Gene: DPH1

Basic information

Tag Content
Uniprot ID Q9BZG8; D3DTI3; Q16439; Q4VBA2; Q9BTW7; Q9UCY0;
Entrez ID 1801
Genbank protein ID EAW90569.1; AAH03099.2; EAW90567.1; AAD10198.1; AAV38681.1; AAB36297.1; AAK13428.1; AAH96088.1;
Genbank nucleotide ID NM_001383.4; NM_001346576.1;
Ensembl protein ID ENSP00000263083; ENSP00000458726;
Ensembl nucleotide ID ENSG00000108963
Gene name 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1
Gene symbol DPH1
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2 (EEF2). When overexpressed, suppresses colony formation ability and growth rate of ovarian cancer cells. Acts also as a tumor suppressor in lung and breast cancers (By similarity). Plays a role in embryonic growth, organogenesis and postnatal survival (By similarity).
Sequence
MRRQVMAALV VSGAAEQGGR DGPGRGRAPR GRVANQIPPE ILKNPQLQAA IRVLPSNYNF 60
EIPKTIWRIQ QAQAKKVALQ MPEGLLLFAC TIVDILERFT EAEVMVMGDV TYGACCVDDF 120
TARALGADFL VHYGHSCLIP MDTSAQDFRV LYVFVDIRID TTHLLDSLRL TFPPATALAL 180
VSTIQFVSTL QAAAQELKAE YRVSVPQCKP LSPGEILGCT SPRLSKEVEA VVYLGDGRFH 240
LESVMIANPN VPAYRYDPYS KVLSREHYDH QRMQAARQEA IATARSAKSW GLILGTLGRQ 300
GSPKILEHLE SRLRALGLSF VRLLLSEIFP SKLSLLPEVD VWVQVACPRL SIDWGTAFPK 360
PLLTPYEAAV ALRDISWQQP YPMDFYAGSS LGPWTVNHGQ DRRPHAPGRP ARGKVQEGSA 420
RPPSAVACED CSCRDEKVAP LAP 443

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologDPH1F1MGR8Bos taurusPredictionMore>>
1:1 orthologDPH1106501727A0A452DRF6Capra hircusPredictionMore>>
1:1 orthologDPH11801Q9BZG8Homo sapiensPredictionMore>>
1:1 orthologDph1116905Q5NCQ5CPOMus musculusPublicationMore>>
1:1 orthologDPH1454415H2QBU9Pan troglodytesPredictionMore>>
1:1 orthologDph1287523B2RYK2Rattus norvegicusPredictionMore>>
1:1 orthologdph1F1QK18Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0005515 protein bindingIPI
GO:0016740 transferase activityIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0008283 cell population proliferationIEA
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidineIEA
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidineIBA
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidineTAS

GO:Cellular Component

GO ID GO Term Evidence
GO:0005654 nucleoplasmIDA
GO:0005829 cytosolTAS
GO:0030054 cell junctionIDA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-163841 Gamma carboxylation, hypusine formation and arylsulfatase activationTAS
R-HSA-392499 Metabolism of proteinsTAS
R-HSA-5358493 Synthesis of diphthamide-EEF2TAS
R-HSA-597592 Post-translational protein modificationTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0963 Cytoplasm
KW-0225 Disease mutation
KW-0242 Dwarfism
KW-0038 Ectodermal dysplasia
KW-1063 Hypotrichosis
KW-0991 Mental retardation
KW-0539 Nucleus
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0949 S-adenosyl-L-methionine
KW-0808 Transferase
KW-0043 Tumor suppressor

Interpro

InterPro ID InterPro Term
IPR016435 DPH1/DPH2
IPR042263 DPH1/DPH2_1
IPR042264 DPH1/DPH2_2
IPR042265 DPH1/DPH2_3
IPR035435 DPH1/DPH2_euk_archaea

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01866 Diphthamide_syn

Protein-protein interaction

Protein-miRNA interaction