Gene: TEX11

Basic information

Tag Content
Uniprot ID Q8IYF3; A8K8V6; Q5JQQ8; Q96LZ4; Q96M47; Q9BXU6;
Entrez ID 56159
Genbank protein ID BAB71520.1; BAF85160.1; AAK31973.1; AAH36016.2; EAX05331.1; BAB71465.1;
Genbank nucleotide ID NM_031276.2; XM_011530996.1; NM_001003811.1;
Ensembl protein ID ENSP00000379226; ENSP00000363440; ENSP00000340995; ENSP00000363453;
Ensembl nucleotide ID ENSG00000120498
Gene name Testis-expressed protein 11
Gene symbol TEX11
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Manually collected
Reference 26449438
Functional description Regulator of crossing-over during meiosis. Involved in initiation and/or maintenance of chromosome synapsis and formation of crossovers.
Sequence
MISAHCNLRL LCSSDSSASA SQVAGTTEVV ENLVTNDNSP NIPEAIDRLF SDIANINRES 60
MAEITDIQIE EMAVNLWNWA LTIGGGWLVN EEQKIRLHYV ACKLLSMCEA SFASEQSIQR 120
LIMMNMRIGK EWLDAGNFLI ADECFQAAVA SLEQLYVKLI QRSSPEADLT MEKITVESDH 180
FRVLSYQAES AVAQGDFQRA SMCVLQCKDM LMRLPQMTSS LHHLCYNFGV ETQKNNKYEE 240
SSFWLSQSYD IGKMDKKSTG PEMLAKVLRL LATNYLDWDD TKYYDKALNA VNLANKEHLS 300
SPGLFLKMKI LLKGETSNEE LLEAVMEILH LDMPLDFCLN IAKLLMDHER ESVGFHFLTI 360
IHERFKSSEN IGKVLILHTD MLLQRKEELL AKEKIEEIFL AHQTGRQLTA ESMNWLHNIL 420
WRQAASSFEV QNYTDALQWY YYSLRFYSTD EMDLDFTKLQ RNMACCYLNL QQLDKAKEAV 480
AEAERHDPRN VFTQFYIFKI AVIEGNSERA LQAIITLENI LTDEESEDND LVAERGSPTM 540
LLSLAAQFAL ENGQQIVAEK ALEYLAQHSE DQEQVLTAVK CLLRFLLPKI AEMPESEDKK 600
KEMDRLLTCL NRAFVKLSQP FGEEALSLES RANEAQWFRK TAWNLAVQCD KDPVMMREFF 660
ILSYKMSQFC PSDQVILIAR KTCLLMAVAV DLEQGRKAST AFEQTMFLSR ALEEIQTCND 720
IHNFLKQTGT FSNDSCEKLL LLYEFEVRAK LNDPLLESFL ESVWELPHLE TKTFETIAII 780
AMEKPAHYPL IALKALKKAL LLYKKEEPID ISQYSKCMHN LVNLSVPDGA SNVELCPLEE 840
VWGYFEDALS HISRTKDYPE MEILWLMVKS WNTGVLMFSR SKYASAEKWC GLALRFLNHL 900
TSFKESYETQ MNMLYSQLVE ALSNNKGPVF HEHGYWSKSD

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTEX1156159Q8IYF3Homo sapiensPublicationMore>>
1:1 orthologTex1183558Q14AT2Mus musculusPredictionMore>>
1:1 orthologTEX11H2R4P5Pan troglodytesPredictionMore>>
1:1 orthologTex11D3Z868Rattus norvegicusPredictionMore>>
1:1 orthologtex11F1QIP8Danio rerioPredictionMore>>

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
TEX11c.2541A>C; p.D847EWES and Sanger sequencing26449438

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0005515 protein bindingIPI

GO:Biological Process

GO ID GO Term Evidence
GO:0000712 resolution of meiotic recombination intermediatesIEA
GO:0006311 meiotic gene conversionISS
GO:0007060 male meiosis chromosome segregationIBA
GO:0007130 synaptonemal complex assemblyIBA
GO:0007131 reciprocal meiotic recombinationISS
GO:0007131 reciprocal meiotic recombinationIBA
GO:0008584 male gonad developmentIEA
GO:0009566 fertilizationIEA
GO:0043066 negative regulation of apoptotic processIEA
GO:0051026 chiasma assemblyIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0000801 central elementIBA
GO:0000795 synaptonemal complexISS
GO:0000795 synaptonemal complexIBA

Reactome Pathway

Reactome ID Reactome Term Evidence

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0158 Chromosome
KW-0225 Disease mutation
KW-0469 Meiosis
KW-0621 Polymorphism
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR013940 Spo22/ZIP4/TEX11
IPR042861 TEX11
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF08631 SPO22

Protein-protein interaction