ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Ppp3r1

Full Name:

protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)

Organism:

Rattus norvegicus (Rat)

Chromosome:

Genetic Location:

14q22

Physical Location:

98060301-98099091 on NC_005113.2

Gene Type:

protein-coding

Human Ortholog:

GeneID: 5534 Symbol (Name): PPP3R1 (protein phosphatase 3 (formerly 2B), regulatory subunit B, alpha isoform)

Ortholog Status:

The human GeneID 5534 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Original ID1:		Ppp3r1
Fold Change:		-1.29
P Value:		0.004
Note:		Differential expression between ethanol and saccharin groups in nucleus accumbens

Dataset Information

Name:		18405950
Method:		Microarray
Tissue:		Nucleus accumbens and amygdala
Phenotype:		Ethanol self-administration, alcohol-preferring
Publication:		Rodd et al. Pharmacol Biochem Behav. (2008) Differential gene expression in the nucleus accumbens with ethanol self-administration in inbred alcohol-preferring rats. PubMed
Summary:		The current study examined the effects of operant ethanol (EtOH) self-administration on gene expression kin the nucleus accumbens (ACB) and amygdala (AMYG) of inbred alcohol-preferring (iP) rats. Rats self-trained on a standard two-lever operant paradigm to administer either water-water, EtOH (15% v/v)-water, or saccharin (SAC; 0.0125% g/v)-water. For the ACB, there were 513 significant differences at the p < 0.01 level in named genes: 55 between SAC and water; 215 between EtOH and water, and 243 between EtOH and SAC. In the case of the AMYG (p < 0.01), there were 48 between SAC and water, 23 between EtOH and water, and 63 between EtOH and SAC group.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_017309.2	NP_059005.1	NC_005113.2 range: 98060301..98099091

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0004721	phosphoprotein phosphatase activity	Molecular Function	IDA (12135494)
GO:0005515	protein binding	Molecular Function	IPI (15120593)
GO:0005515	protein binding	Molecular Function	ISS
GO:0001837	epithelial to mesenchymal transition	Biological Process	ISS
GO:0006470	protein amino acid dephosphorylation	Biological Process	IDA (12135494)
GO:0007507	heart development	Biological Process	ISS