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Gene Information
Gene ID:296655
Symbol:Stom
Full Name:stomatin
Organism:Rattus norvegicus (Rat)
Chromosome:3
Genetic Location:3p11
Physical Location:14392977-14415287 on NC_005102.2, complement
Gene Type:protein-coding
Human Ortholog:GeneID: 2040    Symbol (Name): STOM (stomatin)
Ortholog Status:The human GeneID 2040 is also in human dataset(s).
Gene in Ethanol Study Datasets
Gene Information
Original ID1:Stom
Fold Change:1.21
P Value:0.008
Note:Differential expression between ethanol and water groups in amygdala
Dataset Information
Name:18405950
Method:Microarray
Tissue:Nucleus accumbens and amygdala
Phenotype:Ethanol self-administration, alcohol-preferring
Publication:Rodd et al. Pharmacol Biochem Behav. (2008) Differential gene expression in the nucleus accumbens with ethanol self-administration in inbred alcohol-preferring rats. PubMed
Summary:The current study examined the effects of operant ethanol (EtOH) self-administration on gene expression kin the nucleus accumbens (ACB) and amygdala (AMYG) of inbred alcohol-preferring (iP) rats. Rats self-trained on a standard two-lever operant paradigm to administer either water-water, EtOH (15% v/v)-water, or saccharin (SAC; 0.0125% g/v)-water. For the ACB, there were 513 significant differences at the p < 0.01 level in named genes: 55 between SAC and water; 215 between EtOH and water, and 243 between EtOH and SAC. In the case of the AMYG (p < 0.01), there were 48 between SAC and water, 23 between EtOH and water, and 63 between EtOH and SAC group.
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
NM_001011965.1NP_001011965.1NC_005102.2 range: 14392977..14415287, complement
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0005575cellular_componentCellular ComponentND
GO:0005856cytoskeletonCellular ComponentISS
GO:0005887integral to plasma membraneCellular ComponentISS
GO:0016020membraneCellular ComponentIEA
GO:0045121membrane raftCellular ComponentISS
GO:0005515protein bindingMolecular FunctionIDA (10562431)
GO:0008150biological_processBiological ProcessND
GO:0051260protein homooligomerizationBiological ProcessISS
Other Database Cross Links
NCBI Entrez Gene:296655
RGD:1305109
Ensembl:ENSRNOG00000019147
dbSNP:Stom