Gene: GTF2I

Basic information

Tag Content
Uniprot ID P78347; O14743; O15359; O43546; O43588; O43589; Q75M85; Q75M86; Q75M87; Q75M88; Q86U51; Q9BSZ4;
Entrez ID 2969
Genbank protein ID EAW69598.1; AAS07461.1; AAB70791.1; AAC08312.1; AAS07464.1; AAB48826.1; AAH04472.1; AAS07460.1; AAC08314.1; AAC08315.1; CAA75163.1; AAC08313.1; AAP36118.1; AAS07463.1; AAH70484.1; AAS07462.1; AAL93085.1;
Genbank nucleotide ID NM_033000.3; NM_001518.4; NM_001280800.1; NM_032999.3; NM_033001.3; NM_001163636.2;
Ensembl protein ID ENSP00000482476; ENSP00000460070; ENSP00000404240; ENSP00000477837; ENSP00000484526;
Ensembl nucleotide ID ENSG00000263001
Gene name General transcription factor II-I
Gene symbol GTF2I
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Interacts with the basal transcription machinery by coordinating the formation of a multiprotein complex at the C-FOS promoter, and linking specific signal responsive activator complexes. Promotes the formation of stable high-order complexes of SRF and PHOX1 and interacts cooperatively with PHOX1 to promote serum-inducible transcription of a reporter gene deriven by the C-FOS serum response element (SRE). Acts as a coregulator for USF1 by binding independently two promoter elements, a pyrimidine-rich initiator (Inr) and an upstream E-box. Required for the formation of functional ARID3A DNA-binding complexes and for activation of immunoglobulin heavy-chain transcription upon B-lymphocyte activation.
Sequence
MAQVAMSTLP VEDEESSESR MVVTFLMSAL ESMCKELAKS KAEVACIAVY ETDVFVVGTE 60
RGRAFVNTRK DFQKDFVKYC VEEEEKAAEM HKMKSTTQAN RMSVDAVEIE TLRKTVEDYF 120
CFCYGKALGK STVVPVPYEK MLRDQSAVVV QGLPEGVAFK HPENYDLATL KWILENKAGI 180
SFIIKRPFLE PKKHVGGRVM VTDADRSILS PGGSCGPIKV KTEPTEDSGI SLEMAAVTVK 240
EESEDPDYYQ YNIQAGPSET DDVDEKQPLS KPLQGSHHSS EGNEGTEMEV PAEDSTQHVP 300
SETSEDPEVE VTIEDDDYSP PSKRPKANEL PQPPVPEPAN AGKRKVREFN FEKWNARITD 360
LRKQVEELFE RKYAQAIKAK GPVTIPYPLF QSHVEDLYVE GLPEGIPFRR PSTYGIPRLE 420
RILLAKERIR FVIKKHELLN STREDLQLDK PASGVKEEWY ARITKLRKMV DQLFCKKFAE 480
ALGSTEAKAV PYQKFEAHPN DLYVEGLPEN IPFRSPSWYG IPRLEKIIQV GNRIKFVIKR 540
PELLTHSTTE VTQPRTNTPV KEDWNVRITK LRKQVEEIFN LKFAQALGLT EAVKVPYPVF 600
ESNPEFLYVE GLPEGIPFRS PTWFGIPRLE RIVRGSNKIK FVVKKPELVI SYLPPGMASK 660
INTKALQSPK RPRSPGSNSK VPEIEVTVEG PNNNNPQTSA VRTPTQTNGS NVPFKPRGRE 720
FSFEAWNAKI TDLKQKVENL FNEKCGEALG LKQAVKVPFA LFESFPEDFY VEGLPEGVPF 780
RRPSTFGIPR LEKILRNKAK IKFIIKKPEM FETAIKESTS SKSPPRKINS SPNVNTTASG 840
VEDLNIIQVT IPDDDNERLS KVEKARQLRE QVNDLFSRKF GEAIGMGFPV KVPYRKITIN 900
PGCVVVDGMP PGVSFKAPSY LEISSMRRIL DSAEFIKFTV IRPFPGLVIN NQLVDQSESE 960
GPVIQESAEP SQLEVPATEE IKETDGSSQI KQEPDPTW 998

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGTF2I534669A7MB80Bos taurusPredictionMore>>
1:1 orthologGTF2I479714F6Y258Canis lupus familiarisPredictionMore>>
1:1 orthologGTF2I102190656A0A452DXC3Capra hircusPredictionMore>>
1:1 orthologGTF2I2969P78347Homo sapiensPredictionMore>>
1:1 orthologGtf2i14886Q9ESZ8CPOMus musculusPublicationMore>>
1:1 orthologGTF2I100513345F1RJL2Sus scrofaPredictionMore>>
1:1 orthologGtf2i353256A0A0G2K4T7Rattus norvegicusPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003677 DNA bindingIEA
GO:0003700 DNA-binding transcription factor activityIEA
GO:0005515 protein bindingIPI

GO:Biological Process

GO ID GO Term Evidence
GO:0006355 regulation of transcription, DNA-templatedIEA
GO:0006366 transcription by RNA polymerase IITAS
GO:0006367 transcription initiation from RNA polymerase II promoterTAS
GO:0007165 signal transductionTAS
GO:0016525 negative regulation of angiogenesisIDA
GO:0051481 negative regulation of cytosolic calcium ion concentrationIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005623 cellIEA
GO:0005634 nucleusIDA
GO:0005654 nucleoplasmIDA
GO:0005737 cytoplasmIEA
GO:0016020 membraneHDA

Reactome Pathway

Reactome ID Reactome Term Evidence

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0007 Acetylation
KW-0025 Alternative splicing
KW-0963 Cytoplasm
KW-0903 Direct protein sequencing
KW-0238 DNA-binding
KW-1017 Isopeptide bond
KW-0539 Nucleus
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0677 Repeat
KW-0804 Transcription
KW-0805 Transcription regulation
KW-0832 Ubl conjugation
KW-0856 Williams-Beuren syndrome

Interpro

InterPro ID InterPro Term
IPR004212 GTF2I
IPR036647 GTF2I-like_rpt_sf
IPR016659 TF_II-I

PROSITE

PROSITE ID PROSITE Term
PS51139 GTF2I

Pfam

Pfam ID Pfam Term
PF02946 GTF2I

Protein-protein interaction

Protein-miRNA interaction