ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

PKMYT1

Full Name:

protein kinase, membrane associated tyrosine/threonine 1

Alias:

DKFZp547K1610|FLJ20093|MYT1

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

16p13.3

Physical Location:

2962792-2970474 on NC_000016.8, complement

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Dataset Information

Name:		12774316
Method:		Microarray
Tissue:		Temporal cortex
Phenotype:		Alcohol dependence (AD)/Alcohol abuse/Alcoholism
Publication:		Sokolov et al. J Neurosci Res. (2003) Transcription profiling reveals mitochondrial, ubiquitin and signaling systems abnormalities in postmortem brains from subjects with a history of alcohol abuse or dependence. PubMed
Summary:		To identify candidate mechanisms for alcohol abuse, the expression of 12,626 genes was measured in postmortem temporal cortex from 11 subjects with a history of alcohol abuse or dependence, with or without other psychiatric diagnoses and compared pairwise with the expression in 11 nonalcoholic subjects matched for the other psychiatric diagnoses and demographics. Genes were defined to have altered expression in alcohol abuse if: 1) the gene showed decreased expression in at least 10 of 11 subjects with alcohol abuse, or showed increased expression in at least 10 of 11 subjects with this diagnosis compared to matched non-abusers (P<0.007, X2test); or 2) the difference in the mean abuser/non-abuser ratio for the gene from value of 1.0 was significant at P<0.05 (one sample t-test). In subjects with a history of alcohol abuse or dependence, 163 genes were changed significantly.

Gene Refseq Sequence Annotation

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005783	endoplasmic reticulum	Cellular Component	TAS (9001210)
GO:0000139	Golgi membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005794	Golgi apparatus	Cellular Component	TAS (9001210)
GO:0005789	endoplasmic reticulum membrane	Cellular Component	IEA
GO:0005624	membrane fraction	Cellular Component	TAS (9001210)
GO:0005654	nucleoplasm	Cellular Component	EXP (12738781)
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005524	ATP binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IPI (10373560)
GO:0004674	protein serine/threonine kinase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0006468	protein amino acid phosphorylation	Biological Process	IEA
GO:0007049	cell cycle	Biological Process	IEA
GO:0007088	regulation of mitosis	Biological Process	TAS (9001210)
GO:0000079	regulation of cyclin-dependent protein kinase activity	Biological Process	TAS (9001210)