Gene: ESRP2

Basic information

Tag Content
Uniprot ID Q9H6T0; Q8N6H8; Q8WZ15; Q9H6I4;
Entrez ID 80004
Genbank protein ID AAL55761.1; BAB15275.1; AAH30146.1; BAB15173.1;
Genbank nucleotide ID NM_024939.2
Ensembl protein ID ENSP00000454554; ENSP00000418748;
Ensembl nucleotide ID ENSG00000103067
Gene name Epithelial splicing regulatory protein 2
Gene symbol ESRP2
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description mRNA splicing factor that regulates the formation of epithelial cell-specific isoforms. Specifically regulates the expression of FGFR2-IIIb, an epithelial cell-specific isoform of FGFR2. Also regulates the splicing of CD44, CTNND1, ENAH, 3 transcripts that undergo changes in splicing during the epithelial-to-mesenchymal transition (EMT). Acts by directly binding specific sequences in mRNAs. Binds the GU-rich sequence motifs in the ISE/ISS-3, a cis-element regulatory region present in the mRNA of FGFR2.
Sequence
MTPPPPPPPP PGPDPAADPA ADPCPWPGSL VVLFGATAGA LGRDLGSDET DLILLVWQVV 60
EPRSRQVGTL HKSLVRAEAA ALSTQCREAS GLSADSLARA EPLDKVLQQF SQLVNGDVAL 120
LGGGPYMLCT DGQQLLRQVL HPEASRKNLV LPDMFFSFYD LRREFHMQHP STCPARDLTV 180
ATMAQGLGLE TDATEDDFGV WEVKTMVAVI LHLLKEPSSQ LFSKPEVIKQ KYETGPCSDS 240
TVPCPYSSKA DVVDSETVVR ARGLPWQSSD QDVARFFKGL NVARGGVALC LNAQGRRNGE 300
ALIRFVDSEQ RDLALQRHKH HMGVRYIEVY KATGEEFVKI AGGTSLEVAR FLSREDQVIL 360
RLRGLPFSAG PTDVLGFLGP ECPVTGGTEG LLFVRHPDGR PTGDAFALFA CEELAQAALR 420
RHKGMLGKRY IELFRSTAAE VQQVLNRYAS GPLLPTLTAP LLPIPFPLAP GTGRDCVRLR 480
GLPYTATIED ILSFLGEAAA DIRPHGVHMV LNQQGRPSGD AFIQMTSAER ALAAAQRCHK 540
KVMKERYVEV VPCSTEEMSR VLMGGTLGRS GMSPPPCKLP CLSPPTYTTF QATPTLIPTE 600
TAALYPSSAL LPAARVPAAP TPVAYYPGPA TQLYLNYTAY YPSPPVSPTT VGYLTTPTAA 660
LASAPTSVLS QSGALVRMQG VPYTAGMKDL LSVFQAYQLP ADDYTSLMPV GDPPRTVLQA 720
PKEWVCL 727

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologESRP2489745F1PA85Canis lupus familiarisPredictionMore>>
1:1 orthologESRP2102181230A0A452FYS9Capra hircusPredictionMore>>
1:1 orthologESRP280004Q9H6T0Homo sapiensPredictionMore>>
1:1 orthologEsrp277411Q8K0G8CLPMus musculusPublicationMore>>
1:1 orthologESRP2A0A2I3SHP8Pan troglodytesPredictionMore>>
1:1 orthologESRP2100355035G1SF15Oryctolagus cuniculusPredictionMore>>
1:1 orthologEsrp2307810G3V8M2Rattus norvegicusPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003723 RNA bindingHDA
GO:0003729 mRNA bindingIDA

GO:Biological Process

GO ID GO Term Evidence
GO:0000380 alternative mRNA splicing, via spliceosomeIEA
GO:0008543 fibroblast growth factor receptor signaling pathwayTAS
GO:0043484 regulation of RNA splicingIDA
GO:0050679 positive regulation of epithelial cell proliferationIEA
GO:0060441 epithelial tube branching involved in lung morphogenesisIEA
GO:0060445 branching involved in salivary gland morphogenesisIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005634 nucleusIDA
GO:0005654 nucleoplasmIDA
GO:0005654 nucleoplasmTAS

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-162582 Signal TransductionTAS
R-HSA-190236 Signaling by FGFRTAS
R-HSA-5654738 Signaling by FGFR2TAS
R-HSA-6803529 FGFR2 alternative splicingTAS
R-HSA-9006934 Signaling by Receptor Tyrosine KinasesTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0507 mRNA processing
KW-0508 mRNA splicing
KW-0539 Nucleus
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0677 Repeat
KW-0694 RNA-binding

Interpro

InterPro ID InterPro Term
IPR034431 ESRP2
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR012337 RNaseH-like_sf
IPR036397 RNaseH_sf
IPR000504 RRM_dom

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term

Protein-protein interaction

Protein-miRNA interaction