ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Tsc22d3

Full Name:

TSC22 domain family 3

Alias:

Dsipi|Gilz

Organism:

Rattus norvegicus (Rat)

Chromosome:

Genetic Location:

Xq35

Physical Location:

128336407-128340026 on NC_005120.2, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 1831 Symbol (Name): TSC22D3 (TSC22 domain family, member 3)

Ortholog Status:

The human GeneID 1831 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Original ID1:		Tsc22d3
Fold Change:		1.15
P Value:		0.002
Note:		Differential expression between ethanol and saccharin groups in amygdala

Dataset Information

Name:		18405950
Method:		Microarray
Tissue:		Nucleus accumbens and amygdala
Phenotype:		Ethanol self-administration, alcohol-preferring
Publication:		Rodd et al. Pharmacol Biochem Behav. (2008) Differential gene expression in the nucleus accumbens with ethanol self-administration in inbred alcohol-preferring rats. PubMed
Summary:		The current study examined the effects of operant ethanol (EtOH) self-administration on gene expression kin the nucleus accumbens (ACB) and amygdala (AMYG) of inbred alcohol-preferring (iP) rats. Rats self-trained on a standard two-lever operant paradigm to administer either water-water, EtOH (15% v/v)-water, or saccharin (SAC; 0.0125% g/v)-water. For the ACB, there were 513 significant differences at the p < 0.01 level in named genes: 55 between SAC and water; 215 between EtOH and water, and 243 between EtOH and SAC. In the case of the AMYG (p < 0.01), there were 48 between SAC and water, 23 between EtOH and water, and 63 between EtOH and SAC group.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_031345.1	NP_112635.1	NC_005120.2 range: 128336407..128340026, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0003700	transcription factor activity	Molecular Function	IEA
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0006916	anti-apoptosis	Biological Process	IEA
GO:0006916	anti-apoptosis	Biological Process	ISS
GO:0006970	response to osmotic stress	Biological Process	ISS
GO:0007589	body fluid secretion	Biological Process	IEP (12707381)