Gene: DZIP1L

Basic information

Tag Content
Uniprot ID Q8IYY4; C9JUG5; Q96M38;
Entrez ID 199221
Genbank protein ID BAB71474.1; AAH33308.1;
Genbank nucleotide ID NM_173543.2; NM_001170538.1;
Ensembl protein ID ENSP00000332148; ENSP00000419486;
Ensembl nucleotide ID ENSG00000158163
Gene name Zinc finger protein DZIP1L
Gene symbol DZIP1L
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Involved in primary cilium formation (PubMed:19852954, PubMed:28530676). Probably acts as a transition zone protein required for localization of PKD1/PC1 and PKD2/PC2 to the ciliary membrane (PubMed:28530676).
Sequence
MQSPAATAEG LSGPLFGAYT FPTFKFQPRH DSMDWRRIST LDVDRVAREL DVATLQENIA 60
GITFCNLDRE VCSRCGQPVD PALLKVLRLA QLIIEYLLHC QDCLSASVAQ LEARLQTSLG 120
QQQRGQQELG RQADELKGVR EESRRRRKMI STLQQLLMQT GTHSYHTCHL CDKTFMNATF 180
LRGHIQRRHA GVAEGGKQKK QEQPVEEVLE ELRAKLKWTQ GELEAQREAE RQRQLQEAEL 240
IHQREIEAKK EFDKWKEQEW TKLYGEIDKL KKLFWDEFKN VAKQNSTLEE KLRALQSHSV 300
MESKLGSLRD EESEEWLRQA RELQALREKT EIQKTEWKRK VKELHEEHMA EKKELQEENQ 360
RLQASLSQDQ KKAAAQSQCQ ISTLRAQLQE QARIIASQEE MIQSLSLRKV EGIHKVPKAV 420
DTEEDSPEEE MEDSQDEQHK VLAALRRNPT LLKHFRPILE DTLEEKLESM GIRKDAKGIS 480
IQTLRHLESL LRVQREQKAR KFSEFLSLRG KLVKEVTSRA KERQENGAVV SQPDGQPSVK 540
SQQSTLVTRE AQPKTRTLQV ALPSTPAEPP PPTRQSHGSH GSSLTQVSAP APRPGLHGPS 600
STPPSSGPGM STPPFSSEED SEGDRVQRVS LQPPKVPSRM VPRPKDDWDW SDTETSEENA 660
QPPGQGSGTL VQSMVKNLEK QLEAPAKKPA GGVSLFFMPN AGPQRAATPG RKPQLSEDES 720
DLEISSLEDL PLDLDQREKP KPLSRSKLPE KFGTGPQSSG QPRVPAW 767

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologDZIP1LA0A452ERJ9Capra hircusPredictionMore>>
1:1 orthologDZIP1L199221Q8IYY4Homo sapiensPredictionMore>>
1:1 orthologDzip1l72507Q499E4CPO,CLPMus musculusPublicationMore>>
1:1 orthologDZIP1LA0A2I3RUU2Pan troglodytesPredictionMore>>
1:1 orthologDZIP1LA0A287B413Sus scrofaPredictionMore>>
1:1 orthologDZIP1L100352428G1SKV1Oryctolagus cuniculusPredictionMore>>
1:1 orthologDzip1l315952Q5XIA0Rattus norvegicusPredictionMore>>
1:1 orthologdzip1lX1WEH0Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003676 nucleic acid bindingIEA
GO:0005515 protein bindingIPI
GO:0046872 metal ion bindingIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0007224 smoothened signaling pathwayIEA
GO:0021532 neural tube patterningIEA
GO:0032880 regulation of protein localizationIMP
GO:0033504 floor plate developmentIEA
GO:0060271 cilium assemblyIMP
GO:0060271 cilium assemblyIBA
GO:0061512 protein localization to ciliumIEA
GO:1905349 ciliary transition zone assemblyIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005814 centrioleIDA
GO:0005930 axonemeIEA
GO:0036064 ciliary basal bodyIDA
GO:0036064 ciliary basal bodyIBA

Reactome Pathway

Reactome ID Reactome Term Evidence

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0966 Cell projection
KW-1186 Ciliopathy
KW-0969 Cilium
KW-0175 Coiled coil
KW-0963 Cytoplasm
KW-0206 Cytoskeleton
KW-0225 Disease mutation
KW-0479 Metal-binding
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0862 Zinc
KW-0863 Zinc-finger

Interpro

InterPro ID InterPro Term
IPR032714 DZIP1_N
IPR013087 Znf_C2H2_type

PROSITE

PROSITE ID PROSITE Term
PS00028 ZINC_FINGER_C2H2_1
PS50157 ZINC_FINGER_C2H2_2

Pfam

Pfam ID Pfam Term
PF13815 Dzip-like_N

Protein-protein interaction

Protein-miRNA interaction