ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

SYP

Full Name:

synaptophysin

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

Xp11.23-p11.22

Physical Location:

48931208-48943604 on NC_000023.9, complement

Gene Type:

protein-coding

Orthologs:

This gene has Mouse: 20977 ortholog(s) in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

SYP

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_003179.2	NP_003170.1	NC_000023.9 range: 48931208..48943604, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0030285	integral to synaptic vesicle membrane	Cellular Component	NAS (1975480)
GO:0030054	cell junction	Cellular Component	IEA
GO:0019717	synaptosome	Cellular Component	IEA
GO:0045202	synapse	Cellular Component	IEA
GO:0008021	synaptic vesicle	Cellular Component	IEA
GO:0031410	cytoplasmic vesicle	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0015485	cholesterol binding	Molecular Function	IDA (10620806)
GO:0005515	protein binding	Molecular Function	NAS (10620806)
GO:0005509	calcium ion binding	Molecular Function	NAS
GO:0005215	transporter activity	Molecular Function	IEA
GO:0016188	synaptic vesicle maturation	Biological Process	NAS (10620806)
GO:0006810	transport	Biological Process	IEA
GO:0048499	synaptic vesicle membrane organization and biogenesis	Biological Process	NAS (10620806)