Gene: SDCCAG8

Basic information

Tag Content
Uniprot ID Q86SQ7; O60527; Q3ZCR6; Q8N5F2; Q9P0F1;
Entrez ID 10806
Genbank protein ID AAC18039.1; AAH45832.1; AAO27830.1; AAF28908.1; AAH32454.1;
Genbank nucleotide ID XM_005273023.4; NM_006642.3;
Ensembl protein ID ENSP00000355499; ENSP00000483550;
Ensembl nucleotide ID ENSG00000054282; ENSG00000276111;
Gene name Serologically defined colon cancer antigen 8
Gene symbol SDCCAG8
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Plays a role in the establishment of cell polarity and epithelial lumen formation (By similarity). Plays also an essential role in ciliogenesis and subsequent Hedgehog signaling pathway that requires the presence of intact primary cilia for pathway activation. Mechanistically, interacts with and mediates RABEP2 centrosomal localization which is critical for ciliogenesis (PubMed:27224062).
Sequence
MAKSPENSTL EEILGQYQRS LREHASRSIH QLTCALKEGD VTIGEDAPNL SFSTSVGNED 60
ARTAWPELQQ SHAVNQLKDL LRQQADKESE VSPSRRRKMS PLRSLEHEET NMPTMHDLVH 120
TINDQSQYIH HLEAEVKFCK EELSGMKNKI QVVVLENEGL QQQLKSQRQE ETLREQTLLD 180
ASGNMHNSWI TTGEDSGVGE TSKRPFSHDN ADFGKAASAG EQLELEKLKL TYEEKCEIEE 240
SQLKFLRNDL AEYQRTCEDL KEQLKHKEFL LAANTCNRVG GLCLKCAQHE AVLSQTHTNV 300
HMQTIERLVK ERDDLMSALV SVRSSLADTQ QREASAYEQV KQVLQISEEA NFEKTKALIQ 360
CDQLRKELER QAERLEKELA SQQEKRAIEK DMMKKEITKE REYMGSKMLI LSQNIAQLEA 420
QVEKVTKEKI SAINQLEEIQ SQLASREMDV TKVCGEMRYQ LNKTNMEKDE AEKEHREFRA 480
KTNRDLEIKD QEIEKLRIEL DESKQHLEQE QQKAALAREE CLRLTELLGE SEHQLHLTRQ 540
EKDSIQQSFS KEAKAQALQA QQREQELTQK IQQMEAQHDK TENEQYLLLT SQNTFLTKLK 600
EECCTLAKKL EQISQKTRSE IAQLSQEKRY TYDKLGKLQR RNEELEEQCV QHGRVHETMK 660
QRLRQLDKHS QATAQQLVQL LSKQNQLLLE RQSLSEEVDR LRTQLPSMPQ SDC 713

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologSDCCAG8102173768A0A452F279Capra hircusPredictionMore>>
1:1 orthologSDCCAG810806Q86SQ7Homo sapiensPredictionMore>>
1:1 orthologSdccag876816Q80UF4CPOMus musculusPublicationMore>>
1:1 orthologSDCCAG8469732K7C6J2Pan troglodytesPredictionMore>>
1:1 orthologA0A480L6N0Sus scrofaPredictionMore>>
1:1 orthologSDCCAG8100353951G1TAG0Oryctolagus cuniculusPredictionMore>>
1:1 orthologSdccag8A0A0G2JUD0Rattus norvegicusPredictionMore>>
1:1 orthologsdccag8A0A140TAU3Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0005515 protein bindingIPI

GO:Biological Process

GO ID GO Term Evidence
GO:0000086 G2/M transition of mitotic cell cycleTAS
GO:0001764 neuron migrationIBA
GO:0007098 centrosome cycleIEA
GO:0010389 regulation of G2/M transition of mitotic cell cycleTAS
GO:0030010 establishment of cell polarityISS
GO:0030010 establishment of cell polarityIBA
GO:0031023 microtubule organizing center organizationIBA
GO:0035148 tube formationISS
GO:0035148 tube formationIBA
GO:0097711 ciliary basal body-plasma membrane dockingTAS
GO:1902017 regulation of cilium assemblyIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0005813 centrosomeIDA
GO:0005813 centrosomeIBA
GO:0005814 centrioleIDA
GO:0005814 centrioleIBA
GO:0005829 cytosolTAS
GO:0005911 cell-cell junctionIDA
GO:0034451 centriolar satelliteIEA
GO:0036064 ciliary basal bodyIEA
GO:0097733 photoreceptor cell ciliumIEA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-1640170 Cell CycleTAS
R-HSA-1852241 Organelle biogenesis and maintenanceTAS
R-HSA-2565942 Regulation of PLK1 Activity at G2/M TransitionTAS
R-HSA-380259 Loss of Nlp from mitotic centrosomesTAS
R-HSA-380270 Recruitment of mitotic centrosome proteins and complexesTAS
R-HSA-380284 Loss of proteins required for interphase microtubule organization from the centrosomeTAS
R-HSA-380287 Centrosome maturationTAS
R-HSA-380320 Recruitment of NuMA to mitotic centrosomesTAS
R-HSA-453274 Mitotic G2-G2/M phasesTAS
R-HSA-5617833 Cilium AssemblyTAS
R-HSA-5620912 Anchoring of the basal body to the plasma membraneTAS
R-HSA-68877 Mitotic PrometaphaseTAS
R-HSA-68886 M PhaseTAS
R-HSA-69275 G2/M TransitionTAS
R-HSA-69278 Cell Cycle, MitoticTAS
R-HSA-8854518 AURKA Activation by TPX2TAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0083 Bardet-Biedl syndrome
KW-0965 Cell junction
KW-0966 Cell projection
KW-1186 Ciliopathy
KW-0970 Cilium biogenesis/degradation
KW-0175 Coiled coil
KW-0963 Cytoplasm
KW-0206 Cytoskeleton
KW-0901 Leber congenital amaurosis
KW-0983 Nephronophthisis
KW-0550 Obesity
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0980 Senior-Loken syndrome

Interpro

InterPro ID InterPro Term
IPR031887 SDCCAG8

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF15964 CCCAP

Protein-protein interaction

Protein-miRNA interaction