Gene: NCOR2

Basic information

Tag Content
Uniprot ID Q9Y618; O00613; O15416; O15421; Q13354; Q56D06; Q59GM0; Q9Y5U0;
Entrez ID 9612
Genbank protein ID AAB91446.1; BAD92326.1; AAB91452.1; AAD22973.1; AAD20946.1; AAC50236.1; AAB50847.1; AAX77219.1;
Genbank nucleotide ID NM_001206654.1; NM_001077261.3; NM_006312.5;
Ensembl protein ID ENSP00000384018
Ensembl nucleotide ID ENSG00000196498
Gene name Nuclear receptor corepressor 2
Gene symbol NCOR2
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Transcriptional corepressor (PubMed:20812024). Mediates the transcriptional repression activity of some nuclear receptors by promoting chromatin condensation, thus preventing access of the basal transcription. Isoform 1 and isoform 4 have different affinities for different nuclear receptors. Involved in the regulation BCL6-dependent of the germinal center (GC) reactions, mainly through the control of the GC B-cells proliferation and survival. Recruited by ZBTB7A to the androgen response elements/ARE on target genes, negatively regulates androgen receptor signaling and androgen-induced cell proliferation (PubMed:20812024).
Sequence
MSGSTQPVAQ TWRATEPRYP PHSLSYPVQI ARTHTDVGLL EYQHHSRDYA SHLSPGSIIQ 60
PQRRRPSLLS EFQPGNERSQ ELHLRPESHS YLPELGKSEM EFIESKRPRL ELLPDPLLRP 120
SPLLATGQPA GSEDLTKDRS LTGKLEPVSP PSPPHTDPEL ELVPPRLSKE ELIQNMDRVD 180
REITMVEQQI SKLKKKQQQL EEEAAKPPEP EKPVSPPPIE SKHRSLVQII YDENRKKAEA 240
AHRILEGLGP QVELPLYNQP SDTRQYHENI KINQAMRKKL ILYFKRRNHA RKQWEQKFCQ 300
RYDQLMEAWE KKVERIENNP RRRAKESKVR EYYEKQFPEI RKQRELQERM QSRVGQRGSG 360
LSMSAARSEH EVSEIIDGLS EQENLEKQMR QLAVIPPMLY DADQQRIKFI NMNGLMADPM 420
KVYKDRQVMN MWSEQEKETF REKFMQHPKN FGLIASFLER KTVAECVLYY YLTKKNENYK 480
SLVRRSYRRR GKSQQQQQQQ QQQQQQQQQQ PMPRSSQEEK DEKEKEKEAE KEEEKPEVEN 540
DKEDLLKEKT DDTSGEDNDE KEAVASKGRK TANSQGRRKG RITRSMANEA NSEEAITPQQ 600
SAELASMELN ESSRWTEEEM ETAKKGLLEH GRNWSAIARM VGSKTVSQCK NFYFNYKKRQ 660
NLDEILQQHK LKMEKERNAR RKKKKAPAAA SEEAAFPPVV EDEEMEASGV SGNEEEMVEE 720
AEALHASGNE VPRGECSGPA TVNNSSDTES IPSPHTEAAK DTGQNGPKPP ATLGADGPPP 780
GPPTPPPEDI PAPTEPTPAS EATGAPTPPP APPSPSAPPP VVPKEEKEEE TAAAPPVEEG 840
EEQKPPAAEE LAVDTGKAEE PVKSECTEEA EEGPAKGKDA EAAEATAEGA LKAEKKEGGS 900
GRATTAKSSG APQDSDSSAT CSADEVDEAE GGDKNRLLSP RPSLLTPTGD PRANASPQKP 960
LDLKQLKQRA AAIPPIQVTK VHEPPREDAA PTKPAPPAPP PPQNLQPESD APQQPGSSPR 1020
GKSRSPAPPA DKEAFAAEAQ KLPGDPPCWT SGLPFPVPPR EVIKASPHAP DPSAFSYAPP 1080
GHPLPLGLHD TARPVLPRPP TISNPPPLIS SAKHPSVLER QIGAISQGMS VQLHVPYSEH 1140
AKAPVGPVTM GLPLPMDPKK LAPFSGVKQE QLSPRGQAGP PESLGVPTAQ EASVLRGTAL 1200
GSVPGGSITK GIPSTRVPSD SAITYRGSIT HGTPADVLYK GTITRIIGED SPSRLDRGRE 1260
DSLPKGHVIY EGKKGHVLSY EGGMSVTQCS KEDGRSSSGP PHETAAPKRT YDMMEGRVGR 1320
AISSASIEGL MGRAIPPERH SPHHLKEQHH IRGSITQGIP RSYVEAQEDY LRREAKLLKR 1380
EGTPPPPPPS RDLTEAYKTQ ALGPLKLKPA HEGLVATVKE AGRSIHEIPR EELRHTPELP 1440
LAPRPLKEGS ITQGTPLKYD TGASTTGSKK HDVRSLIGSP GRTFPPVHPL DVMADARALE 1500
RACYEESLKS RPGTASSSGG SIARGAPVIV PELGKPRQSP LTYEDHGAPF AGHLPRGSPV 1560
TTREPTPRLQ EGSLSSSKAS QDRKLTSTPR EIAKSPHSTV PEHHPHPISP YEHLLRGVSG 1620
VDLYRSHIPL AFDPTSIPRG IPLDAAAAYY LPRHLAPNPT YPHLYPPYLI RGYPDTAALE 1680
NRQTIINDYI TSQQMHHNAA TAMAQRADML RGLSPRESSL ALNYAAGPRG IIDLSQVPHL 1740
PVLVPPTPGT PATAMDRLAY LPTAPQPFSS RHSSSPLSPG GPTHLTKPTT TSSSERERDR 1800
DRERDRDRER EKSILTSTTT VEHAPIWRPG TEQSSGSSGG GGGSSSRPAS HSHAHQHSPI 1860
SPRTQDALQQ RPSVLHNTGM KGIITAVEPS TPTVLRSTST SSPVRPAATF PPATHCPLGG 1920
TLDGVYPTLM EPVLLPKEAP RVARPERPRA DTGHAFLAKP PARSGLEPAS SPSKGSEPRP 1980
LVPPVSGHAT IARTPAKNLA PHHASPDPPA PPASASDPHR EKTQSKPFSI QELELRSLGY 2040
HGSSYSPEGV EPVSPVSSPS LTHDKGLPKH LEELDKSHLE GELRPKQPGP VKLGGEAAHL 2100
PHLRPLPESQ PSSSPLLQTA PGVKGHQRVV TLAQHISEVI TQDYTRHHPQ QLSAPLPAPL 2160
YSFPGASCPV LDLRRPPSDL YLPPPDHGAP ARGSPHSEGG KRSPEPNKTS VLGGGEDGIE 2220
PVSPPEGMTE PGHSRSAVYP LLYRDGEQTE PSRMGSKSPG NTSQPPAFFS KLTESNSAMV 2280
KSKKQEINKK LNTHNRNEPE YNISQPGTEI FNMPAITGTG LMTYRSQAVQ EHASTNMGLE 2340
AIIRKALMGK YDQWEESPPL SANAFNPLNA SASLPAAMPI TAADGRSDHT LTSPGGGGKA 2400
KVSGRPSSRK AKSPAPGLAS GDRPPSVSSV HSEGDCNRRT PLTNRVWEDR PSSAGSTPFP 2460
YNPLIMRLQA GVMASPPPPG LPAGSGPLAG PHHAWDEEPK PLLCSQYETL SDSE 2514

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression in different tissues (GTEx V7)

  

Gene expression in different tissues (ENCODE)

  

Protein structural annotations

3D structure in PDB database

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologNCOR2A0A452E1G4Capra hircusPredictionMore>>
1:1 orthologNCOR29612Q9Y618Homo sapiensPredictionMore>>
1:1 orthologNcor220602Q9WU42CPOMus musculusPublicationMore>>
1:1 orthologNCOR2H2RC84Pan troglodytesPredictionMore>>
1:1 orthologNcor2360801D3ZXN9Rattus norvegicusPredictionMore>>
1:1 orthologncor2F1R8Z8Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0001012 RNA polymerase II regulatory region DNA bindingIBA
GO:0003682 chromatin bindingIBA
GO:0003714 transcription corepressor activityIMP
GO:0003714 transcription corepressor activityIDA
GO:0003714 transcription corepressor activityIBA
GO:0005112 Notch bindingIPI
GO:0005515 protein bindingIPI
GO:0035257 nuclear hormone receptor bindingIBA
GO:0035259 glucocorticoid receptor bindingIEA
GO:0042826 histone deacetylase bindingIPI
GO:0042826 histone deacetylase bindingIBA
GO:0043565 sequence-specific DNA bindingIBA
GO:0044877 protein-containing complex bindingIEA
GO:0046965 retinoid X receptor bindingIEA
GO:0047485 protein N-terminus bindingIPI

GO:Biological Process

GO ID GO Term Evidence
GO:0000122 negative regulation of transcription by RNA polymerase IIIMP
GO:0000122 negative regulation of transcription by RNA polymerase IIIBA
GO:0000122 negative regulation of transcription by RNA polymerase IITAS
GO:0007595 lactationIEA
GO:0010243 response to organonitrogen compoundIEA
GO:0010565 regulation of cellular ketone metabolic processIMP
GO:0019216 regulation of lipid metabolic processTAS
GO:0032355 response to estradiolIEA
GO:0044849 estrous cycleIEA
GO:0045892 negative regulation of transcription, DNA-templatedIMP
GO:0060766 negative regulation of androgen receptor signaling pathwayIMP
GO:1903799 negative regulation of production of miRNAs involved in gene silencing by miRNAIMP

GO:Cellular Component

GO ID GO Term Evidence
GO:0000118 histone deacetylase complexIBA
GO:0000790 nuclear chromatinIDA
GO:0000790 nuclear chromatinIBA
GO:0005634 nucleusIDA
GO:0005634 nucleusIC
GO:0005634 nucleusIBA
GO:0005654 nucleoplasmIDA
GO:0005654 nucleoplasmTAS
GO:0016020 membraneHDA
GO:0016363 nuclear matrixIDA
GO:0016604 nuclear bodyIDA
GO:0017053 transcriptional repressor complexIDA
GO:0017053 transcriptional repressor complexIBA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-HSA-1266738 Developmental BiologyIEA
R-HSA-1266738 Developmental BiologyTAS
R-HSA-1430728 MetabolismTAS
R-HSA-157118 Signaling by NOTCHIEA
R-HSA-162582 Signal TransductionIEA
R-HSA-162582 Signal TransductionTAS
R-HSA-1643685 DiseaseTAS
R-HSA-1643685 DiseaseIEA
R-HSA-170834 Signaling by TGF-beta Receptor ComplexIEA
R-HSA-170834 Signaling by TGF-beta Receptor ComplexTAS
R-HSA-1980143 Signaling by NOTCH1IEA
R-HSA-1989781 PPARA activates gene expressionTAS
R-HSA-2122947 NOTCH1 Intracellular Domain Regulates TranscriptionIEA
R-HSA-212436 Generic Transcription PathwayTAS
R-HSA-212436 Generic Transcription PathwayIEA
R-HSA-2173793 Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimerIEA
R-HSA-2173793 Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimerTAS
R-HSA-2173795 Downregulation of SMAD2/3:SMAD4 transcriptional activityIEA
R-HSA-2173795 Downregulation of SMAD2/3:SMAD4 transcriptional activityTAS
R-HSA-2644602 Signaling by NOTCH1 PEST Domain Mutants in CancerTAS
R-HSA-2644603 Signaling by NOTCH1 in CancerTAS
R-HSA-2644606 Constitutive Signaling by NOTCH1 PEST Domain MutantsTAS
R-HSA-2894858 Signaling by NOTCH1 HD+PEST Domain Mutants in CancerTAS
R-HSA-2894862 Constitutive Signaling by NOTCH1 HD+PEST Domain MutantsTAS
R-HSA-2990846 SUMOylationIEA
R-HSA-3108232 SUMO E3 ligases SUMOylate target proteinsIEA
R-HSA-3214815 HDACs deacetylate histonesTAS
R-HSA-3247509 Chromatin modifying enzymesTAS
R-HSA-350054 Notch-HLH transcription pathwayTAS
R-HSA-381340 Transcriptional regulation of white adipocyte differentiationIEA
R-HSA-381340 Transcriptional regulation of white adipocyte differentiationTAS
R-HSA-383280 Nuclear Receptor transcription pathwayTAS
R-HSA-3899300 SUMOylation of transcription cofactorsIEA
R-HSA-392499 Metabolism of proteinsIEA
R-HSA-400206 Regulation of lipid metabolism by PPARalphaTAS
R-HSA-4839726 Chromatin organizationTAS
R-HSA-556833 Metabolism of lipidsTAS
R-HSA-5663202 Diseases of signal transductionTAS
R-HSA-5663205 Infectious diseaseTAS
R-HSA-597592 Post-translational protein modificationIEA
R-HSA-73857 RNA Polymerase II TranscriptionTAS
R-HSA-73857 RNA Polymerase II TranscriptionIEA
R-HSA-74160 Gene expression (Transcription)TAS
R-HSA-74160 Gene expression (Transcription)IEA
R-HSA-8986944 Transcriptional Regulation by MECP2IEA
R-HSA-9005891 Loss of function of MECP2 in Rett syndromeIEA
R-HSA-9005895 Pervasive developmental disordersIEA
R-HSA-9006931 Signaling by Nuclear ReceptorsTAS
R-HSA-9006936 Signaling by TGF-beta family membersIEA
R-HSA-9006936 Signaling by TGF-beta family membersTAS
R-HSA-9022537 Loss of MECP2 binding ability to the NCoR/SMRT complexIEA
R-HSA-9022692 Regulation of MECP2 expression and activityIEA
R-HSA-9024446 NR1H2 and NR1H3-mediated signalingTAS
R-HSA-9029569 NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and effluxTAS
R-HSA-9609646 HCMV InfectionTAS
R-HSA-9609690 HCMV Early EventsTAS
R-HSA-9623433 NR1H2 & NR1H3 regulate gene expression to control bile acid homeostasisTAS

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0007 Acetylation
KW-0025 Alternative splicing
KW-0175 Coiled coil
KW-0238 DNA-binding
KW-1017 Isopeptide bond
KW-0488 Methylation
KW-0539 Nucleus
KW-0597 Phosphoprotein
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0677 Repeat
KW-0678 Repressor
KW-0804 Transcription
KW-0805 Transcription regulation
KW-0832 Ubl conjugation

Interpro

InterPro ID InterPro Term
IPR009057 Homeobox-like_sf
IPR031557 N-CoR_GPS2_interact
IPR001005 SANT/Myb
IPR017884 SANT_dom

PROSITE

PROSITE ID PROSITE Term
PS51293 SANT

Pfam

Pfam ID Pfam Term
PF15784 GPS2_interact
PF00249 Myb_DNA-binding

Protein-protein interaction

Protein-miRNA interaction