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Gene Information
Gene ID:688848
Full Name:testis specific gene A13
Organism:Rattus norvegicus (Rat)
Genetic Location:4q22
Physical Location:57958546-57973210 on NC_005103.2, complement
Gene Type:protein-coding
Human Ortholog:GeneID: 114960    Symbol (Name): TSGA13 (testis specific, 13)
Ortholog Status:The human GeneID 114960 is not in current human dataset.
Gene in Ethanol Study Datasets
Gene Information
Original ID1:Tsga13
Fold Change:-1.32
P Value:0
Gene Information
Original ID1:Tsga13
Fold Change:-1.26
P Value:0.0002
Tissue:Frontal cortex
Gene Information
Original ID1:Tsga13
Fold Change:-1.25
P Value:0.0008
Tissue:Nucleus accumbens
Gene Information
Original ID1:Tsga13
Fold Change:-1.21
P Value:0.0014
Dataset Information
Method:Microarray and QTL
Tissue:Nucleus accumbens, frontal cortex, amygdala, hippocampus, and striatum
Phenotype:Alcohol Preference, alcohol-preferring, alcohol-nonpreferring
Publication:Carr et al. Alcohol Clin Exp Res. (2007) Identification of candidate genes for alcohol preference by expression profiling of congenic rat strains. PubMed
Summary:A highly significant quantitative trait locus (QTL) on chromosome 4 that influenced alcohol preference was identified by analyzing crosses between the iP (inbred alcohol-preferring) and iNP (inbred alcohol-nonpreferring) rats. Congenic strains in which the iP chromosome 4 QTL interval was transferred to the iNP (NP.P) exhibited the expected increase in alcohol consumption compared with the iNP background strain. Analyses within individual brain regions that focused on genes within the QTL interval detected differential expression in all 5 brain regions; a total of 35 genes were detected in at least 1 region, ranging from 6 genes in the nucleus accumbens to 22 in the frontal cortex.
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
XM_001068562.1XP_001068562.1NC_005103.2 range: 57958546..57973210, complement
Other Database Cross Links
NCBI Entrez Gene:688848