Gene: Boc

Basic information

Tag Content
Uniprot ID Q6AZB0; Q6KAM5; Q6P5H3; Q7TMJ3; Q8CE73; Q8CE91; Q8R377; Q923W7;
Entrez ID 117606
Genbank protein ID AAH26443.1; AAH62892.1; AAH56138.1; AAK71999.1; AAH78631.1; BAC26176.1; BAC26110.1; BAD21432.1;
Genbank nucleotide ID NM_172506.2
Ensembl protein ID
Ensembl nucleotide ID
Gene name Brother of CDO
Gene symbol Boc
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage
Data sources Manually collected
Reference 21183473
Functional description Component of a cell-surface receptor complex that mediates cell-cell interactions between muscle precursor cells. Promotes differentiation of myogenic cells.
Sequence
MTTCRRERPI LTLLWILMAT AGCLADLNEV PQVTVQPMST VQKLGGTVIL GCVVEPPWMN 60
VTWRFNGKEL NGSDDALGVF ITRGTLVIAA LNNHTVGRYQ CVARMPAGAV ASVPATVTLA 120
NLQDFKLDVQ HVIEVDEGNT AVIACHLPES HPKAQVRYSV KQEWLEASRD NYLIMPSGNL 180
QIVNASQEDE GMYKCAAYNP VTQEVKTSGS GDRLRVRRST AEAARIIYPL EAQTVIVTKG 240
QSLILECVAS GIPPPRVTWA KDGSSIAAYN KTRFLLSNLL IDTTSEEDSG TYRCMASNGV 300
GDPGAAVILY NVQVFEPPEV TVELSQLVIP WGQSAKLTCE VRGNPPPSVL WLRNAVPLTS 360
SQRLRLSRRA LRVVSVGPED EGVYQCMAEN AVGSAHAVVQ LRTARPDTTL RPGRDTKPIA 420
ATPPMPPSRP SRPDQMLREQ PGLVKPPTSS VQPTSLKCPG EEQVAPAEAP IILSSPRTSK 480
TDSYELVWRP RHEGSSRTPI LYYVVKHRKV TNSSDDWTIS GIPANQHRLT LTRLDPGSLY 540
EVEMAAYNCA GEGQTAMVTF RTGRRPKPEI VASKEQQIQR DDPGASLQSS SQPDHGRLSP 600
PEAPDRPTIS TASETSVYVT WIPRGNGGFP IQSFRVEYKK LKKVGDWILA TSAIPPSRLS 660
VEITGLEKGI SYKFRVRALN MLGESEPSAP SRPYVVSGYS GRVYERPVAG PYITFTDAVN 720
ETTIMLKWMY IPASNNNTPI HGFYIYYRPT DSDNDSDYKK DMVEGDRYWH SISHLQPETS 780
YDIKMQCFNE GGESEFSNVM ICETKARKFS GQPGRPPPLT LAPPQPPPLE TMERPVGTGA 840
MVARASDLPY LIVGVVLGSI VLIIVTFIPF CLWRAWSKQK HTTDLGFPRS ALLSSSCQYT 900
MVPLEGLPGH QANGQPYLGG VSGRACVSRV HGSRGCPAAT VGCPGRKPQQ HCPGELAQQR 960
EDTNSQLRQP IVSNGYDLQN QQVARGPQCA SGVGAFLYTL PDDSTHQLLQ PQDCCHLQKQ 1020
PVTTCQTAVR RTSESPGLES SWDPPYHSGP RCCLGLVPVE EVDSSDSCQV GGGDWSSQHP 1080
SGTYTGQERG MRFSPSPSVH VSFETPPPTI

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database


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Protein disorder information

Orthologous information

There is no orthologous record for this gene !

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0005515 protein bindingIPI

GO:Biological Process

GO ID GO Term Evidence
GO:0007224 smoothened signaling pathwayIDA
GO:0007411 axon guidanceIMP
GO:0007411 axon guidanceISO
GO:0016202 regulation of striated muscle tissue developmentISO
GO:0030030 cell projection organizationIMP
GO:0045663 positive regulation of myoblast differentiationIMP
GO:0098609 cell-cell adhesionTAS

GO:Cellular Component

GO ID GO Term Evidence
GO:0005654 nucleoplasmISO
GO:0005886 plasma membraneTAS
GO:0005887 integral component of plasma membraneISA
GO:0009986 cell surfaceTAS
GO:0030424 axonIDA
GO:0030426 growth coneIDA
GO:0043025 neuronal cell bodyIDA
GO:0044295 axonal growth coneISO

Reactome Pathway

Reactome ID Reactome Term Evidence
R-MMU-1266738 Developmental BiologyIEA
R-MMU-162582 Signal TransductionIEA
R-MMU-525793 MyogenesisIEA
R-MMU-5358351 Signaling by HedgehogIEA
R-MMU-5632684 Hedgehog 'on' stateIEA
R-MMU-5635838 Activation of SMOIEA

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0025 Alternative splicing
KW-0130 Cell adhesion
KW-1015 Disulfide bond
KW-0325 Glycoprotein
KW-0393 Immunoglobulin domain
KW-0472 Membrane
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0677 Repeat
KW-0732 Signal
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR032982 BOC
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR013151 Immunoglobulin

PROSITE

PROSITE ID PROSITE Term
PS50853 FN3
PS50835 IG_LIKE

Pfam

Pfam ID Pfam Term
PF00041 fn3
PF07679 I-set
PF00047 ig

Protein-protein interaction

Protein-miRNA interaction