ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

VCP

Full Name:

valosin-containing protein

Alias:

IBMPFD|MGC131997|MGC148092|MGC8560|TERA|p97

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

9p13.3

Physical Location:

35046559-35062563 on NC_000009.10, complement

Gene Type:

protein-coding

Orthologs:

This gene has Fly: 36040 ortholog(s) in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

VCP

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_007126.3	NP_009057.1	NC_000009.10 range: 35046559..35062563, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005829	cytosol	Cellular Component	IDA (10855792\|15215856)
GO:0005634	nucleus	Cellular Component	IDA (10855792)
GO:0005634	nucleus	Cellular Component	TAS (16130169)
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IDA (15215856)
GO:0005792	microsome	Cellular Component	ISS
GO:0016887	ATPase activity	Molecular Function	TAS (15215856)
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0008289	lipid binding	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005524	ATP binding	Molecular Function	IEA
GO:0005524	ATP binding	Molecular Function	IC (15215856)
GO:0005515	protein binding	Molecular Function	IPI (10855792\|15215856\|15743842\|16449189\|17681147)
GO:0017111	nucleoside-triphosphatase activity	Molecular Function	IEA
GO:0042981	regulation of apoptosis	Biological Process	TAS (16130169)
GO:0030970	retrograde protein transport, ER to cytosol	Biological Process	IDA (15215856)
GO:0030968	unfolded protein response	Biological Process	TAS (15215856)
GO:0030433	ER-associated protein catabolic process	Biological Process	TAS (15215856)
GO:0016567	protein ubiquitination	Biological Process	NAS (15215856)
GO:0006919	caspase activation	Biological Process	ISS
GO:0006810	transport	Biological Process	IEA
GO:0006302	double-strand break repair	Biological Process	IDA (10855792)
GO:0045184	establishment of protein localization	Biological Process	TAS (15215856)