ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

PPP3CC

Full Name:

protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform

Alias:

CALNA3

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

8p21.3

Physical Location:

22354540-22454582 on NC_000008.9

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Dataset Information

Name:		12774316
Method:		Microarray
Tissue:		Temporal cortex
Phenotype:		Alcohol dependence (AD)/Alcohol abuse/Alcoholism
Publication:		Sokolov et al. J Neurosci Res. (2003) Transcription profiling reveals mitochondrial, ubiquitin and signaling systems abnormalities in postmortem brains from subjects with a history of alcohol abuse or dependence. PubMed
Summary:		To identify candidate mechanisms for alcohol abuse, the expression of 12,626 genes was measured in postmortem temporal cortex from 11 subjects with a history of alcohol abuse or dependence, with or without other psychiatric diagnoses and compared pairwise with the expression in 11 nonalcoholic subjects matched for the other psychiatric diagnoses and demographics. Genes were defined to have altered expression in alcohol abuse if: 1) the gene showed decreased expression in at least 10 of 11 subjects with alcohol abuse, or showed increased expression in at least 10 of 11 subjects with this diagnosis compared to matched non-abusers (P<0.007, X2test); or 2) the difference in the mean abuser/non-abuser ratio for the gene from value of 1.0 was significant at P<0.05 (one sample t-test). In subjects with a history of alcohol abuse or dependence, 163 genes were changed significantly.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_005605.3	NP_005596.2	NC_000008.9 range: 22354540..22454582

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005829	cytosol	Cellular Component	EXP (10195903)
GO:0005955	calcineurin complex	Cellular Component	NR
GO:0004721	phosphoprotein phosphatase activity	Molecular Function	IEA
GO:0005506	iron ion binding	Molecular Function	IEA
GO:0005516	calmodulin binding	Molecular Function	IEA
GO:0008270	zinc ion binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0008633	activation of pro-apoptotic gene products	Biological Process	EXP (15231831)