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Gene Information
Gene ID:68588
Full Name:collagen triple helix repeat containing 1
Organism:Mus musculus (Mouse)
Genetic Location:15 C
Physical Location:38908477-38918664 on NC_000081.5
Gene Type:protein-coding
Human Ortholog:GeneID: 115908    Symbol (Name): CTHRC1 (collagen triple helix repeat containing 1)
Ortholog Status:The human GeneID 115908 is not in current human dataset.
Gene in Ethanol Study Datasets
Gene Information
Original ID1:Cthrc1
Fold Change:3.2
Note:More highly expressed in ILS
Dataset Information
Method:Microarray and QTL
Phenotype:Ethanol sensitivity
Publication:MacLaren et al. Mamm Genome. (2006) Expression profiling identifies novel candidate genes for ethanol sensitivity QTLs. PubMed
Summary:The Inbred Long Sleep (ILS) and Inbred Short Sleep (ISS) mouse strains have a 16-fold difference in duration of loss of the righting response (LORR) following administration of a sedative dose of ethanol. Four quantitative trait loci (QTLs) have been mapped in these strains for this trait. Genome-wide expression profiling in cerebellum was used here to identify candidate genes for regulatory region differences in these two strains. Fifteen differentially expressed genes were found that map to the QTL regions.
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
NM_026778.2NP_081054.1NC_000081.5 range: 38908477..38918664
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0005575cellular_componentCellular ComponentND
GO:0005576extracellular regionCellular ComponentIEA
GO:0005578proteinaceous extracellular matrixCellular ComponentIEA
GO:0005737cytoplasmCellular ComponentIEA
GO:0003674molecular_functionMolecular FunctionND
GO:0005198structural molecule activityMolecular FunctionIEA
GO:0006817phosphate transportBiological ProcessIEA
GO:0008150biological_processBiological ProcessND
Other Database Cross Links
NCBI Entrez Gene:68588