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Gene Information
Gene ID:363278
Symbol:Atg16l1
Full Name:autophagy-related 16-like 1 (yeast)
Alias:Apg16l|Wdr30
Organism:Rattus norvegicus (Rat)
Chromosome:9
Genetic Location:9q35
Physical Location:86711964-86747372 on NC_005108.2
Gene Type:protein-coding
Human Ortholog:GeneID: 55054    Symbol (Name): ATG16L1 (ATG16 autophagy related 16-like 1 (S. cerevisiae))
Ortholog Status:The human GeneID 55054 is not in current human dataset.
Gene in Ethanol Study Datasets
Gene Information
Original ID1:Rn.8130
Fold Change:1.23
P Value:0.00257
Note:Lower levels in the hippocampus of iP than iNP rats
Dataset Information
Name:15660665
Method:Microarray
Tissue:Hippocampus
Phenotype:Alcohol-preferring, alcohol-nonpreferring
Publication:Edenberg et al. Genes Brain Behav. (2005) Gene expression in the hippocampus of inbred alcohol-preferring and -nonpreferring rats. PubMed
Summary:The objective of this study was to test the hypothesis that there are innate differences in gene expression in the hippocampus of inbred alcohol-preferring (iP) and -nonpreferring (iNP) rats that may contribute to differences in sensitivity to ethanol and/or in the development of tolerance. Affymetrix microarrays were used to measure gene expression in the hippocampus of alcohol-naive male iP and iNP rats in two experiments (n = 4 and 6 per strain in the two experiments). Combining data from the two experiments, there were 137 probesets representing 129 genes that significantly differed (P ? 0.01).
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
XM_343619.3XP_343620.3NC_005108.2 range: 86711964..86747372
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0005575cellular_componentCellular ComponentND
GO:0005776autophagic vacuoleCellular ComponentISS
GO:0003674molecular_functionMolecular FunctionND
GO:0005515protein bindingMolecular FunctionISS
GO:0008150biological_processBiological ProcessND
Other Database Cross Links
NCBI Entrez Gene:363278
RGD:1310631
Ensembl:ENSRNOG00000017913
dbSNP:Atg16l1