ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Cthrc1

Full Name:

collagen triple helix repeat containing 1

Alias:

1110014B07Rik

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

15 C

Physical Location:

38908477-38918664 on NC_000081.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 115908 Symbol (Name): CTHRC1 (collagen triple helix repeat containing 1)

Ortholog Status:

The human GeneID 115908 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Dataset Information

Name:		16465594
Method:		Microarray and QTL
Tissue:		Cerebellum
Phenotype:		Ethanol sensitivity
Publication:		MacLaren et al. Mamm Genome. (2006) Expression profiling identifies novel candidate genes for ethanol sensitivity QTLs. PubMed
Summary:		The Inbred Long Sleep (ILS) and Inbred Short Sleep (ISS) mouse strains have a 16-fold difference in duration of loss of the righting response (LORR) following administration of a sedative dose of ethanol. Four quantitative trait loci (QTLs) have been mapped in these strains for this trait. Genome-wide expression profiling in cerebellum was used here to identify candidate genes for regulatory region differences in these two strains. Fifteen differentially expressed genes were found that map to the QTL regions.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_026778.2	NP_081054.1	NC_000081.5 range: 38908477..38918664

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005575	cellular_component	Cellular Component	ND
GO:0005576	extracellular region	Cellular Component	IEA
GO:0005578	proteinaceous extracellular matrix	Cellular Component	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0003674	molecular_function	Molecular Function	ND
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0006817	phosphate transport	Biological Process	IEA
GO:0008150	biological_process	Biological Process	ND