ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

CG3011

Alias:

144561_at

Organism:

Drosophila melanogaster (Fly)

Chromosome:

Genetic Location:

5C7-5C7

Physical Location:

5807098-5810825 on NC_004354.3, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 6472 Symbol (Name): SHMT2 (serine hydroxymethyltransferase 2 (mitochondrial))

Ortholog Status:

The human GeneID 6472 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Original ID1:		CG3011
P Value:		6.14E-03
Note:		Slow up-regulation, have human and mouse orthologs.

Dataset Information

Name:		17054780
Method:		Microarray
Phenotype:		Ethanol response
Publication:		Morozova et al. Genome Biol. (2006) Transcriptional response to alcohol exposure in Drosophila melanogaster. PubMed
Summary:		We assessed whole-genome transcriptional responses following alcohol exposure and demonstrate immediate down-regulation of genes affecting olfaction, rapid upregulation of biotransformation enzymes and, concomitant with development of tolerance, altered transcription of transcriptional regulators, proteases and metabolic enzymes, including biotransformation enzymes and enzymes associated with fatty acid biosynthesis. Functional tests of P-element disrupted alleles corresponding to genes with altered transcription implicated 75% of these in the response to alcohol, two-thirds of which have human orthologues. We performed analysis of variance to identify probe sets with significant differences in expression between the three treatments, and a false positive discovery rate of q < 0.05 to account for multiple tests.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_132050.1	NP_572278.1	NC_004354.3 range: 5807098..5810825, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005739	mitochondrion	Cellular Component	ISS
GO:0004372	glycine hydroxymethyltransferase activity	Molecular Function	ISS
GO:0030170	pyridoxal phosphate binding	Molecular Function	IEA
GO:0006544	glycine metabolic process	Biological Process	IEA
GO:0006564	L-serine biosynthetic process	Biological Process	ISS