Gene: CDON

Basic information

Tag Content
Uniprot ID Q4KMG0; O14631;
Entrez ID 50937
Genbank protein ID AAC34901.2; AAH98583.1;
Genbank nucleotide ID XM_011542862.2; XM_011542864.2; XM_011542863.2; XM_017017873.1; NM_001243597.1; XM_011542865.2; XM_011542866.2; NM_016952.4;
Ensembl protein ID ENSP00000263577; ENSP00000376458;
Ensembl nucleotide ID ENSG00000064309
Gene name Cell adhesion molecule-related/down-regulated by oncogenes
Gene symbol CDON
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Component of a cell-surface receptor complex that mediates cell-cell interactions between muscle precursor cells. Promotes differentiation of myogenic cells (By similarity).
Sequence
MHPDLGPLCT LLYVTLTILC SSVSSDLAPY FTSEPLSAVQ KLGGPVVLHC SAQPVTTRIS 60
WLHNGKTLDG NLEHVKIHQG TLTILSLNSS LLGYYQCLAN NSIGAIVSGP ATVSVAVLGD 120
FGSSTKHVIT AEEKSAGFIG CRVPESNPKA EVRYKIRGKW LEHSTENYLI LPSGNLQILN 180
VSLEDKGSYK CAAYNPVTHQ LKVEPIGRKL LVSRPSSDDV HILHPTHSQA LAVLSRSPVT 240
LECVVSGVPA PQVYWLKDGQ DIAPGSNWRR LYSHLATDSV DPADSGNYSC MAGNKSGDVK 300
YVTYMVNVLE HASISKGLQD QIVSLGATVH FTCDVHGNPA PNCTWFHNAQ PIHPSARHLT 360
AGNGLKISGV TVEDVGMYQC VADNGIGFMH STGRLEIEND GGFKPVIITA PVSAKVADGD 420
FVTLSCNASG LPVPVIRWYD SHGLITSHPS QVLRSKSRKS QLSRPEGLNL EPVYFVLSQA 480
GASSLHIQAV TQEHAGKYIC EAANEHGTTQ AEASLMVVPF ETNTKAETVT LPDAAQNDDR 540
SKRDGSETGL LSSFPVKVHP SAVESAPEKN ASGISVPDAP IILSPPQTHT PDTYNLVWRA 600
GKDGGLPINA YFVKYRKLDD GVGMLGSWHT VRVPGSENEL HLAELEPSSL YEVLMVARSA 660
AGEGQPAMLT FRTSKEKTAS SKNTQASSPP VGIPKYPVVS EAANNNFGVV LTDSSRHSGV 720
PEAPDRPTIS TASETSVYVT WIPRANGGSP ITAFKVEYKR MRTSNWLVAA EDIPPSKLSV 780
EVRSLEPGST YKFRVIAINH YGESFRSSAS RPYQVVGFPN RFSSRPITGP HIAYTEAVSD 840
TQIMLKWTYI PSSNNNTPIQ GFYIYYRPTD SDNDSDYKRD VVEGSKQWHM IGHLQPETSY 900
DIKMQCFNEG GESEFSNVMI CETKVKRVPG ASEYPVKDLS TPPNSLGSGG NVGPATSPAR 960
SSDMLYLIVG CVLGVMVLIL MVFIAMCLWK NRQQNTIQKY DPPGYLYQGS DMNGQMVDYT 1020
TLSGASQING NVHGGFLTNG GLSSGYSHLH HKVPNAVNGI VNGSLNGGLY SGHSNSLTRT 1080
HVDFEHPHHL VNGGGMYTAV PQIDPLECVN CRNCRNNNRC FTKTNSTFSS SPPPVVPVVA 1140
PYPQDGLEMK PLSHVKVPVC LTSAVPDCGQ LPEESVKDNV EPVPTQRTCC QDIVNDVSSD 1200
GSEDPAEFSR GQEGMINLRI PDHLQLAKSC VWEGDSCAHS ETEINIVSWN ALILPPVPEG 1260
CAEKTMWSPP GIPLDSPTEV LQQPRET 1287

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database


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Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologCDON536011E1BHG3Bos taurusPredictionMore>>
1:1 orthologCDON102188923A0A452DT38Capra hircusPredictionMore>>
1:1 orthologCDON50937Q4KMG0Homo sapiensPredictionMore>>
1:1 orthologCdon57810Q32MD9CPOMus musculusPublicationMore>>
1:1 orthologCDON451650H2Q530Pan troglodytesPredictionMore>>
1:1 orthologCDONI3LGV0Sus scrofaPredictionMore>>
1:1 orthologCDONG1T3Q0Oryctolagus cuniculusPredictionMore>>
1:1 orthologCdon50938G3V7K7Rattus norvegicusPredictionMore>>
1:1 orthologcdon280652Q1L8D0Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0005515 protein bindingIPI

GO:Biological Process

GO ID GO Term Evidence
GO:0001708 cell fate specificationIEA
GO:0002088 lens development in camera-type eyeIEA
GO:0007155 cell adhesionTAS
GO:0007224 smoothened signaling pathwayIEA
GO:0007520 myoblast fusionIEA
GO:0009952 anterior/posterior pattern specificationIEA
GO:0010172 embryonic body morphogenesisIEA
GO:0014816 skeletal muscle satellite cell differentiationIEA
GO:0021987 cerebral cortex developmentIEA
GO:0043393 regulation of protein bindingIEA
GO:0043410 positive regulation of MAPK cascadeIEA
GO:0045663 positive regulation of myoblast differentiationIEA
GO:0045666 positive regulation of neuron differentiationIEA
GO:0045944 positive regulation of transcription by RNA polymerase IIIEA
GO:0048643 positive regulation of skeletal muscle tissue developmentIEA
GO:0051057 positive regulation of small GTPase mediated signal transductionIEA
GO:0051149 positive regulation of muscle cell differentiationTAS
GO:0060059 embryonic retina morphogenesis in camera-type eyeIEA
GO:2000179 positive regulation of neural precursor cell proliferationIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005886 plasma membraneTAS
GO:0005887 integral component of plasma membraneIEA
GO:0062023 collagen-containing extracellular matrixTAS

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-1266738 Developmental BiologyIEA
R-HSA-1266738 Developmental BiologyTAS
R-HSA-162582 Signal TransductionTAS
R-HSA-525793 MyogenesisIEA
R-HSA-525793 MyogenesisTAS
R-HSA-5358351 Signaling by HedgehogTAS
R-HSA-5632681 Ligand-receptor interactionsTAS
R-HSA-5632684 Hedgehog 'on' stateTAS
R-HSA-5635838 Activation of SMOTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0025 Alternative splicing
KW-1003 Cell membrane
KW-0225 Disease mutation
KW-1015 Disulfide bond
KW-0325 Glycoprotein
KW-0370 Holoprosencephaly
KW-0393 Immunoglobulin domain
KW-0472 Membrane
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0677 Repeat
KW-0732 Signal
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR032983 CDO
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2

PROSITE

PROSITE ID PROSITE Term
PS50853 FN3
PS50835 IG_LIKE

Pfam

Pfam ID Pfam Term
PF00041 fn3
PF07679 I-set

Protein-protein interaction

Protein-miRNA interaction