| Gene Information |
| Gene ID: | | 9752 |
| Symbol: | | PCDHA9 |
| Full Name: | | protocadherin alpha 9 |
| Alias: | | KIAA0345|PCDH-ALPHA9 |
| Organism: | | Homo sapiens (Human) |
| Chromosome: | | 5 |
| Genetic Location: | | 5q31 |
| Physical Location: | | 140207540-140372112 on NC_000005.8 |
| Gene Type: | | protein-coding |
| Orthologs: | | This gene has no orthologs in other dataset(s). |
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| Gene in Ethanol Study Datasets |
| Gene Information | | Original ID1: | | AB002343 | | Fold Change: | | 2.62 | | P Value: | | 0.037 |
| | Dataset Information | | Name: | | 12774316 | | Method: | | Microarray | | Tissue: | | Temporal cortex | | Phenotype: | | Alcohol dependence (AD)/Alcohol abuse/Alcoholism | | Publication: | | Sokolov et al. J Neurosci Res. (2003) Transcription profiling reveals mitochondrial, ubiquitin and signaling systems abnormalities in postmortem brains from subjects with a history of alcohol abuse or dependence. PubMed | | Summary: | | To identify candidate mechanisms for alcohol abuse, the expression of 12,626 genes was measured in postmortem temporal cortex from 11 subjects with a history of alcohol abuse or dependence, with or without other psychiatric diagnoses and compared pairwise with the expression in 11 nonalcoholic subjects matched for the other psychiatric diagnoses and demographics. Genes were defined to have altered expression in alcohol abuse if: 1) the gene showed decreased expression in at least 10 of 11 subjects with alcohol abuse, or showed increased expression in at least 10 of 11 subjects with this diagnosis compared to matched non-abusers (P<0.007, X2test); or 2) the difference in the mean abuser/non-abuser ratio for the gene from value of 1.0 was significant at P<0.05 (one sample t-test). In subjects with a history of alcohol abuse or dependence, 163 genes were changed significantly. |
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| Gene Refseq Sequence Annotation |
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| Gene Ontology (GO) Annotation |
| GO ID | GO Term | Category | Evidence (PubMed) | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0016021 | integral to membrane | Cellular Component | IEA | |
| GO:0005509 | calcium ion binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0007155 | cell adhesion | Biological Process | IEA | |
| GO:0007156 | homophilic cell adhesion | Biological Process | IEA | |
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| Other Database Cross Links |
| NCBI Entrez Gene: | | 9752 |
| HGNC: | | 8675 |
| Ensembl: | | ENSG00000204961 |
| MIM: | | 606315 |
| HPRD: | | 07327 |
| HuGE Navigator: | | 9752 |
| dbSNP: | | PCDHA9 |
| GeneCard: | | PCDHA9 |
| AceView: | | PCDHA9 |
