Gene: Chuk

Basic information

Tag Content
Uniprot ID Q60680; Q80VU2; Q9D2X3;
Entrez ID
Genbank protein ID AAH18243.1; AAC52589.1; BAB31335.1;
Genbank nucleotide ID
Ensembl protein ID
Ensembl nucleotide ID
Gene name Inhibitor of nuclear factor kappa-B kinase subunit alpha
Gene symbol Chuk
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage
Data sources Manually collected
Reference 17351639; 10346820; 10195896;
Functional description Serine kinase that plays an essential role in the NF-kappa-B signaling pathway which is activated by multiple stimuli such as inflammatory cytokines, bacterial or viral products, DNA damages or other cellular stresses. Acts as part of the canonical IKK complex in the conventional pathway of NF-kappa-B activation and phosphorylates inhibitors of NF-kappa-B on serine residues. These modifications allow polyubiquitination of the inhibitors and subsequent degradation by the proteasome. In turn, free NF-kappa-B is translocated into the nucleus and activates the transcription of hundreds of genes involved in immune response, growth control, or protection against apoptosis. Negatively regulates the pathway by phosphorylating the scaffold protein TAXBP1 and thus promoting the assembly of the A20/TNFAIP3 ubiquitin-editing complex (composed of A20/TNFAIP3, TAX1BP1, and the E3 ligases ITCH and RNF11). Therefore, CHUK plays a key role in the negative feedback of NF-kappa-B canonical signaling to limit inflammatory gene activation. As part of the non-canonical pathway of NF-kappa-B activation, the MAP3K14-activated CHUK/IKKA homodimer phosphorylates NFKB2/p100 associated with RelB, inducing its proteolytic processing to NFKB2/p52 and the formation of NF-kappa-B RelB-p52 complexes. In turn, these complexes regulate genes encoding molecules involved in B-cell survival and lymphoid organogenesis. Participates also in the negative feedback of the non-canonical NF-kappa-B signaling pathway by phosphorylating and destabilizing MAP3K14/NIK. Within the nucleus, phosphorylates CREBBP and consequently increases both its transcriptional and histone acetyltransferase activities. Modulates chromatin accessibility at NF-kappa-B-responsive promoters by phosphorylating histones H3 at 'Ser-10' that are subsequently acetylated at 'Lys-14' by CREBBP. Additionally, phosphorylates the CREBBP-interacting protein NCOA3. Also phosphorylates FOXO3 and may regulate this pro-apoptotic transcription factor. Phosphorylates RIPK1 at 'Ser-25' which represses its kinase activity and consequently prevents TNF-mediated RIPK1-dependent cell death (PubMed:30988283).
Sequence
MERPPGLRPG AGGPWEMRER LGTGGFGNVS LYQHRELDLK IAIKSCRLEL SSKNRERWCH 60
EIQIMKKLDH ANVVKACDVP EELNFLINDV PLLAMEYCSG GDLRKLLNKP ENCCGLKESQ 120
ILSLLSDIGS GIRYLHENKI IHRDLKPENI VLQDVGGKTI HKIIDLGYAK DVDQGSLCTS 180
FVGTLQYLAP ELFENKPYTA TVDYWSFGTM VFECIAGYRP FLHHLQPFTW HEKIKKKDPK 240
CIFACEEMTG EVRFSSHLPQ PNSLCSLIVE PMESWLQLML NWDPQQRGGP IDLTLKQPRC 300
FALMDHILNL KIVHILNMTS AKIISFLLPC DESLHSLQSR IERETGINTG SQELLSETGI 360
SLDPRKPASQ CVLDGVRGCD SYMVYLFDKS KTVYEGPFAS RSLSDCVNYI VQDSKIQLPI 420
IQLRKVWAEA VHYVSGLKED YSRLFQGQRA AMLSLLRYNA NLTKMKNTLI SASQQLKAKL 480
EFFRKSIQLD LERYSEQMTY GISSEKMLKA WKEMEEKAIH YSEVGVIGYL EDQIMSLHTE 540
IMELQKSPYG RRQGDLMESL EQRAIDLYKQ LKHRPPDHLY SDSTEMVKII VHTVQSQDRV 600
LKELFGHLSK LLGCKQKIID LLPKVEVALS NIKEADNTVM FMQGKRQKEI WHLLKIACTQ 660
SSARSLVGSS LEGTVTPPVS AWLPPTLADR EHPLTCVVTP QDGETLAQMI EENLNCLGHL 720
STIIREANED QSSSLMSLDW SWLAE 745

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0004672 protein kinase activityISS
GO:0004672 protein kinase activityISO
GO:0004672 protein kinase activityIDA
GO:0004674 protein serine/threonine kinase activityIBA
GO:0005515 protein bindingIPI
GO:0005524 ATP bindingIEA
GO:0042803 protein homodimerization activityISS
GO:0042803 protein homodimerization activityISO
GO:0044877 protein-containing complex bindingISO
GO:0046982 protein heterodimerization activityISS
GO:0046982 protein heterodimerization activityISO
GO:0097110 scaffold protein bindingISO
GO:0008384 IkappaB kinase activityISO
GO:0008384 IkappaB kinase activityIBA

GO:Biological Process

GO ID GO Term Evidence
GO:0002011 morphogenesis of an epithelial sheetIMP
GO:0006468 protein phosphorylationISO
GO:0006468 protein phosphorylationIDA
GO:0007249 I-kappaB kinase/NF-kappaB signalingISO
GO:0007252 I-kappaB phosphorylationTAS
GO:0007266 Rho protein signal transductionISO
GO:0007595 lactationIGI
GO:0007595 lactationIMP
GO:0010033 response to organic substanceISO
GO:0018105 peptidyl-serine phosphorylationIBA
GO:0030316 osteoclast differentiationIGI
GO:0030316 osteoclast differentiationIMP
GO:0032088 negative regulation of NF-kappaB transcription factor activityISO
GO:0032496 response to lipopolysaccharideISO
GO:0033209 tumor necrosis factor-mediated signaling pathwayIBA
GO:0033598 mammary gland epithelial cell proliferationIGI
GO:0033598 mammary gland epithelial cell proliferationIMP
GO:0034614 cellular response to reactive oxygen speciesISO
GO:0035994 response to muscle stretchIMP
GO:0038061 NIK/NF-kappaB signalingISO
GO:0042475 odontogenesis of dentin-containing toothIMP
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signalingISO
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signalingIGI
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signalingIMP
GO:0045893 positive regulation of transcription, DNA-templatedISO
GO:0045944 positive regulation of transcription by RNA polymerase IIISS
GO:0045944 positive regulation of transcription by RNA polymerase IIISO
GO:0045944 positive regulation of transcription by RNA polymerase IIIBA
GO:0051092 positive regulation of NF-kappaB transcription factor activityIBA
GO:0051146 striated muscle cell differentiationISO
GO:0051607 defense response to virusIMP
GO:0060749 mammary gland alveolus developmentIGI
GO:0060749 mammary gland alveolus developmentIMP
GO:0061847 response to cholecystokininISO
GO:0071276 cellular response to cadmium ionISO
GO:0071356 cellular response to tumor necrosis factorISS
GO:0071356 cellular response to tumor necrosis factorISO
GO:0098586 cellular response to virusISO
GO:0098586 cellular response to virusIMP
GO:1902741 positive regulation of interferon-alpha secretionISO
GO:1902741 positive regulation of interferon-alpha secretionIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0005654 nucleoplasmISO
GO:0005737 cytoplasmISO
GO:0005737 cytoplasmIBA
GO:0005737 cytoplasmTAS
GO:0005829 cytosolISO
GO:0008385 IkappaB kinase complexISO
GO:0008385 IkappaB kinase complexIBA
GO:0009898 cytoplasmic side of plasma membraneIDA
GO:0035631 CD40 receptor complexIDA
GO:0043231 intracellular membrane-bounded organelleISO

Reactome Pathway

Reactome ID Reactome Term Evidence

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0067 ATP-binding
KW-0963 Cytoplasm
KW-0418 Kinase
KW-0547 Nucleotide-binding
KW-0539 Nucleus
KW-0597 Phosphoprotein
KW-1185 Reference proteome
KW-0723 Serine/threonine-protein kinase
KW-0808 Transferase

Interpro

InterPro ID InterPro Term
IPR041185 IKBKB_SDD
IPR022007 IKKbetaNEMObind
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR008271 Ser/Thr_kinase_AS

PROSITE

PROSITE ID PROSITE Term
PS00107 PROTEIN_KINASE_ATP
PS50011 PROTEIN_KINASE_DOM
PS00108 PROTEIN_KINASE_ST

Pfam

Pfam ID Pfam Term
PF18397 IKBKB_SDD
PF12179 IKKbetaNEMObind
PF00069 Pkinase

Protein-miRNA interaction