ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

ATP9B

Full Name:

ATPase, class II, type 9B

Alias:

ATPASEP|ATPIIB|DKFZp686H2093|FLJ46612|HUSSY-20|MGC150650|MGC150651|MGC61572|NEO1L

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

18q23

Physical Location:

74930384-75239270 on NC_000018.8

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Dataset Information

Name:		12774316
Method:		Microarray
Tissue:		Temporal cortex
Phenotype:		Alcohol dependence (AD)/Alcohol abuse/Alcoholism
Publication:		Sokolov et al. J Neurosci Res. (2003) Transcription profiling reveals mitochondrial, ubiquitin and signaling systems abnormalities in postmortem brains from subjects with a history of alcohol abuse or dependence. PubMed
Summary:		To identify candidate mechanisms for alcohol abuse, the expression of 12,626 genes was measured in postmortem temporal cortex from 11 subjects with a history of alcohol abuse or dependence, with or without other psychiatric diagnoses and compared pairwise with the expression in 11 nonalcoholic subjects matched for the other psychiatric diagnoses and demographics. Genes were defined to have altered expression in alcohol abuse if: 1) the gene showed decreased expression in at least 10 of 11 subjects with alcohol abuse, or showed increased expression in at least 10 of 11 subjects with this diagnosis compared to matched non-abusers (P<0.007, X2test); or 2) the difference in the mean abuser/non-abuser ratio for the gene from value of 1.0 was significant at P<0.05 (one sample t-test). In subjects with a history of alcohol abuse or dependence, 163 genes were changed significantly.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_198531.3	NP_940933.3	NC_000018.8 range: 74930384..75239270

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0016021	integral to membrane	Cellular Component	NAS
GO:0016020	membrane	Cellular Component	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0015662	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	Molecular Function	IEA
GO:0005524	ATP binding	Molecular Function	NAS
GO:0005524	ATP binding	Molecular Function	IEA
GO:0004012	phospholipid-translocating ATPase activity	Molecular Function	IEA
GO:0000287	magnesium ion binding	Molecular Function	IEA
GO:0019829	cation-transporting ATPase activity	Molecular Function	NAS
GO:0006810	transport	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0015914	phospholipid transport	Biological Process	IEA
GO:0015917	aminophospholipid transport	Biological Process	NAS