Gene: Lgr6

Basic information

Tag Content
Uniprot ID Q3UVD5; B2RUL8; Q80UB8; Q8R301;
Entrez ID 329252
Genbank protein ID AAO85074.1; BAE23335.1; AAI41211.1; AAH26896.1;
Genbank nucleotide ID NM_001033409.3
Ensembl protein ID ENSMUSP00000035444
Ensembl nucleotide ID ENSMUSG00000042793
Gene name Leucine-rich repeat-containing G-protein coupled receptor 6
Gene symbol Lgr6
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage
Data sources Manually collected
Reference 29769720
Functional description Receptor for R-spondins that potentiates the canonical Wnt signaling pathway and acts as a marker of multipotent stem cells in the epidermis. Upon binding to R-spondins (RSPO1, RSPO2, RSPO3 or RSPO4), associates with phosphorylated LRP6 and frizzled receptors that are activated by extracellular Wnt receptors, triggering the canonical Wnt signaling pathway to increase expression of target genes. In contrast to classical G-protein coupled receptors, does not activate heterotrimeric G-proteins to transduce the signal (By similarity).
Sequence
MHSPPGLLAL WLCAVLCASA RAGSDPQPGP GRPACPAPCH CQEDGIMLSA DCSELGLSVV 60
PADLDPLTAY LDLSMNNLTE LQPGLFHHLR FLEELRLSGN HLSHIPGQAF SGLHSLKILM 120
LQSNQLRGIP AEALWELPSL QSLRLDANLI SLVPERSFEG LSSLRHLWLD DNALTEIPVR 180
ALNNLPALQA MTLALNHIRH IPDYAFQNLT SLVVLHLHNN RIQHVGTHSF EGLHNLETLD 240
LNYNELQEFP LAIRTLGRLQ ELGFHNNNIK AIPEKAFMGS PLLQTIHFYD NPIQFVGRSA 300
FQYLSKLHTL SLNGATDIQE FPDLKGTTSL EILTLTRAGI RLLPPGVCQQ LPRLRILELS 360
HNQIEELPSL HRCQKLEEIG LRHNRIKEIG ADTFSQLGSL QALDLSWNAI RAIHPEAFST 420
LRSLVKLDLT DNQLTTLPLA GLGGLMHLKL KGNLALSQAF SKDSFPKLRI LEVPYAYQCC 480
AYGICASFFK TSGQWQAEDF HPEEEEAPKR PLGLLAGQAE NHYDLDLDEL QMGTEDSKPH 540
PSVQCSPVPG PFKPCEHLFE SWGIRLAVWA IVLLSVLCNG LVLLTVFASG PSPLSPVKLV 600
VGAMAGANAL SGISCGLLAS VDALTYGQFA EYGARWESGL GCQATGFLAV LGSEASVLLL 660
TLAAVQCSIS VTCVRAYGKA PSPGSVRAGA LGCLALAGLA AALPLASVGE YGASPLCLPY 720
APPEGRPAAL GFAVALVMMN SLCFLVVAGA YIKLYCDLPR GDFEAVWDCA MVRHVAWLIF 780
ADGLLYCPVA FLSFASMLGL FPVTPEAVKS VLLVVLPLPA CLNPLLYLLF NPHFRDDLRR 840
LWPSPRSPGP LAYAAAGELE KSSCDSTQAL VAFSDVDLIL EASEAGQPPG LETYGFPSVT 900
LISRHQPGAT RLEGNHFVES DGTKFGNPQP PMKGELLLKA EGATLAGCGS SVGGALWPSG 960
SLFASHL 967

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003674 molecular_functionND
GO:0004930 G protein-coupled receptor activityIEA
GO:0016500 protein-hormone receptor activityIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0007186 G protein-coupled receptor signaling pathwayIEA
GO:0016055 Wnt signaling pathwayIEA
GO:0030177 positive regulation of Wnt signaling pathwayISO
GO:0030335 positive regulation of cell migrationISO
GO:0042246 tissue regenerationIMP
GO:1990523 bone regenerationIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0005615 extracellular spaceIBA
GO:0005886 plasma membraneIEA
GO:0016021 integral component of membraneIEA
GO:0031012 extracellular matrixIBA
GO:0031982 vesicleISO

Reactome Pathway

Reactome ID Reactome Term Evidence

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1003 Cell membrane
KW-1015 Disulfide bond
KW-0297 G-protein coupled receptor
KW-0325 Glycoprotein
KW-0433 Leucine-rich repeat
KW-0472 Membrane
KW-0675 Receptor
KW-1185 Reference proteome
KW-0677 Repeat
KW-0732 Signal
KW-0807 Transducer
KW-0812 Transmembrane
KW-1133 Transmembrane helix
KW-0879 Wnt signaling pathway

Interpro

InterPro ID InterPro Term
IPR000276 GPCR_Rhodpsn
IPR002131 Gphrmn_rcpt_fam
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR000372 LRRNT

PROSITE

PROSITE ID PROSITE Term
PS51450 LRR

Pfam

Pfam ID Pfam Term
PF13855 LRR_8

Protein-miRNA interaction