Gene: Trappc10

Basic information

Tag Content
Uniprot ID Q3TLI0; Q811H4;
Entrez ID
Genbank protein ID BAE38812.1; AAH44902.1;
Genbank nucleotide ID
Ensembl protein ID
Ensembl nucleotide ID
Gene name Trafficking protein particle complex subunit 10
Gene symbol Trappc10
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage
Data sources Manually collected
Reference 25807483
Functional description May play a role in vesicular transport from endoplasmic reticulum to Golgi.
Sequence
MDAPEEPQPP VVYTMENKPI VTCAGDQNLF TSIYPTLSQQ LPREPMEWRR SYGRAPKMIH 60
LESNFVQFKE ELLPKEGNKA LLTFPFLHIY WTECCDTEVY KATVKDDLTK WQNVLKAHSS 120
VDWLIVVVEN DAKKKNKTNI LPRTSIVDKI RNDFCNKQSD RCVVLSDPLK DSSRTQESWN 180
AFLTKLRTLL LMSFTKNLGK FEDDMRTLRE KRTEPGWSFC EYFMVQEELA FVFEMLQQFE 240
DALVQYDELD ALFSQYVVNF GAGDGANWLT FFCQPVKSWN GLVLRKPIDM EKRELIQKQE 300
ATLLDLRSYL FSRQCTLLLF LQRPWEVAQR ALELLHSCVQ ELKLLEVSVP PGALDCWVFL 360
SCLEVLQRIE GCCDRAQIDS NIAHMVGLWS YAMEKLKSLG YLCGLVSEKG PNSEDLNRTV 420
DLLAGLGAER PETANTAQSP YKKLQEALSS VEAFEKHYLD LSHATIEMYT SIGRIRSAKL 480
VGKDLAEFYM RKRSPQKAEM YLQGALKNYL AEGWALPVTH TRKQLAECQK HLGQMENYLQ 540
TSSLLASDHH LTEEERKYFC QEILSFASQQ EDNPGHKVVL PMHSFARLKD LHFDPPNAVV 600
HAGGVLTVEI TVCSQMPIPV HVDQIAVNVH FSIEKNNYRK TAEWLTKHKT SNGIITFPAE 660
ASLFPASQNS LPALELSEML ERSPSDNSLN TTGIICRNVH MLLRRQESGS SLEPPSGLAL 720
EDGAHVLRCS SVTLQPGANK IAFKTQAKEP GTYTLRQLRA SVGPVWFVLA HIHPIVQYDV 780
YSQEPQLHVE PLADSLLAGI PQKVKFTVTT GHYTVKNGDS LQLSNVEAML ILCQAENRAV 840
VYSNSREECS TALLRIQSSD KVTSIGLPTA PAYHVIEFEL EVLSLPSAPA SGGDTSVPGT 900
PELHRKQKDS QRAGHCMVTT DHKVSIDCPW SIYSTVIALT FSVPFRTEHS LLSAGTRKYV 960
QVCVQNLSEL DFELSDSNLE DKGHATDLRL APLNTQSQQL IHSKQSVFFV WELTWTQEPP 1020
PPLHCQFSVG FSPASEEQLT VSLKPYTYEF QVENFFTLYS VRAEILPASG AEYCKTGSLC 1080
SLEVSITRLA DLLDVDKDEA LVESEDYFST KLMYEVVDNS SNWAVCGKSC GVIAMPLAAQ 1140
ATHRVHMEVM PLFAGYLPLP DVRLFKYLPH HSAHASQLDA DSWIENDSLS VDKHLDDQLD 1200
CSSLRSRGST HSTSSSEHKG LPMPRLQALP AGQVFNSSTG MQVLVIPSQD DHVLEVSVT 1259

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003674 molecular_functionND

GO:Biological Process

GO ID GO Term Evidence
GO:0006891 intra-Golgi vesicle-mediated transportIBA
GO:0034498 early endosome to Golgi transportIBA
GO:0051259 protein complex oligomerizationISO

GO:Cellular Component

GO ID GO Term Evidence
GO:0005829 cytosolIEA
GO:0030008 TRAPP complexISO
GO:1990071 TRAPPII protein complexIBA

Reactome Pathway

Reactome ID Reactome Term Evidence

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0931 ER-Golgi transport
KW-0333 Golgi apparatus
KW-0597 Phosphoprotein
KW-1185 Reference proteome
KW-0813 Transport

Interpro

InterPro ID InterPro Term
IPR022233 TRAPP_II_complex_TRAPPC10

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF12584 TRAPPC10

Protein-miRNA interaction