Gene: Rab34

Basic information

Tag Content
Uniprot ID Q64008; Q8BHJ0; Q99P59; Q99P90;
Entrez ID 19376
Genbank protein ID AAH38638.1; AAK09398.1; BAC16803.1; AAK11241.1; AAB20669.1;
Genbank nucleotide ID NM_001159482.1; NM_033475.3;
Ensembl protein ID
Ensembl nucleotide ID
Gene name Ras-related protein Rab-34
Gene symbol Rab34
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage
Data sources Manually collected
Reference 27626380
Functional description Transport protein involved in the redistribution of lysosomes to the peri-Golgi region (PubMed:12475955). Plays a role in the maturation of phagosomes that engulf pathogens, such as S.aureus and M.tuberculosis (By similarity). Plays a role in the fusion of phagosomes with lysosomes (By similarity). Acts also as a positive regulator of hedgehog signaling and regulates ciliary function (PubMed:29290584).
Sequence
MNILAPVRRD RVLAELPQCL KKEAALHVRK DFHPRVTCAC QEHRTGTVGF KISKVIVVGD 60
LSVGKTCLIN RFCKDTFDKN YKATIGVDFE MERFEVLGVP FSLQLWDTAG QERFKCIAST 120
YYRGAQAIII VFNLNDVASL EHTKQWLTDA LKENDPSNVL LFLVGSKKDL STPAQYSLME 180
KDALKVAQEI KAEYWAVSSL TGENVREFFF RVAALTFEAN VLADVEKSGA RHIADVVRIN 240
SDDKNLYLTA SKKKATCCP 259

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003924 GTPase activityIDA
GO:0003924 GTPase activityIBA
GO:0005515 protein bindingIPI
GO:0005525 GTP bindingIEA
GO:0017160 Ral GTPase bindingISO
GO:0019001 guanyl nucleotide bindingIDA
GO:0030742 GTP-dependent protein bindingISO

GO:Biological Process

GO ID GO Term Evidence
GO:0006886 intracellular protein transportIBA
GO:0006897 endocytosisIDA
GO:0006897 endocytosisIBA
GO:0007041 lysosomal transportIDA
GO:0019882 antigen processing and presentationISO
GO:0030030 cell projection organizationIEA
GO:0032418 lysosome localizationISO
GO:0032482 Rab protein signal transductionIBA
GO:0043001 Golgi to plasma membrane protein transportISO
GO:0043001 Golgi to plasma membrane protein transportIGI
GO:0045880 positive regulation of smoothened signaling pathwayIMP
GO:0050714 positive regulation of protein secretionISO
GO:0071333 cellular response to glucose stimulusISO
GO:0072659 protein localization to plasma membraneISO
GO:0090382 phagosome maturationISS
GO:0090382 phagosome maturationISO
GO:0090385 phagosome-lysosome fusionISS
GO:0090385 phagosome-lysosome fusionISO
GO:0090385 phagosome-lysosome fusionIBA
GO:0090385 phagosome-lysosome fusionIMP
GO:1900426 positive regulation of defense response to bacteriumIDA
GO:1905171 positive regulation of protein localization to phagocytic vesicleIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0001726 ruffleIDA
GO:0005623 cellIEA
GO:0005769 early endosomeIDA
GO:0005770 late endosomeIDA
GO:0005794 Golgi apparatusISO
GO:0005794 Golgi apparatusIDA
GO:0005795 Golgi stackISO
GO:0005929 ciliumIEA
GO:0012505 endomembrane systemIBA
GO:0030670 phagocytic vesicle membraneIEA
GO:0031410 cytoplasmic vesicleIDA
GO:0031982 vesicleISO
GO:0031985 Golgi cisternaISO
GO:0045335 phagocytic vesicleISS
GO:0045335 phagocytic vesicleISO
GO:0048471 perinuclear region of cytoplasmISO
GO:0045335 phagocytic vesicleIDA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-MMU-392499 Metabolism of proteinsIEA
R-MMU-597592 Post-translational protein modificationIEA
R-MMU-8873719 RAB geranylgeranylationIEA

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0007 Acetylation
KW-0966 Cell projection
KW-0970 Cilium biogenesis/degradation
KW-0963 Cytoplasm
KW-0968 Cytoplasmic vesicle
KW-0333 Golgi apparatus
KW-0342 GTP-binding
KW-0449 Lipoprotein
KW-0472 Membrane
KW-0547 Nucleotide-binding
KW-0597 Phosphoprotein
KW-0636 Prenylation
KW-0653 Protein transport
KW-1185 Reference proteome
KW-0813 Transport

Interpro

InterPro ID InterPro Term
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase

PROSITE

PROSITE ID PROSITE Term
PS51419 RAB

Pfam

Pfam ID Pfam Term
PF00071 Ras

Protein-protein interaction

Protein-miRNA interaction