Gene: DLX5

Basic information

Tag Content
Uniprot ID P56178; B7Z4P3; Q9UPL1;
Entrez ID 1749
Genbank protein ID AAH06226.1; AAC17833.1; BAH12629.1; BAB14587.1;
Genbank nucleotide ID NM_005221.5
Ensembl protein ID ENSP00000475008; ENSP00000498116;
Ensembl nucleotide ID ENSG00000105880
Gene name Homeobox protein DLX-5
Gene symbol DLX5
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Transcriptional factor involved in bone development. Acts as an immediate early BMP-responsive transcriptional activator essential for osteoblast differentiation. Stimulates ALPL promoter activity in a RUNX2-independent manner during osteoblast differentiation. Stimulates SP7 promoter activity during osteoblast differentiation. Promotes cell proliferation by up-regulating MYC promoter activity. Involved as a positive regulator of both chondrogenesis and chondrocyte hypertrophy in the endochondral skeleton. Binds to the homeodomain-response element of the ALPL and SP7 promoter. Binds to the MYC promoter. Requires the 5'-TAATTA-3' consensus sequence for DNA-binding.
Sequence
MTGVFDRRVP SIRSGDFQAP FQTSAAMHHP SQESPTLPES SATDSDYYSP TGGAPHGYCS 60
PTSASYGKAL NPYQYQYHGV NGSAGSYPAK AYADYSYASS YHQYGGAYNR VPSATNQPEK 120
EVTEPEVRMV NGKPKKVRKP RTIYSSFQLA ALQRRFQKTQ YLALPERAEL AASLGLTQTQ 180
VKIWFQNKRS KIKKIMKNGE MPPEHSPSSS DPMACNSPQS PAVWEPQGSS RSLSHHPHAH 240
PPTSNQSPAS SYLENSASWY TSAASSINSH LPPPGSLQHP LALASGTLY 289

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database


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Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologDLX5507415Q1RMR7Bos taurusPredictionMore>>
1:1 orthologDLX5482313E2RJY3Canis lupus familiarisPredictionMore>>
1:1 orthologDLX5102184778A0A452DYR1Capra hircusPredictionMore>>
1:1 orthologDLX5100052263F7DY45Equus caballusPredictionMore>>
1:1 orthologDLX51749P56178Homo sapiensPredictionMore>>
1:1 orthologDlx513395P70396CPOE13.5Mus musculusPublicationMore>>
1:1 orthologDLX5463554H2QUZ2Pan troglodytesPredictionMore>>
1:1 orthologDLX5A0A287AIX4Sus scrofaPredictionMore>>
1:1 orthologDLX5100008630G1SVH5Oryctolagus cuniculusPredictionMore>>
1:1 orthologDlx525431A0A0G2JSK6Rattus norvegicusPredictionMore>>
1:1 orthologdlx5a30569Q5XJL9Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA bindingISS
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA bindingIBA
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specificISA
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specificISM
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specificISS
GO:0003700 DNA-binding transcription factor activityIBA
GO:0043565 sequence-specific DNA bindingIBA
GO:0044212 transcription regulatory region DNA bindingIDA
GO:0071837 HMG box domain bindingIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0001501 skeletal system developmentTAS
GO:0001649 osteoblast differentiationISS
GO:0001958 endochondral ossificationISS
GO:0006357 regulation of transcription by RNA polymerase IIIBA
GO:0007399 nervous system developmentTAS
GO:0008283 cell population proliferationIDA
GO:0021889 olfactory bulb interneuron differentiationIEA
GO:0030154 cell differentiationIBA
GO:0030326 embryonic limb morphogenesisIEA
GO:0030509 BMP signaling pathwayISS
GO:0030855 epithelial cell differentiationIEA
GO:0042472 inner ear morphogenesisIEA
GO:0045893 positive regulation of transcription, DNA-templatedIDA
GO:0045944 positive regulation of transcription by RNA polymerase IIIBA
GO:0048646 anatomical structure formation involved in morphogenesisIBA
GO:0050679 positive regulation of epithelial cell proliferationIEA
GO:0060021 roof of mouth developmentIEA
GO:0060166 olfactory pit developmentIEA
GO:0060325 face morphogenesisIEA
GO:0071773 cellular response to BMP stimulusISS
GO:0090263 positive regulation of canonical Wnt signaling pathwayIEA
GO:0097376 interneuron axon guidanceIEA
GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulusISS

GO:Cellular Component

GO ID GO Term Evidence
GO:0000790 nuclear chromatinISS
GO:0000790 nuclear chromatinISA
GO:0005634 nucleusIBA
GO:0005737 cytoplasmIEA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-212436 Generic Transcription PathwayIEA
R-HSA-73857 RNA Polymerase II TranscriptionIEA
R-HSA-74160 Gene expression (Transcription)IEA
R-HSA-8878166 Transcriptional regulation by RUNX2IEA
R-HSA-8939902 Regulation of RUNX2 expression and activityIEA

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0010 Activator
KW-0025 Alternative splicing
KW-0209 Deafness
KW-0217 Developmental protein
KW-0225 Disease mutation
KW-0238 DNA-binding
KW-0371 Homeobox
KW-0539 Nucleus
KW-0892 Osteogenesis
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0804 Transcription
KW-0805 Transcription regulation

Interpro

InterPro ID InterPro Term
IPR022135 Distal-less_N
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR020479 Homeobox_metazoa
IPR000047 HTH_motif

PROSITE

PROSITE ID PROSITE Term
PS00027 HOMEOBOX_1
PS50071 HOMEOBOX_2

Pfam

Pfam ID Pfam Term
PF12413 DLL_N
PF00046 Homeodomain

Protein-protein interaction

Protein-miRNA interaction