Gene: Kif3a

Basic information

Tag Content
Uniprot ID P28741; Q7TSZ7;
Entrez ID 16568
Genbank protein ID AAH52707.1; BAA02166.1;
Genbank nucleotide ID NM_008443.4; NM_001290805.1; NM_001290806.1;
Ensembl protein ID ENSMUSP00000112782
Ensembl nucleotide ID ENSMUSG00000018395
Gene name Kinesin-like protein KIF3A
Gene symbol Kif3a
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO,CLP
Developmental stage
Data sources Manually collected
Reference 20106874; 21429982; 27802276; 28346501;
Functional description Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro. Plays a role in primary cilia formation (PubMed:21670265). Plays a role in centriole cohesion and subdistal appendage organization and function. Regulates the formation of the subdistal appendage via recruitment of DCTN1 to the centriole. Also required for ciliary basal feet formation and microtubule anchoring to mother centriole (PubMed:23386061).
Sequence
MPINKSEKPE SCDNVKVVVR CRPLNEREKS MCYRQAVSVD EMRGTITVHK TDSSNEPPKT 60
FTFDTVFGPE SKQLDVYNLT ARPIIDSVLE GYNGTIFAYG QTGTGKTFTM EGVRAVPGLR 120
GVIPNSFAHI FGHIAKAEGD TRFLVRVSYL EIYNEEVRDL LGKDQTQRLE VKERPDVGVY 180
IKDLSAYVVN NADDMDRIMT LGHKNRSVGA TNMNEHSSRS HAIFTITIEC SEKGVDGNMH 240
VRMGKLHLVD LAGSERQAKT GATGQRLKEA TKINLSLSTL GNVISALVDG KSTHVPYRNS 300
KLTRLLQDSL GGNSKTMMCA NIGPADYNYD ETISTLRYAN RAKNIKNKAR INEDPKDALL 360
RQFQKEIEEL KKKLEEGEEV SGSDISGSEE DDEEGELGED GEKKKKRRDQ AGKKKVSPDK 420
MVEMQAKIDE ERKALETKLD MEEEERNKAR AELERREKDL LKAQQEHQSL LEKLSALEKK 480
VIVGGVDLLA KAEEQEKLLE ESNMELEERR RRAEQLRKEL EEKEQERLDI EEKYTSLQEE 540
AQGKTKKLKK VWTMLMAAKS EMADLQQEHQ REIEGLLENI RQLSRELRLQ MLIIDNFIPQ 600
DYQEMIENYV HWNEDIGEWQ LKCVAYTGNN MRKQTPVPDK KERDPFEVDL SHVYLAYTEE 660
SLRQSLMKLE RPRTSKGKAR PKMGRRKRSA KPETVIDSLL Q 701

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database


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Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003777 microtubule motor activityIBA
GO:0005515 protein bindingIPI
GO:0005524 ATP bindingIEA
GO:0008017 microtubule bindingIDA
GO:0008017 microtubule bindingIBA
GO:0016887 ATPase activityIBA
GO:0017137 Rab GTPase bindingISO
GO:0019894 kinesin bindingISO
GO:0019903 protein phosphatase bindingISO
GO:0030507 spectrin bindingISO
GO:0044877 protein-containing complex bindingISO
GO:0120170 intraciliary transport particle B bindingIDA

GO:Biological Process

GO ID GO Term Evidence
GO:0001701 in utero embryonic developmentIGI
GO:0001822 kidney developmentIMP
GO:0001947 heart loopingIMP
GO:0007018 microtubule-based movementIBA
GO:0007224 smoothened signaling pathwayIMP
GO:0007368 determination of left/right symmetryIMP
GO:0007411 axon guidanceIBA
GO:0007507 heart developmentIMP
GO:0008089 anterograde axonal transportIBA
GO:0008544 epidermis developmentIMP
GO:0009952 anterior/posterior pattern specificationIMP
GO:0009953 dorsal/ventral pattern formationIMP
GO:0010457 centriole-centriole cohesionIMP
GO:0015031 protein transportISO
GO:0021542 dentate gyrus developmentIMP
GO:0021904 dorsal/ventral neural tube patterningIGI
GO:0021904 dorsal/ventral neural tube patterningIMP
GO:0021915 neural tube developmentIMP
GO:0034454 microtubule anchoring at centrosomeIMP
GO:0036334 epidermal stem cell homeostasisIMP
GO:0044458 motile cilium assemblyIMP
GO:0048260 positive regulation of receptor-mediated endocytosisISO
GO:0050679 positive regulation of epithelial cell proliferationIMP
GO:0060122 inner ear receptor cell stereocilium organizationIMP
GO:0060271 cilium assemblyIMP
GO:0060271 cilium assemblyIBA
GO:0061351 neural precursor cell proliferationIMP
GO:0090316 positive regulation of intracellular protein transportISO
GO:1902414 protein localization to cell junctionISO
GO:1905128 positive regulation of axo-dendritic protein transportISO
GO:1905515 non-motile cilium assemblyIMP
GO:2000771 positive regulation of establishment or maintenance of cell polarity regulating cell shapeISO

GO:Cellular Component

GO ID GO Term Evidence
GO:0005813 centrosomeISO
GO:0005814 centrioleISO
GO:0005814 centrioleIDA
GO:0005829 cytosolTAS
GO:0005871 kinesin complexIBA
GO:0005874 microtubuleIBA
GO:0005929 ciliumIDA
GO:0005930 axonemeISO
GO:0015630 microtubule cytoskeletonISO
GO:0016939 kinesin II complexISO
GO:0016939 kinesin II complexIDA
GO:0031514 motile ciliumIDA
GO:0032391 photoreceptor connecting ciliumIDA
GO:0043005 neuron projectionIDA
GO:0043025 neuronal cell bodyISO
GO:1904115 axon cytoplasmISO
GO:0005876 spindle microtubuleISO
GO:0097470 ribbon synapseISO

Reactome Pathway

Reactome ID Reactome Term Evidence
R-MMU-109582 HemostasisIEA
R-MMU-1280218 Adaptive Immune SystemIEA
R-MMU-162582 Signal TransductionIEA
R-MMU-168256 Immune SystemIEA
R-MMU-1852241 Organelle biogenesis and maintenanceIEA
R-MMU-199991 Membrane TraffickingIEA
R-MMU-2132295 MHC class II antigen presentationIEA
R-MMU-5358351 Signaling by HedgehogIEA
R-MMU-5610787 Hedgehog 'off' stateIEA
R-MMU-5617833 Cilium AssemblyIEA
R-MMU-5620924 Intraflagellar transportIEA
R-MMU-5632684 Hedgehog 'on' stateIEA
R-MMU-5635838 Activation of SMOIEA
R-MMU-5653656 Vesicle-mediated transportIEA
R-MMU-6811434 COPI-dependent Golgi-to-ER retrograde trafficIEA
R-MMU-6811442 Intra-Golgi and retrograde Golgi-to-ER trafficIEA
R-MMU-8856688 Golgi-to-ER retrograde transportIEA
R-MMU-983189 KinesinsIEA
R-MMU-983231 Factors involved in megakaryocyte development and platelet productionIEA

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0067 ATP-binding
KW-0966 Cell projection
KW-0969 Cilium
KW-0970 Cilium biogenesis/degradation
KW-0175 Coiled coil
KW-0963 Cytoplasm
KW-0206 Cytoskeleton
KW-0493 Microtubule
KW-0505 Motor protein
KW-0547 Nucleotide-binding
KW-0597 Phosphoprotein
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR027640 Kinesin-like_fam
IPR019821 Kinesin_motor_CS
IPR001752 Kinesin_motor_dom
IPR036961 Kinesin_motor_dom_sf
IPR027417 P-loop_NTPase

PROSITE

PROSITE ID PROSITE Term
PS00411 KINESIN_MOTOR_1
PS50067 KINESIN_MOTOR_2

Pfam

Pfam ID Pfam Term
PF00225 Kinesin

Protein-protein interaction

Protein-miRNA interaction