ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

CG11266

Alias:

CAPER|CC1.3|HCC1

Organism:

Drosophila melanogaster (Fly)

Chromosome:

Genetic Location:

27D5-27D5

Physical Location:

7032712-7037619 on NT_033779.4

Gene Type:

protein-coding

Human Ortholog:

GeneID: 9584 Symbol (Name): RBM39 (RNA binding motif protein 39)

Ortholog Status:

The human GeneID 9584 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Original ID1:		CG11266
P Value:		1.67E-02
Note:		Acute up-regulation, have human and mouse orthologs.

Dataset Information

Name:		17054780
Method:		Microarray
Phenotype:		Ethanol response
Publication:		Morozova et al. Genome Biol. (2006) Transcriptional response to alcohol exposure in Drosophila melanogaster. PubMed
Summary:		We assessed whole-genome transcriptional responses following alcohol exposure and demonstrate immediate down-regulation of genes affecting olfaction, rapid upregulation of biotransformation enzymes and, concomitant with development of tolerance, altered transcription of transcriptional regulators, proteases and metabolic enzymes, including biotransformation enzymes and enzymes associated with fatty acid biosynthesis. Functional tests of P-element disrupted alleles corresponding to genes with altered transcription implicated 75% of these in the response to alcohol, two-thirds of which have human orthologues. We performed analysis of variance to identify probe sets with significant differences in expression between the three treatments, and a false positive discovery rate of q < 0.05 to account for multiple tests.

Gene Refseq Sequence Annotation

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IC (15492211)
GO:0005681	spliceosome	Cellular Component	ISS
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0003723	RNA binding	Molecular Function	IEA
GO:0003729	mRNA binding	Molecular Function	ISS (10908586)
GO:0000381	regulation of alternative nuclear mRNA splicing, via spliceosome	Biological Process	IMP (15492211)
GO:0008380	RNA splicing	Biological Process	ISS