Methyl-4-phenylpyridinium | 1-Methyl-4-phenylpyridinium results in decreased expression of ITGB6 mRNA | 28801915 |
D015058 | 1-Naphthylisothiocyanate | 1-Naphthylisothiocyanate results in increased expression of [ITGB6 protein co-treated with ITGA5 protein] | 21037076 |
D015058 | 1-Naphthylisothiocyanate | [1-Naphthylisothiocyanate results in increased expression of [ITGB6 protein co-treated with ITGA5 protein]] which results in increased activity of TGFB1 protein | 21037076 |
D015058 | 1-Naphthylisothiocyanate | F2R protein promotes the reaction [1-Naphthylisothiocyanate results in increased expression of [ITGB6 protein co-treated with ITGA5 protein]] | 21037076 |
D015058 | 1-Naphthylisothiocyanate | F3 protein promotes the reaction [1-Naphthylisothiocyanate results in increased expression of [ITGB6 protein co-treated with ITGA5 protein]] | 21037076 |
D015058 | 1-Naphthylisothiocyanate | 1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA | 21037076; 24633426; 26921287; 28049044; |
D015058 | 1-Naphthylisothiocyanate | 1-Naphthylisothiocyanate results in increased expression of ITGB6 protein | 22094456 |
D015058 | 1-Naphthylisothiocyanate | EGR1 protein affects the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 protein] | 22094456 |
D015058 | 1-Naphthylisothiocyanate | F2R protein promotes the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 21037076 |
D015058 | 1-Naphthylisothiocyanate | F3 protein promotes the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 21037076 |
D015058 | 1-Naphthylisothiocyanate | FGG protein affects the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 26921287 |
D015058 | 1-Naphthylisothiocyanate | FGG protein affects the reaction [leukadherin-1 inhibits the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA]] | 26921287 |
D015058 | 1-Naphthylisothiocyanate | IFNG protein affects the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 26921287 |
D015058 | 1-Naphthylisothiocyanate | [ITGA5 protein co-treated with ITGB6 protein] promotes the reaction [1-Naphthylisothiocyanate results in increased phosphorylation of SMAD2 protein] | 21037076 |
D015058 | 1-Naphthylisothiocyanate | leukadherin-1 inhibits the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 26921287 |
D015058 | 1-Naphthylisothiocyanate | RAG1 gene mutant form inhibits the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 28049044 |
D015058 | 1-Naphthylisothiocyanate | TGFB1 protein promotes the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 21037076 |
C111118 | 2',3,3',4',5-pentachloro-4-hydroxybiphenyl | 2',3,3',4',5-pentachloro-4-hydroxybiphenyl results in decreased expression of ITGB6 mRNA | 19114083 |
C090942 | 4-(4-fluorophenyl)-2-(4-hydroxyphenyl)-5-(4-pyridyl)imidazole | 4-(4-fluorophenyl)-2-(4-hydroxyphenyl)-5-(4-pyridyl)imidazole inhibits the reaction [TGFB1 protein results in increased expression of ITGB6 mRNA] | 21303922 |
C459179 | 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of ITGB6 mRNA | 27188386 |
C459179 | 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of ITGB6 mRNA | 27188386 |
C027576 | 4-hydroxy-2-nonenal | 4-hydroxy-2-nonenal results in decreased expression of ITGB6 mRNA | 12419474 |
D015127 | 9,10-Dimethyl-1,2-benzanthracene | 9,10-Dimethyl-1,2-benzanthracene results in increased expression of ITGB6 mRNA | 19480007 |
D016604 | Aflatoxin B1 | Aflatoxin B1 results in decreased methylation of ITGB6 gene | 27153756 |
D016604 | Aflatoxin B1 | Aflatoxin B1 results in increased expression of ITGB6 mRNA | 23630614 |
D000639 | Amitriptyline | Amitriptyline results in decreased expression of ITGB6 mRNA | 22341215 |
D001280 | Atrazine | Atrazine results in decreased expression of ITGB6 mRNA | 29505797 |
D001397 | Azoxymethane | [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in increased expression of ITGB6 mRNA | 29950665 |
D001564 | Benzo(a)pyrene | Benzo(a)pyrene results in decreased expression of ITGB6 mRNA | 22178795 |
D001564 | Benzo(a)pyrene | Benzo(a)pyrene results in decreased expression of ITGB6 mRNA | 21569818; 22228805; |
D001564 | Benzo(a)pyrene | Benzo(a)pyrene results in decreased expression of ITGB6 mRNA | 21839799 |
C022921 | benzo(k)fluoranthene | benzo(k)fluoranthene results in decreased expression of ITGB6 mRNA | 26377693 |
D019324 | beta-Naphthoflavone | [Diethylnitrosamine co-treated with beta-Naphthoflavone] results in increased expression of ITGB6 mRNA | 18164116 |
D000077610 | Bexarotene | Bexarotene results in increased expression of ITGB6 mRNA | 17178900 |
C543008 | bis(4-hydroxyphenyl)sulfone | bis(4-hydroxyphenyl)sulfone results in increased expression of ITGB6 mRNA | 30951980 |
C006780 | bisphenol A | bisphenol A results in increased expression of ITGB6 mRNA | 26063408 |
C006780 | bisphenol A | bisphenol A results in decreased expression of ITGB6 mRNA | 25181051; 30816183; |
C000611646 | bisphenol F | bisphenol F results in increased expression of ITGB6 mRNA | 30951980 |
D000069286 | Bortezomib | Bortezomib results in increased expression of ITGB6 mRNA | 20977926 |
D002101 | Cacodylic Acid | Cacodylic Acid results in decreased expression of ITGB6 mRNA | 17720352 |
D019256 | Cadmium Chloride | Cadmium Chloride results in decreased expression of ITGB6 mRNA | 23741332 |
D002117 | Calcitriol | Calcitriol results in increased expression of ITGB6 mRNA | 21592394 |
D002117 | Calcitriol | [Testosterone co-treated with Calcitriol] results in increased expression of ITGB6 mRNA | 21592394 |
D002251 | Carbon Tetrachloride | Carbon Tetrachloride results in decreased expression of ITGB6 mRNA | 25827057 |
D002737 | Chloroprene | Chloroprene results in decreased expression of ITGB6 mRNA | 23125180 |
D002794 | Choline | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of ITGB6 mRNA | 20938992 |
D002945 | Cisplatin | [Cisplatin co-treated with jinfukang] results in decreased expression of ITGB6 mRNA | 27392435 |
D002945 | Cisplatin | Cisplatin results in decreased expression of ITGB6 mRNA | 27392435 |
C018021 | cobaltous chloride | cobaltous chloride results in decreased expression of ITGB6 mRNA | 24386269 |
D003042 | Cocaine | Cocaine results in increased expression of ITGB6 mRNA | 18000554 |
D003300 | Copper | [Copper deficiency co-treated with tetrathiomolybdate] results in decreased expression of ITGB6 mRNA | 22276220 |
D003471 | Cuprizone | Cuprizone results in increased expression of ITGB6 mRNA | 26577399 |
D003513 | Cycloheximide | Cycloheximide inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of ITGB6 mRNA] | 11007951 |
D003513 | Cycloheximide | Cycloheximide inhibits the reaction [TGFB1 protein results in increased expression of ITGB6 mRNA] | 21303922 |
D016572 | Cyclosporine | Cyclosporine results in decreased expression of ITGB6 mRNA | 27989131 |
C017160 | cypermethrin | cypermethrin results in increased expression of ITGB6 mRNA | 22528246 |
D003907 | Dexamethasone | Dexamethasone inhibits the reaction [RX3 gene mutant form affects the expression of ITGB6 mRNA] | 27941970 |
D016264 | Dextran Sulfate | [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in increased expression of ITGB6 mRNA | 29950665 |
D003993 | Dibutyl Phthalate | Dibutyl Phthalate results in increased expression of ITGB6 mRNA | 21266533 |
D004041 | Dietary Fats | Dietary Fats results in decreased expression of ITGB6 mRNA | 25016146 |
D004051 | Diethylhexyl Phthalate | Diethylhexyl Phthalate results in decreased expression of ITGB6 protein | 31163220 |
D004051 | Diethylhexyl Phthalate | Diethylhexyl Phthalate results in increased expression of ITGB6 mRNA | 31163220 |
D004052 | Diethylnitrosamine | [Diethylnitrosamine co-treated with beta-Naphthoflavone] results in increased expression of ITGB6 mRNA | 18164116 |
C516138 | dorsomorphin | [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of ITGB6 mRNA | 27188386 |
C516138 | dorsomorphin | [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of ITGB6 mRNA | 27188386 |
C529593 | EMD 527040 | EMD 527040 binds to and results in decreased activity of [ITGA5 protein binds to ITGB6 protein] | 18221819 |
D004726 | Endosulfan | Endosulfan results in decreased expression of ITGB6 mRNA | 29391264 |
D004958 | Estradiol | EGF protein inhibits the reaction [Estradiol results in decreased expression of ITGB6 mRNA] | 24758408 |
D004958 | Estradiol | [Estradiol co-treated with Progesterone] results in decreased expression of ITGB6 mRNA | 20660070 |
D004958 | Estradiol | [Estradiol co-treated with TGFB1 protein] results in increased expression of ITGB6 mRNA | 30165855 |
D004958 | Estradiol | Estradiol results in decreased expression of ITGB6 mRNA | 23019147; 24758408; 25321415; |
D004958 | Estradiol | [Progesterone co-treated with Estradiol] results in decreased expression of ITGB6 mRNA | 17404688 |
D004997 | Ethinyl Estradiol | Ethinyl Estradiol affects the expression of ITGB6 mRNA | 26865667 |
D004997 | Ethinyl Estradiol | Ethinyl Estradiol results in increased expression of ITGB6 mRNA | 17557909 |
D004997 | Ethinyl Estradiol | Ethinyl Estradiol results in decreased expression of ITGB6 mRNA | 23129252 |
D005492 | Folic Acid | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of ITGB6 mRNA | 20938992 |
C039281 | furan | furan results in increased expression of ITGB6 mRNA | 27387713 |
C039281 | furan | furan results in increased methylation of ITGB6 gene | 22079235 |
C056507 | gemcitabine | [ITGB6 co-treated with ITGAV] affects the susceptibility to gemcitabine | 20150628 |
D019833 | Genistein | Genistein affects the expression of ITGB6 mRNA | 26865667 |
D019833 | Genistein | Genistein results in decreased expression of ITGB6 mRNA | 23019147 |
C071834 | glycidamide | glycidamide results in decreased expression of ITGB6 mRNA | 17822822 |
D006861 | Hydrogen Peroxide | Hydrogen Peroxide results in decreased expression of ITGB6 mRNA | 12419474 |
C041508 | indeno(1,2,3-cd)pyrene | indeno(1,2,3-cd)pyrene results in decreased expression of ITGB6 mRNA | 26377693 |
C016517 | indole-3-carbinol | indole-3-carbinol affects the expression of ITGB6 mRNA | 21396975 |
C544151 | jinfukang | [Cisplatin co-treated with jinfukang] results in decreased expression of ITGB6 mRNA | 27392435 |
C561695 | (+)-JQ1 compound | (+)-JQ1 compound results in decreased expression of ITGB6 mRNA | 24796395 |
C000589733 | leukadherin-1 | FGG protein affects the reaction [leukadherin-1 inhibits the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA]] | 26921287 |
C000589733 | leukadherin-1 | leukadherin-1 inhibits the reaction [1-Naphthylisothiocyanate results in increased expression of ITGB6 mRNA] | 26921287 |
C025340 | manganese chloride | manganese chloride results in decreased methylation of ITGB6 gene | 27913844 |
C025340 | manganese chloride | manganese chloride results in increased expression of ITGB6 mRNA | 28801915 |
C025340 | manganese chloride | manganese chloride results in increased methylation of ITGB6 gene | 28801915 |
C042720 | mercuric bromide | mercuric bromide results in increased expression of ITGB6 mRNA | 26272509 |
C042720 | mercuric bromide | [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of ITGB6 mRNA | 27188386 |
D008713 | Methimazole | Methimazole results in increased expression of ITGB6 mRNA | 22504374 |
D008715 | Methionine | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of ITGB6 mRNA | 20938992 |
C406082 | monomethylarsonous acid | monomethylarsonous acid results in decreased expression of ITGB6 mRNA | 23876855 |
D037742 | Nanotubes, Carbon | Nanotubes, Carbon analog results in increased expression of ITGB6 mRNA | 25554681 |
D037742 | Nanotubes, Carbon | Nanotubes, Carbon results in increased expression of ITGB6 mRNA | 25554681 |
D009532 | Nickel | Nickel results in increased expression of ITGB6 mRNA | 25583101 |
D009534 | Niclosamide | Niclosamide results in increased expression of ITGB6 mRNA | 31398420 |
D018817 | N-Methyl-3,4-methylenedioxyamphetamine | N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of ITGB6 mRNA | 26251327 |
D018817 | N-Methyl-3,4-methylenedioxyamphetamine | N-Methyl-3,4-methylenedioxyamphetamine results in increased methylation of ITGB6 promoter | 26251327 |
D017239 | Paclitaxel | Paclitaxel results in decreased expression of ITGB6 mRNA | 19682730 |
D010416 | Pentachlorophenol | Pentachlorophenol results in increased expression of ITGB6 mRNA | 29458080 |
C101814 | perfluoro-n-undecanoic acid | perfluoro-n-undecanoic acid results in increased expression of ITGB6 mRNA | 23602845 |
D010662 | Phenylmercuric Acetate | [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of ITGB6 mRNA | 27188386 |
C006253 | pirinixic acid | [pirinixic acid binds to and results in increased activity of PPARA protein] which results in increased expression of ITGB6 mRNA | 19710929 |
D017035 | Pravastatin | Pravastatin affects the expression of ITGB6 mRNA | 27225895 |
D011374 | Progesterone | [Estradiol co-treated with Progesterone] results in decreased expression of ITGB6 mRNA | 20660070 |
D011374 | Progesterone | [Progesterone co-treated with Estradiol] results in decreased expression of ITGB6 mRNA | 17404688 |
D011441 | Propylthiouracil | Propylthiouracil results in increased expression of ITGB6 mRNA | 22504374 |
C093642 | SB 203580 | SB 203580 inhibits the reaction [TGFB1 protein results in increased expression of ITGB6 mRNA] | 21303922 |
D012822 | Silicon Dioxide | Silicon Dioxide analog results in decreased expression of ITGB6 mRNA | 25895662 |
C009277 | sodium arsenate | sodium arsenate results in decreased expression of ITGB6 mRNA | 12727804 |
C017947 | sodium arsenite | sodium arsenite results in decreased expression of ITGB6 mRNA | 12727804; 23876855; 25879800; |
D053260 | Soot | Soot results in increased expression of ITGB6 mRNA | 22461453; 26551751; |
C075117 | squalestatin 1 | squalestatin 1 affects the expression of ITGB6 mRNA | 27225895 |
C075117 | squalestatin 1 | squalestatin 1 results in decreased expression of ITGB6 mRNA | 27225895 |
D013605 | T-2 Toxin | T-2 Toxin results in decreased expression of ITGB6 mRNA | 31299295 |
D020122 | tert-Butylhydroperoxide | tert-Butylhydroperoxide results in decreased expression of ITGB6 mRNA | 12419474 |
D013739 | Testosterone | [Testosterone co-treated with Calcitriol] results in increased expression of ITGB6 mRNA | 21592394 |
D013739 | Testosterone | Testosterone results in increased expression of ITGB6 mRNA | 21592394 |
D013749 | Tetrachlorodibenzodioxin | Cycloheximide inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of ITGB6 mRNA] | 11007951 |
D013749 | Tetrachlorodibenzodioxin | Tetrachlorodibenzodioxin affects the expression of ITGB6 mRNA | 22298810 |
D013749 | Tetrachlorodibenzodioxin | Tetrachlorodibenzodioxin results in decreased expression of ITGB6 mRNA | 23152189 |
D013749 | Tetrachlorodibenzodioxin | Tetrachlorodibenzodioxin results in increased expression of ITGB6 mRNA | 11007951 |
D013755 | Tetradecanoylphorbol Acetate | [Zinc co-treated with Tetradecanoylphorbol Acetate] affects the expression of ITGB6 mRNA | 16979875 |
C020809 | tetrathiomolybdate | [Copper deficiency co-treated with tetrathiomolybdate] results in decreased expression of ITGB6 mRNA | 22276220 |
D013853 | Thioacetamide | Thioacetamide results in increased expression of ITGB6 mRNA | 18221819 |
C009495 | titanium dioxide | titanium dioxide results in increased expression of ITGB6 mRNA | 19695317 |
C009495 | titanium dioxide | [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in increased expression of ITGB6 mRNA | 29950665 |
C009495 | titanium dioxide | titanium dioxide results in increased expression of ITGB6 mRNA | 23557971 |
D014028 | Tobacco Smoke Pollution | Tobacco Smoke Pollution affects the expression of ITGB6 protein | 30291989 |
D014118 | Toxins, Biological | Toxins, Biological affects the expression of ITGB6 mRNA | 19682533 |
C012589 | trichostatin A | trichostatin A results in increased expression of ITGB6 mRNA | 24935251 |
D017974 | Uranium Compounds | Uranium Compounds results in increased expression of ITGB6 mRNA | 19654044 |
D014635 | Valproic Acid | Valproic Acid results in increased expression of ITGB6 mRNA | 24383497 |
D014635 | Valproic Acid | Valproic Acid results in increased methylation of ITGB6 gene | 29154799 |
D001335 | Vehicle Emissions | Vehicle Emissions results in decreased methylation of ITGB6 gene | 25560391 |
C025643 | vinclozolin | vinclozolin affects the expression of ITGB6 mRNA | 19015723 |
D015032 | Zinc | [Zinc co-treated with Tetradecanoylphorbol Acetate] affects the expression of ITGB6 mRNA | 16979875 |
D015032 | Zinc | Zinc results in decreased expression of ITGB6 mRNA | 19071009 |
D015032 | Zinc | Zinc results in increased expression of ITGB6 mRNA | 16870260 |
C016837 | zinc chloride | zinc chloride results in increased expression of ITGB6 mRNA | 16870260 |
Keyword ID | Keyword Term |
---|---|
KW-0002 | 3D-structure |
KW-0025 | Alternative splicing |
KW-0986 | Amelogenesis imperfecta |
KW-0130 | Cell adhesion |
KW-0965 | Cell junction |
KW-0225 | Disease mutation |
KW-1015 | Disulfide bond |
KW-0325 | Glycoprotein |
KW-1183 | Host cell receptor for virus entry |
KW-0945 | Host-virus interaction |
KW-0401 | Integrin |
KW-0472 | Membrane |
KW-0621 | Polymorphism |
KW-0675 | Receptor |
KW-1185 | Reference proteome |
KW-0677 | Repeat |
KW-0732 | Signal |
KW-0812 | Transmembrane |
KW-1133 | Transmembrane helix |
InterPro ID | InterPro Term |
---|---|
IPR013111 | EGF_extracell |
IPR040622 | I-EGF_1 |
IPR033760 | Integrin_beta_N |
IPR015812 | Integrin_bsu |
IPR015436 | Integrin_bsu-6 |
IPR014836 | Integrin_bsu_cyt_dom |
IPR012896 | Integrin_bsu_tail |
IPR036349 | Integrin_bsu_tail_dom_sf |
IPR002369 | Integrin_bsu_VWA |
IPR032695 | Integrin_dom_sf |
IPR016201 | PSI |
IPR036465 | vWFA_dom_sf |