| Gene Information |
| Gene ID: | | 233802 |
| Symbol: | | Thumpd1 |
| Full Name: | | THUMP domain containing 1 |
| Alias: | | 6330575P11Rik|MGC7161 |
| Organism: | | Mus musculus (Mouse) |
| Chromosome: | | 7 |
| Genetic Location: | | 7 F2|7 59.0 cM |
| Physical Location: | | 126858606-126864278 on NC_000073.5, complement |
| Gene Type: | | protein-coding |
| Human Ortholog: | | GeneID: 55623 Symbol (Name): THUMPD1 (THUMP domain containing 1) |
| Ortholog Status: | | The human GeneID 55623 is not in current human dataset. |
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| Gene in Ethanol Study Datasets |
| Gene Information | | Original ID1: | | AI851052 | | Note: | | Differences expression in alcohol-preferring and alcohol-nonpreferring mouse strains |
| | Dataset Information | | Name: | | 15282116 | | Method: | | Microarray | | Tissue: | | Striata | | Phenotype: | | Alcohol-nonpreferring, alcohol-preferring, alcohol self-administration | | Publication: | | Saito et al. Alcohol. (2004) Mouse striatal transcriptome analysis: effects of oral self-administration of alcohol. PubMed | | Summary: | | Aiming to define pathways among genomic, neural, and behavioral determinants of addiction, we investigated global striatal gene expression in a paradigm of oral self-administration of alcohol by using genomically very similar alcohol-nonpreferring B6.Cb(5)i(7)-alpha 3/Vad (C5A3) and alcohol-preferring B6.Ib(5)i(7)-beta 25A/Vad (I5B25A) quasi-congenic mouse strains and their progenitors, C57BL/6By (B6By) and BALB/cJ. Expression of 12,488 genes and expressed sequence tags (ESTs) was studied by using 24 high-density oligonucleotide microarrays. As expected, striatal transcriptome differences were far more extensive between the independently derived progenitor strains than between the quasi-congenic strains and their background partner, B6By. |
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| Gene Refseq Sequence Annotation |
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| Gene Ontology (GO) Annotation |
| GO ID | GO Term | Category | Evidence (PubMed) | |
| GO:0005575 | cellular_component | Cellular Component | ND | |
| GO:0003674 | molecular_function | Molecular Function | ND | |
| GO:0008150 | biological_process | Biological Process | ND | |
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| Other Database Cross Links |
| NCBI Entrez Gene: | | 233802 |
| MGI: | |
| Ensembl: | | ENSMUSG00000030942 |
| dbSNP: | | Thumpd1 |
| AceView: | | Thumpd1 |
