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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory

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TissGeneSummary

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TissGeneExp

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TissGene-miRNA

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TissGeneMut: TissGeneSNV, TissGeneCNV, and TissGeneFusions

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TissGeneNet

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TissGeneProg

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TissGeneClin: TissGeneDrug and TissGeneDisease

TissGeneSummary for MASP2
check button Gene summary
Basic gene informationGene symbolMASP2
Gene namemannan-binding lectin serine peptidase 2
SynonymsMAP19|MASP-2|MASP1P1|sMAP
CytomapUCSC genome browser: 1p36.3-p36.2
Type of geneprotein-coding
RefGenesNM_006610.3,
NM_139208.2,
DescriptionMBL-associated plasma protein of 19 kDMBL-associated serine protease 2mannan-binding lectin serine peptidase 1 pseudogene 1mannan-binding lectin serine protease 1 pseudogene 1mannan-binding lectin serine protease 2mannose-binding protein-associated s
Modification date20141221
dbXrefs MIM : 605102
HGNC : HGNC
Ensembl : ENSG00000009724
HPRD : 05484
Vega : OTTHUMG00000002121
ProteinUniProt:
go to UniProt's Cross Reference DB Table
ExpressionCleanEX: HS_MASP2
BioGPS: 10747
PathwayNCI Pathway Interaction Database: MASP2
KEGG: MASP2
REACTOME: MASP2
Pathway Commons: MASP2
ContextiHOP: MASP2
ligand binding site mutation search in PubMed: MASP2
UCL Cancer Institute: MASP2
Assigned class in TissGDB*B
Included tissue-specific gene expression resourcesHPA,TiGER,GTEx
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx)Liver
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA)LIHC
Reference showing the relevant tissue of MASP2
Description by TissGene annotationsUnique usage of specific isoform
Cancer gene
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C.

check button Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez
GO IDGO termPubMed ID
GO:0001867complement activation, lectin pathway17182967
GO:0001867complement activation, lectin pathway17182967


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TissGeneExp for MASP2

check button Gene expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
gene exp


check button Gene isoform expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01)
gene isoform exp


check button Gene expressions across normal tissues of GTEx data
(GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct)
- Here, we shows the matched tissue types only among our 28 cancer types.
normal gene exp


check button Different expressions across 14 cancer types with more than 10 samples between matched tumors and normals (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
DEG exp

- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05)
Cancer typeMean(exp) in tumorMean(exp) in matched normalLog2FCP-val.FDR
LUAD-0.0439201321.206571248-1.2504913794.93E-102.72E-09
BRCA0.1794169221.859035343-1.6796184211.69E-282.04E-27
KIRP-0.4303197010.659242799-1.08956254.24E-061.90E-05
LUSC-0.2219076911.271733486-1.4936411762.36E-141.32E-13
LIHC7.7842397999.433869799-1.649630.0002980.000915433


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TissGene-miRNA for MASP2

check button Significantly anti-correlated miRNAs of TissGene across 28 cancer types
(Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016)
(TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21)
(TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16)
(Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25))
Cancer typemiRNA idmiRNA accessionP-val.Coeff.# samples


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TissGeneMut for MASP2
TissGeneSNV for MASP2

check button nsSNV counts per each loci.
Different colors of circles represent different cancer types. Circle size denotes number of samples.
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)

* Click on the image to enlarge it in a new window.
SNV lollipop
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check button Somatic nucleotide variants of TissGene across 28 cancer types
(X-axis: cancer type and Y-axis: % of mutated samples)
The numbers in parentheses are numbers of samples with mutation (nsSNVs).
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)
SNV distribution

- nsSNVs sorted by frequency.
AAchangeCancer type# samples
p.E521KLUAD2
p.Y379CPRAD1
p.P313HCOAD1
p.I267NLUAD1
p.E622*STAD1
p.P301LBLCA1
p.N308TBLCA1
p.R439HDLBC1
p.P101LSKCM1
p.R498QLUAD1
p.L320MTHYM1
p.W289XSKCM1
p.A492SSARC1
p.Q336XSTAD1
p.D355EUCEC1
p.Q298*LUAD1
p.R439SUCEC1
p.A316DUCEC1
p.R563GCOAD1
p.F258LUCEC1
p.E424*HNSC1
p.D120GOV1
p.R266MCOAD1
p.V172ISKCM1
p.A534TUCEC1
p.S209FSKCM1
p.E148KSKCM1
p.L472FGBM1
p.G625SSKCM1
p.S312LSKCM1
p.Y587NLUSC1
p.L246IUCEC1
p.D42NCESC1
p.P453SCOAD1
p.P383LSKCM1
p.R498XCOAD1
p.Y410NPRAD1
p.A145VSTAD1
p.A169TCOAD1
p.E622XSTAD1
p.R175HSTAD1
p.G568ESKCM1
p.G129RSKCM1
p.R376QCOAD1
p.G367SHNSC1
p.R56CBRCA1
p.R630TBLCA1
p.D685NSKCM1
p.C430SHNSC1
p.H292YSKCM1
p.W289*SKCM1
p.P605LLUAD1
p.R356WSKCM1
p.P264HLUAD1
p.R175HBLCA1
p.R583KSKCM1
p.E218KSKCM1
p.W418SKIRP1
p.N158SHNSC1
p.M1ILIHC1
p.S642RLIHC1
p.T524AHNSC1
p.A305POV1
p.M403IUCEC1
p.D407NSKCM1
p.E234QCESC1
p.R56HUCEC1
p.Q336*STAD1
p.P126LDLBC1
p.P257SSKCM1
p.S546COV1


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TissGeneCNV for MASP2

check button Copy number variations of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of CNV samples)
(TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16)
CNV


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TissGeneFusions for MASP2

check button Fusion genes including TissGene
(ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01)
DatabaseSrcCancer typeSampleFusion geneORF5'-gene BP3'-gene BP


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TissGeneNet for MASP2

check button Co-expressed gene networks based on protein-protein interaction data (CePIN)
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(PINA2 ppi data)
BRCA (tumor)BRCA (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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COAD (tumor)COAD (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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HNSC (tumor)HNSC (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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KICH (tumor)KICH (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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KIRC (tumor)KIRC (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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KIRP (tumor)KIRP (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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LIHC (tumor)LIHC (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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LUAD (tumor)LUAD (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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LUSC (tumor)LUSC (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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PRAD (tumor)PRAD (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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STAD (tumor)STAD (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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THCA (tumor)THCA (normal)
MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (tumor)MASP2, PITX3, FCN2, C4A, MBL2, MASP1, SERPING1, FCN1 (normal)
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TissGeneProg for MASP2

check button Kaplan-Meier plots with logrank tests of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image to enlarge it in a new window.
survival 1

check button Kaplan-Meier plots with logrank test of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 2

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 3

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 4

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TissGeneClin for MASP2
TissGeneDrug for MASP2

check button Drug information targeting TissGene
(DrugBank Version 5.0.6, 2017-04-01)
DrugBank IDDrug nameDrug activityDrug typeDrug status


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TissGeneDisease for MASP2

check button Disease information associated with TissGene
(DisGeNet, 2016-06-01)
Disease IDDisease name# pubmedsSource
umls:C0004610Bacteremia2GAD
umls:C0024305Lymphoma, Non-Hodgkin2BeFree,GAD
umls:C0032285Pneumonia2BeFree
umls:C0035436Rheumatic Fever2BeFree,GAD
umls:C0035439Rheumatic Heart Disease2BeFree,GAD
umls:C0041296Tuberculosis2BeFree
umls:C0042769Virus Diseases2BeFree
umls:C0155862Streptococcal pneumonia2CTD_human,GAD
umls:C0242966Systemic Inflammatory Response Syndrome2BeFree
umls:C0878544Cardiomyopathies2BeFree
umls:C2239176Liver carcinoma2BeFree,GAD
umls:C0002736Amyotrophic Lateral Sclerosis1BeFree
umls:C0003873Rheumatoid Arthritis1BeFree
umls:C0004153Atherosclerosis1GAD
umls:C0004623Bacterial Infections1GAD
umls:C0004626Pneumonia, Bacterial1GAD
umls:C0007786Brain Ischemia1GAD
umls:C0009324Ulcerative Colitis1CTD_human
umls:C0009404Colorectal Neoplasms1LHGDN
umls:C0010346Crohn Disease1LHGDN
umls:C0010674Cystic Fibrosis1LHGDN
umls:C0014742Erythema Multiforme1CTD_human
umls:C0015672Fatigue1BeFree
umls:C0018133Graft-vs-Host Disease1BeFree
umls:C0019693HIV Infections1BeFree,GAD
umls:C0020951Immune Complex Diseases1CTD_human
umls:C0021368Inflammation1CTD_human
umls:C0023343Leprosy1BeFree
umls:C0023348Leprosy, Lepromatous1BeFree
umls:C0024301Lymphoma, Follicular1BeFree
umls:C0024530Malaria1BeFree
umls:C0026769Multiple Sclerosis1BeFree
umls:C0026946Mycoses1BeFree
umls:C0029925Ovarian Carcinoma1BeFree
umls:C0032269Pneumococcal Infections1GAD
umls:C0032787Postoperative Complications1GAD
umls:C0033860Psoriasis1BeFree
umls:C0038454Cerebrovascular accident1GAD
umls:C0079744Diffuse Large B-Cell Lymphoma1BeFree
umls:C0079745Lymphoma, Large-Cell, Follicular1BeFree
umls:C0206171Community-Acquired Infections1GAD
umls:C0206750Coronavirus Infections1BeFree
umls:C0231218Malaise1BeFree
umls:C0236642Pick Disease of the Brain1BeFree
umls:C0242383Age related macular degeneration1GAD
umls:C0338451Frontotemporal dementia1BeFree
umls:C0343804Chronic Chagas' disease1BeFree
umls:C0497327Dementia1GAD
umls:C0856825Acute GVH disease1BeFree
umls:C1140680Malignant neoplasm of ovary1BeFree
umls:C1175175Severe Acute Respiratory Syndrome1BeFree
umls:C1527249Colorectal Cancer1BeFree,GAD
umls:C1704430Urinary Schistosomiasis1BeFree
umls:C1960469Left ventricular noncompaction1BeFree
umls:C3151085MASP2 Deficiency1CLINVAR,CTD_human,ORPHANET,UNIPROT
umls:C3714514Infection1LHGDN
umls:C3714636Pneumonitis1BeFree