Gene: MYH9

Basic information

Tag Content
Uniprot ID P35579; A8K6E4; O60805; Q60FE2; Q86T83;
Entrez ID 4627
Genbank protein ID CAD89954.1; BAD52439.1; CAG30412.1; EAW60096.1; AAA61765.1; AAA36349.1; BAF84298.1; AAA59888.1; BAG06729.1;
Genbank nucleotide ID XM_017028805.1; XM_017028806.1; NM_002473.5; XM_017028804.1; XM_011530197.2; XM_017028803.1;
Ensembl protein ID ENSP00000216181
Ensembl nucleotide ID ENSG00000100345
Gene name Myosin-9
Gene symbol MYH9
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type CPO,CL/P
Developmental stage
Data sources Manually collected
Reference 18716610; 19320731; 19891592;
Functional description Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping. During cell spreading, plays an important role in cytoskeleton reorganization, focal contacts formation (in the margins but not the central part of spreading cells), and lamellipodial retraction; this function is mechanically antagonized by MYH10.
Sequence
MAQQAADKYL YVDKNFINNP LAQADWAAKK LVWVPSDKSG FEPASLKEEV GEEAIVELVE 60
NGKKVKVNKD DIQKMNPPKF SKVEDMAELT CLNEASVLHN LKERYYSGLI YTYSGLFCVV 120
INPYKNLPIY SEEIVEMYKG KKRHEMPPHI YAITDTAYRS MMQDREDQSI LCTGESGAGK 180
TENTKKVIQY LAYVASSHKS KKDQGELERQ LLQANPILEA FGNAKTVKND NSSRFGKFIR 240
INFDVNGYIV GANIETYLLE KSRAIRQAKE ERTFHIFYYL LSGAGEHLKT DLLLEPYNKY 300
RFLSNGHVTI PGQQDKDMFQ ETMEAMRIMG IPEEEQMGLL RVISGVLQLG NIVFKKERNT 360
DQASMPDNTA AQKVSHLLGI NVTDFTRGIL TPRIKVGRDY VQKAQTKEQA DFAIEALAKA 420
TYERMFRWLV LRINKALDKT KRQGASFIGI LDIAGFEIFD LNSFEQLCIN YTNEKLQQLF 480
NHTMFILEQE EYQREGIEWN FIDFGLDLQP CIDLIEKPAG PPGILALLDE ECWFPKATDK 540
SFVEKVMQEQ GTHPKFQKPK QLKDKADFCI IHYAGKVDYK ADEWLMKNMD PLNDNIATLL 600
HQSSDKFVSE LWKDVDRIIG LDQVAGMSET ALPGAFKTRK GMFRTVGQLY KEQLAKLMAT 660
LRNTNPNFVR CIIPNHEKKA GKLDPHLVLD QLRCNGVLEG IRICRQGFPN RVVFQEFRQR 720
YEILTPNSIP KGFMDGKQAC VLMIKALELD SNLYRIGQSK VFFRAGVLAH LEEERDLKIT 780
DVIIGFQACC RGYLARKAFA KRQQQLTAMK VLQRNCAAYL KLRNWQWWRL FTKVKPLLQV 840
SRQEEEMMAK EEELVKVREK QLAAENRLTE METLQSQLMA EKLQLQEQLQ AETELCAEAE 900
ELRARLTAKK QELEEICHDL EARVEEEEER CQHLQAEKKK MQQNIQELEE QLEEEESARQ 960
KLQLEKVTTE AKLKKLEEEQ IILEDQNCKL AKEKKLLEDR IAEFTTNLTE EEEKSKSLAK 1020
LKNKHEAMIT DLEERLRREE KQRQELEKTR RKLEGDSTDL SDQIAELQAQ IAELKMQLAK 1080
KEEELQAALA RVEEEAAQKN MALKKIRELE SQISELQEDL ESERASRNKA EKQKRDLGEE 1140
LEALKTELED TLDSTAAQQE LRSKREQEVN ILKKTLEEEA KTHEAQIQEM RQKHSQAVEE 1200
LAEQLEQTKR VKANLEKAKQ TLENERGELA NEVKVLLQGK GDSEHKRKKV EAQLQELQVK 1260
FNEGERVRTE LADKVTKLQV ELDNVTGLLS QSDSKSSKLT KDFSALESQL QDTQELLQEE 1320
NRQKLSLSTK LKQVEDEKNS FREQLEEEEE AKHNLEKQIA TLHAQVADMK KKMEDSVGCL 1380
ETAEEVKRKL QKDLEGLSQR HEEKVAAYDK LEKTKTRLQQ ELDDLLVDLD HQRQSACNLE 1440
KKQKKFDQLL AEEKTISAKY AEERDRAEAE AREKETKALS LARALEEAME QKAELERLNK 1500
QFRTEMEDLM SSKDDVGKSV HELEKSKRAL EQQVEEMKTQ LEELEDELQA TEDAKLRLEV 1560
NLQAMKAQFE RDLQGRDEQS EEKKKQLVRQ VREMEAELED ERKQRSMAVA ARKKLEMDLK 1620
DLEAHIDSAN KNRDEAIKQL RKLQAQMKDC MRELDDTRAS REEILAQAKE NEKKLKSMEA 1680
EMIQLQEELA AAERAKRQAQ QERDELADEI ANSSGKGALA LEEKRRLEAR IAQLEEELEE 1740
EQGNTELIND RLKKANLQID QINTDLNLER SHAQKNENAR QQLERQNKEL KVKLQEMEGT 1800
VKSKYKASIT ALEAKIAQLE EQLDNETKER QAACKQVRRT EKKLKDVLLQ VDDERRNAEQ 1860
YKDQADKAST RLKQLKRQLE EAEEEAQRAN ASRRKLQREL EDATETADAM NREVSSLKNK 1920
LRRGDLPFVV PRRMARKGAG DGSDEEVDGK ADGAEAKPAE

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologMYH9F1P9J3Canis lupus familiarisPredictionMore>>
1:1 orthologMYH9A0A452FAS7Capra hircusPredictionMore>>
1:1 orthologMYH94627P35579CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologMyh917886Q8VDD5Mus musculusPredictionMore>>
1:1 orthologMYH9A0A2I3T2I7Pan troglodytesPredictionMore>>
1:1 orthologMyh925745G3V6P7Rattus norvegicusPredictionMore>>
1:1 orthologmyh9bF1QJK4Danio rerioPredictionMore>>

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
MYH9rs2269529T>CTDT19891592
MYH9rs16996652A>TTDT19891592
MYH9rs7078PCR; TDT19320731
MYH9rs1002246Linkage analysis18716610
MYH9rs2269529T>C; c.4876A>G; p.I1626VWES and Sanger sequencing26449438

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0000146 microfilament motor activityIDA
GO:0003723 RNA bindingHDA
GO:0003774 motor activityNAS
GO:0003779 actin bindingIDA
GO:0005178 integrin bindingIDA
GO:0005515 protein bindingIPI
GO:0005516 calmodulin bindingIEA
GO:0005524 ATP bindingIDA
GO:0016887 ATPase activityIDA
GO:0019904 protein domain specific bindingIPI
GO:0030898 actin-dependent ATPase activityIDA
GO:0042803 protein homodimerization activityIDA
GO:0043495 protein membrane adaptorIMP
GO:0043531 ADP bindingIDA
GO:0045296 cadherin bindingHDA
GO:0051015 actin filament bindingIDA
GO:0051015 actin filament bindingNAS

GO:Biological Process

GO ID GO Term Evidence
GO:0000212 meiotic spindle organizationIEA
GO:0001525 angiogenesisIDA
GO:0001701 in utero embryonic developmentIEA
GO:0001768 establishment of T cell polarityIEA
GO:0001778 plasma membrane repairIDA
GO:0006509 membrane protein ectodomain proteolysisIDA
GO:0006911 phagocytosis, engulfmentISS
GO:0007229 integrin-mediated signaling pathwayNAS
GO:0007520 myoblast fusionIEA
GO:0008360 regulation of cell shapeIMP
GO:0015031 protein transportIMP
GO:0030048 actin filament-based movementIDA
GO:0030220 platelet formationIMP
GO:0030224 monocyte differentiationIEP
GO:0031032 actomyosin structure organizationIDA
GO:0031532 actin cytoskeleton reorganizationIMP
GO:0032418 lysosome localizationIMP
GO:0032506 cytokinetic processIMP
GO:0032796 uropod organizationIEA
GO:0043534 blood vessel endothelial cell migrationIMP
GO:0045055 regulated exocytosisIMP
GO:0050900 leukocyte migrationNAS
GO:0051295 establishment of meiotic spindle localizationIEA
GO:0070527 platelet aggregationHMP
GO:1903919 negative regulation of actin filament severingISS
GO:1903919 negative regulation of actin filament severingIMP
GO:1903923 positive regulation of protein processing in phagocytic vesicleISS
GO:1905684 regulation of plasma membrane repairIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0001725 stress fiberIDA
GO:0001726 ruffleIDA
GO:0001931 uropodIDA
GO:0005623 cellIEA
GO:0005634 nucleusIDA
GO:0005737 cytoplasmIDA
GO:0005819 spindleIEA
GO:0005826 actomyosin contractile ringIDA
GO:0005829 cytosolIDA
GO:0005829 cytosolTAS
GO:0005886 plasma membraneIDA
GO:0005903 brush borderIEA
GO:0005912 adherens junctionIEA
GO:0015629 actin cytoskeletonIDA
GO:0016020 membraneHDA
GO:0016460 myosin II complexIDA
GO:0031252 cell leading edgeIDA
GO:0031594 neuromuscular junctionIEA
GO:0032154 cleavage furrowIDA
GO:0032991 protein-containing complexIDA
GO:0042641 actomyosinIDA
GO:0070062 extracellular exosomeHDA
GO:0097513 myosin II filamentIDA
GO:0001772 immunological synapseIDA
GO:0005925 focal adhesionISS
GO:0008180 COP9 signalosomeIDA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-1266738 Developmental BiologyIEA
R-HSA-1445148 Translocation of SLC2A4 (GLUT4) to the plasma membraneIEA
R-HSA-162582 Signal TransductionIEA
R-HSA-162582 Signal TransductionTAS
R-HSA-168249 Innate Immune SystemTAS
R-HSA-168256 Immune SystemTAS
R-HSA-194315 Signaling by Rho GTPasesIEA
R-HSA-194315 Signaling by Rho GTPasesTAS
R-HSA-195258 RHO GTPase EffectorsIEA
R-HSA-195258 RHO GTPase EffectorsTAS
R-HSA-199991 Membrane TraffickingIEA
R-HSA-2029480 Fcgamma receptor (FCGR) dependent phagocytosisTAS
R-HSA-2029482 Regulation of actin dynamics for phagocytic cup formationTAS
R-HSA-2682334 EPH-Ephrin signalingIEA
R-HSA-373755 Semaphorin interactionsIEA
R-HSA-3928663 EPHA-mediated growth cone collapseIEA
R-HSA-400685 Sema4D in semaphorin signalingIEA
R-HSA-416572 Sema4D induced cell migration and growth-cone collapseIEA
R-HSA-422475 Axon guidanceIEA
R-HSA-5625740 RHO GTPases activate PKNsIEA
R-HSA-5625900 RHO GTPases activate CITIEA
R-HSA-5627117 RHO GTPases Activate ROCKsIEA
R-HSA-5627123 RHO GTPases activate PAKsIEA
R-HSA-5627123 RHO GTPases activate PAKsTAS
R-HSA-5653656 Vesicle-mediated transportIEA

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0007 Acetylation
KW-0009 Actin-binding
KW-0023 Alport syndrome
KW-0025 Alternative splicing
KW-0067 ATP-binding
KW-0112 Calmodulin-binding
KW-0898 Cataract
KW-0130 Cell adhesion
KW-0133 Cell shape
KW-0175 Coiled coil
KW-0963 Cytoplasm
KW-0206 Cytoskeleton
KW-0209 Deafness
KW-0903 Direct protein sequencing
KW-0225 Disease mutation
KW-0488 Methylation
KW-0505 Motor protein
KW-0518 Myosin
KW-1010 Non-syndromic deafness
KW-0547 Nucleotide-binding
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0832 Ubl conjugation

Interpro

InterPro ID InterPro Term
IPR000048 IQ_motif_EF-hand-BS
IPR036961 Kinesin_motor_dom_sf
IPR001609 Myosin_head_motor_dom
IPR027401 Myosin_IQ_contain_sf
IPR004009 Myosin_N
IPR008989 Myosin_S1_N
IPR002928 Myosin_tail
IPR027417 P-loop_NTPase
IPR036305 RGS_sf

PROSITE

PROSITE ID PROSITE Term
PS50096 IQ
PS51456 MYOSIN_MOTOR
PS51844 SH3_LIKE

Pfam

Pfam ID Pfam Term
PF00063 Myosin_head
PF02736 Myosin_N
PF01576 Myosin_tail_1

Protein-protein interaction

Protein-miRNA interaction