Gene: Tgfbr1

Basic information

Tag Content
Uniprot ID Q64729; A2AJN0;
Entrez ID 21812
Genbank protein ID BAA05878.1; BAA05023.1; AAH63260.1;
Genbank nucleotide ID NM_001312868.1; NM_001312869.1; NM_009370.3;
Ensembl protein ID ENSMUSP00000048501; ENSMUSP00000007757;
Ensembl nucleotide ID ENSMUSG00000007613
Gene name TGF-beta receptor type-1
Gene symbol Tgfbr1
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO,CLP,CLO
Developmental stage E14.0
Data sources Manually collected
Reference 18586087; 16806156;
Functional description Transmembrane serine/threonine kinase forming with the TGF-beta type II serine/threonine kinase receptor, TGFBR2, the non-promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinogenesis. The formation of the receptor complex composed of 2 TGFBR1 and 2 TGFBR2 molecules symmetrically bound to the cytokine dimer results in the phosphorylation and the activation of TGFBR1 by the constitutively active TGFBR2. Activated TGFBR1 phosphorylates SMAD2 which dissociates from the receptor and interacts with SMAD4. The SMAD2-SMAD4 complex is subsequently translocated to the nucleus where it modulates the transcription of the TGF-beta-regulated genes. This constitutes the canonical SMAD-dependent TGF-beta signaling cascade. Also involved in non-canonical, SMAD-independent TGF-beta signaling pathways. For instance, TGFBR1 induces TRAF6 autoubiquitination which in turn results in MAP3K7 ubiquitination and activation to trigger apoptosis. Also regulates epithelial to mesenchymal transition through a SMAD-independent signaling pathway through PARD6A phosphorylation and activation (By similarity).
Sequence
MEAAAAAPRR PQLLIVLVAA ATLLPGAKAL QCFCHLCTKD NFTCETDGLC FVSVTETTDK 60
VIHNSMCIAE IDLIPRDRPF VCAPSSKTGA VTTTYCCNQD HCNKIELPTT GPFSEKQSAG 120
LGPVELAAVI AGPVCFVCIA LMLMVYICHN RTVIHHRVPN EEDPSLDRPF ISEGTTLKDL 180
IYDMTTSGSG SGLPLLVQRT IARTIVLQES IGKGRFGEVW RGKWRGEEVA VKIFSSREER 240
SWFREAEIYQ TVMLRHENIL GFIAADNKDN GTWTQLWLVS DYHEHGSLFD YLNRYTVTVE 300
GMIKLALSTA SGLAHLHMEI VGTQGKPAIA HRDLKSKNIL VKKNGTCCIA DLGLAVRHDS 360
ATDTIDIAPN HRVGTKRYMA PEVLDDSINM KHFESFKRAD IYAMGLVFWE IARRCSIGGI 420
HEDYQLPYYD LVPSDPSVEE MRKVVCEQKL RPNIPNRWQS CEALRVMAKI MRECWYANGA 480
ARLTALRIKK TLSQLSQQEG IKM 503

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression during embryonic days (E11.5~E18.5) ~ adult days (Ps) in the lip and palate tissues. (X-axis: days, Y-axis: tissues)

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Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0004672 protein kinase activityISO
GO:0004674 protein serine/threonine kinase activityISO
GO:0004674 protein serine/threonine kinase activityIBA
GO:0005024 transforming growth factor beta-activated receptor activityISO
GO:0005024 transforming growth factor beta-activated receptor activityIDA
GO:0005024 transforming growth factor beta-activated receptor activityIGI
GO:0005025 transforming growth factor beta receptor activity, type IISS
GO:0005025 transforming growth factor beta receptor activity, type IISO
GO:0005025 transforming growth factor beta receptor activity, type IIBA
GO:0005102 signaling receptor bindingIPI
GO:0005114 type II transforming growth factor beta receptor bindingISO
GO:0005515 protein bindingIPI
GO:0005524 ATP bindingISO
GO:0016361 activin receptor activity, type IIBA
GO:0031625 ubiquitin protein ligase bindingISO
GO:0044877 protein-containing complex bindingISO
GO:0046332 SMAD bindingISO
GO:0046332 SMAD bindingIDA
GO:0046332 SMAD bindingIBA
GO:0046872 metal ion bindingIEA
GO:0048185 activin bindingIBA
GO:0050431 transforming growth factor beta bindingISO
GO:0050431 transforming growth factor beta bindingIPI
GO:0070411 I-SMAD bindingISO
GO:0019838 growth factor bindingISO

GO:Biological Process

GO ID GO Term Evidence
GO:0000186 activation of MAPKK activityISO
GO:0001501 skeletal system developmentIGI
GO:0001525 angiogenesisIMP
GO:0001701 in utero embryonic developmentIMP
GO:0001822 kidney developmentIGI
GO:0001824 blastocyst developmentIDA
GO:0001837 epithelial to mesenchymal transitionISO
GO:0001937 negative regulation of endothelial cell proliferationIGI
GO:0001938 positive regulation of endothelial cell proliferationISS
GO:0002088 lens development in camera-type eyeIMP
GO:0003222 ventricular trabecula myocardium morphogenesisIMP
GO:0003223 ventricular compact myocardium morphogenesisIMP
GO:0006355 regulation of transcription, DNA-templatedISO
GO:0006468 protein phosphorylationISO
GO:0006468 protein phosphorylationIBA
GO:0006915 apoptotic processIEA
GO:0007165 signal transductionISO
GO:0007179 transforming growth factor beta receptor signaling pathwayISO
GO:0007179 transforming growth factor beta receptor signaling pathwayIMP
GO:0007179 transforming growth factor beta receptor signaling pathwayIDA
GO:0007179 transforming growth factor beta receptor signaling pathwayIGI
GO:0007179 transforming growth factor beta receptor signaling pathwayIBA
GO:0007399 nervous system developmentIBA
GO:0007507 heart developmentISS
GO:0007507 heart developmentIMP
GO:0007507 heart developmentIBA
GO:0008284 positive regulation of cell population proliferationISO
GO:0008354 germ cell migrationIMP
GO:0008584 male gonad developmentIMP
GO:0009791 post-embryonic developmentIMP
GO:0009952 anterior/posterior pattern specificationIGI
GO:0010468 regulation of gene expressionISS
GO:0010468 regulation of gene expressionIMP
GO:0010628 positive regulation of gene expressionISS
GO:0010628 positive regulation of gene expressionISO
GO:0010717 regulation of epithelial to mesenchymal transitionISS
GO:0010718 positive regulation of epithelial to mesenchymal transitionIGI
GO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylationISO
GO:0018105 peptidyl-serine phosphorylationISO
GO:0018107 peptidyl-threonine phosphorylationISO
GO:0030199 collagen fibril organizationIMP
GO:0030307 positive regulation of cell growthISO
GO:0030335 positive regulation of cell migrationISO
GO:0031396 regulation of protein ubiquitinationISO
GO:0032331 negative regulation of chondrocyte differentiationIMP
GO:0032924 activin receptor signaling pathwayISS
GO:0032924 activin receptor signaling pathwayIBA
GO:0035556 intracellular signal transductionISS
GO:0042118 endothelial cell activationISS
GO:0043065 positive regulation of apoptotic processIDA
GO:0043066 negative regulation of apoptotic processIMP
GO:0043393 regulation of protein bindingIMP
GO:0043542 endothelial cell migrationIMP
GO:0043627 response to estrogenISO
GO:0045602 negative regulation of endothelial cell differentiationISO
GO:0045893 positive regulation of transcription, DNA-templatedISS
GO:0045893 positive regulation of transcription, DNA-templatedISO
GO:0046777 protein autophosphorylationISO
GO:0048538 thymus developmentIMP
GO:0048663 neuron fate commitmentIMP
GO:0048701 embryonic cranial skeleton morphogenesisIMP
GO:0048705 skeletal system morphogenesisIGI
GO:0048762 mesenchymal cell differentiationISS
GO:0048844 artery morphogenesisIMP
GO:0048870 cell motilityISO
GO:0051272 positive regulation of cellular component movementISO
GO:0051491 positive regulation of filopodium assemblyIMP
GO:0051496 positive regulation of stress fiber assemblyIGI
GO:0051897 positive regulation of protein kinase B signalingISO
GO:0060017 parathyroid gland developmentIMP
GO:0060021 roof of mouth developmentIMP
GO:0060021 roof of mouth developmentIGI
GO:0060037 pharyngeal system developmentIMP
GO:0060043 regulation of cardiac muscle cell proliferationIMP
GO:0060317 cardiac epithelial to mesenchymal transitionISS
GO:0060389 pathway-restricted SMAD protein phosphorylationISO
GO:0060391 positive regulation of SMAD protein signal transductionISO
GO:0060412 ventricular septum morphogenesisIMP
GO:0060978 angiogenesis involved in coronary vascular morphogenesisIMP
GO:0060982 coronary artery morphogenesisIMP
GO:0070723 response to cholesterolISO
GO:0070723 response to cholesterolIDA
GO:0071363 cellular response to growth factor stimulusIBA
GO:0071560 cellular response to transforming growth factor beta stimulusISO
GO:0071560 cellular response to transforming growth factor beta stimulusIDA
GO:1902894 negative regulation of pri-miRNA transcription by RNA polymerase IIISO
GO:1902895 positive regulation of pri-miRNA transcription by RNA polymerase IIISO
GO:1905007 positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formationIMP
GO:1905075 positive regulation of tight junction disassemblyIGI
GO:1905223 epicardium morphogenesisIMP
GO:2001235 positive regulation of apoptotic signaling pathwayISO
GO:2001237 negative regulation of extrinsic apoptotic signaling pathwayISO
GO:0003342 proepicardium developmentIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0005634 nucleusISS
GO:0005634 nucleusISO
GO:0005768 endosomeISO
GO:0005768 endosomeIDA
GO:0005886 plasma membraneISS
GO:0005886 plasma membraneISO
GO:0005886 plasma membraneIBA
GO:0005901 caveolaISO
GO:0005923 bicellular tight junctionISO
GO:0009986 cell surfaceISS
GO:0009986 cell surfaceISO
GO:0016020 membraneISS
GO:0016323 basolateral plasma membraneISO
GO:0016324 apical plasma membraneISO
GO:0032991 protein-containing complexISO
GO:0043235 receptor complexISO
GO:0043235 receptor complexIBA
GO:0045121 membrane raftISS
GO:0045121 membrane raftISO
GO:0048179 activin receptor complexIBA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-MMU-162582 Signal TransductionIEA
R-MMU-170834 Signaling by TGF-beta Receptor ComplexIEA
R-MMU-2173788 Downregulation of TGF-beta receptor signalingIEA
R-MMU-2173789 TGF-beta receptor signaling activates SMADsIEA
R-MMU-2173791 TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)IEA
R-MMU-392499 Metabolism of proteinsIEA
R-MMU-5688426 DeubiquitinationIEA
R-MMU-5689880 Ub-specific processing proteasesIEA
R-MMU-597592 Post-translational protein modificationIEA
R-MMU-9006936 Signaling by TGF-beta family membersIEA

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0053 Apoptosis
KW-0067 ATP-binding
KW-0965 Cell junction
KW-1003 Cell membrane
KW-0221 Differentiation
KW-1015 Disulfide bond
KW-0325 Glycoprotein
KW-0341 Growth regulation
KW-1017 Isopeptide bond
KW-0418 Kinase
KW-0460 Magnesium
KW-0464 Manganese
KW-0472 Membrane
KW-0479 Metal-binding
KW-0547 Nucleotide-binding
KW-0597 Phosphoprotein
KW-0675 Receptor
KW-1185 Reference proteome
KW-0723 Serine/threonine-protein kinase
KW-0732 Signal
KW-0796 Tight junction
KW-0808 Transferase
KW-0812 Transmembrane
KW-1133 Transmembrane helix
KW-0832 Ubl conjugation

Interpro

InterPro ID InterPro Term
IPR000472 Activin_recp
IPR003605 GS_dom
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR008271 Ser/Thr_kinase_AS
IPR000333 TGFB_receptor

PROSITE

PROSITE ID PROSITE Term
PS51256 GS
PS00107 PROTEIN_KINASE_ATP
PS50011 PROTEIN_KINASE_DOM
PS00108 PROTEIN_KINASE_ST

Pfam

Pfam ID Pfam Term
PF01064 Activin_recp
PF00069 Pkinase
PF08515 TGF_beta_GS

Protein-protein interaction

Protein-miRNA interaction