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Gene Information
Gene ID:14412
Full Name:solute carrier family 6 (neurotransmitter transporter, GABA), member 13
Organism:Mus musculus (Mouse)
Genetic Location:6 F1
Physical Location:121250313-121287735 on NC_000072.5
Gene Type:protein-coding
Human Ortholog:GeneID: 6540    Symbol (Name): SLC6A13 (solute carrier family 6 (neurotransmitter transporter, GABA), member 13)
Ortholog Status:The human GeneID 6540 is also in human dataset(s).
Gene in Ethanol Study Datasets
Gene Information
Original ID1:AA673769
Note:Differences expression in alcohol-preferring and alcohol-nonpreferring mouse strains
Dataset Information
Phenotype:Alcohol-nonpreferring, alcohol-preferring, alcohol self-administration
Publication:Saito et al. Alcohol. (2004) Mouse striatal transcriptome analysis: effects of oral self-administration of alcohol. PubMed
Summary:Aiming to define pathways among genomic, neural, and behavioral determinants of addiction, we investigated global striatal gene expression in a paradigm of oral self-administration of alcohol by using genomically very similar alcohol-nonpreferring B6.Cb(5)i(7)-alpha 3/Vad (C5A3) and alcohol-preferring B6.Ib(5)i(7)-beta 25A/Vad (I5B25A) quasi-congenic mouse strains and their progenitors, C57BL/6By (B6By) and BALB/cJ. Expression of 12,488 genes and expressed sequence tags (ESTs) was studied by using 24 high-density oligonucleotide microarrays. As expected, striatal transcriptome differences were far more extensive between the independently derived progenitor strains than between the quasi-congenic strains and their background partner, B6By.
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
NM_144512.2NP_653095.1NC_000072.5 range: 121250313..121287735
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0005887integral to plasma membraneCellular ComponentIEA
GO:0016020membraneCellular ComponentIEA
GO:0016021integral to membraneCellular ComponentIEA
GO:0005328neurotransmitter:sodium symporter activityMolecular FunctionIEA
GO:0005332gamma-aminobutyric acid:sodium symporter activityMolecular FunctionIEA
GO:0015293symporter activityMolecular FunctionIEA
GO:0006810transportBiological ProcessIEA
GO:0006836neurotransmitter transportBiological ProcessIEA
Other Database Cross Links
NCBI Entrez Gene:14412